FFCP PHASE1:Mm9::chr7:97278737..97278789,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=233489|HGNC=|UniProt=Q7M6Y3,Q3TD51|association_with_transcript=0bp_to_ENSMUST00000049537,NM_001252520,NM_001252521,NM_001252522,NM_001252523,NM_001252524,NM_146194,uc009igp.1,uc009igq.1,uc009igr.1,uc009igs.1,uc009igt.1,uc009igu.1,uc009igv.1_5end|description=CAGE_peak_1_at_Picalm_5end|id=chr7:97278737..97278789,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004923!9.16e-09!24;UBERON:0004119!1.68e-08!130;UBERON:0000925!1.68e-08!130;UBERON:0006595!1.68e-08!130;UBERON:0001007!1.75e-08!128;UBERON:0001555!1.75e-08!128;UBERON:0007026!1.75e-08!128;UBERON:0004921!7.25e-08!126;UBERON:0004185!7.25e-08!126;UBERON:0005911!4.44e-07!69|ontology_enrichment_uberon_v019_2=UBERON:0004119,8.39e-10,118;UBERON:0000925,8.39e-10,118;UBERON:0006595,8.39e-10,118;UBERON:0001007,8.45e-10,116;UBERON:0001555,8.45e-10,116;UBERON:0007026,8.45e-10,116;UBERON:0004921,3.96e-09,114;UBERON:0004923,9.16e-09,24;UBERON:0005911,4.44e-07,69|phase1_expression=46.9236122017046,363.981350167854,284.82952385785,487.269844415303,460.323175820693,143.03313966893,124.515537437415,49.1959862312406,145.29396126052,180.229685267935,62.6657763705348,86.8718811459213,51.3602189793617,54.3754903046164,126.581709489952,165.219818190098,206.370754047803,42.429661240683,55.8055744775357,36.0731204028326,53.3221429247208,35.446869578716,28.9931765944218,124.154120087684,107.134134258368,240.603192964193,200.735090210129,163.327194375904,140.42730697826,128.283336047805,71.1754939203528,31.1165029995219,30.1381745916439,15.8481681015439,74.8125695155801,57.8496565847553,80.0343876548487,189.594828723819,96.8855827209512,99.9930350989955,157.057807304281,180.32400802903,83.9932910743896,34.4957281253082,41.0576571439034,50.4753568444624,36.7723931843578,21.1484401689033,15.5977189741475,28.5811951639197,29.1171756980754,10.062679505548,106.038607028489,126.938374851985,128.387831272421,124.513567041398,149.283922208092,143.356841653129,44.9142543108307,47.0801971552109,72.8906114032106,23.7191172448392,19.5644855144451,55.7937824714467,60.3208481165854,51.8650483910653,35.6524131516902,26.5110630671873,57.2366659942797,55.2174287776615,52.3709153764941,43.7046006137819,42.848496944613,47.1589576977573,44.6639894944981,45.041720543891,77.0811166995721,59.7576742238679,66.9724484997221,48.4022675969811,53.3372962202048,45.8403766089949,58.0700637922872,37.1423322620909,56.9937464207502,62.4612601204175,59.7961059356232,52.1918448310842,77.77080055318,77.158562869028,68.408019333596,37.858650587181,159.793263421321,57.7482415052464,76.0238408413773,64.5158717420163,68.5368770242949,57.2645883862274,43.644048773282,40.6340510686891,52.2529087371485,177.090538831759,303.218235250908,348.422684545132,54.555742334826,63.3399663687746,54.5966400615966,102.651307867435,101.503650389691,65.0176569103932,41.6364784238726,57.8484408793068,46.8149459429799,48.3819676173918,61.9692486605164,39.3336430861884,90.9677481262496,129.705623157161,125.614698376882,72.3097819264919,107.991502527132,121.218813283806,67.101034038524,68.510706500702,61.7867785099692,100.394622696976,36.4237978497998,27.5955256256968,32.4029079036315,51.2283986764494,62.2200819833332,51.895247422613,53.7117149394134,52.4216687527178,60.466320966832,58.4068547043927,64.1587992256993,94.1760767518404,39.4247503156533,66.0787427483528,44.2409506073193,44.1412040512268,52.3980797733566,51.0889332463074,58.0351337760827,60.7259034150188,48.5374933219395,72.6956471776634,50.8740463321508,74.1295834257852,61.0550400848903,62.4707837418588,69.7898595556251,79.0532418005318,65.8502836505419,46.5740184355274,19.6619692447706,26.2494865257009,25.0063879468122,70.4227626620706,75.9864434338752,53.2983701924604,82.6239127192384,59.6195622194634,61.7068451549513,62.5516311378597,64.3856163359086,82.2028010264873,53.4819512218811,67.308660272429,76.2046809731044,91.2287921534074,75.0861394295393,64.9559066800199,55.7268363694937,54.0249214991243,165.209391491899,107.631380632063,55.2416568886256,56.665747933947,68.0420195780653,68.5723983719365,60.4868279258047,75.1391223144609,103.921864478248,64.2325923423642,65.0958190792698,68.4410263821559,69.797143188645,87.1854826394595,88.6166004486246,94.9903873423332,47.2273073373173,58.2667414309617,77.7683376144255,73.5181293521584,80.1023772002294,69.9955482505379,95.2974614462557,110.855221132681,108.329122210549,95.6328020393954,56.0295465194711,213.728580422316,177.689331582336,207.09800550645,236.534901538994,206.206471588316,145.136735515409,152.47895284893,121.925690534827,93.0763190707596,250.156679357597,82.6152903824077,65.8399490271723,57.8405630498886,68.7092093788924,92.6291561017665,86.2797398078044,47.5623443543917,66.8156403412306,62.4661915652692,77.4477819352057,111.391661198807,112.594642139084,98.932759463904,116.492371494475,116.933356134553,105.240147313941,80.9484774695746,78.3989817671166,91.9968012578414,117.617201472632,71.7955502640697,30.9811492001993,50.2204878274613,72.568866674482,68.3344132832544,47.7050691046125,57.3109004753927,52.0588562036824,42.9482618726302,65.4887129107709,53.0510731454666,55.4768698465161,67.6552908585309,53.0302019194112,60.2047067297302,66.408346695016,53.0180172095982,70.5442223485095,46.4751225571536,62.8743663104804,68.4626010336022,84.9568885375762,48.5561272309963,37.4881210636291,48.8487156567776,52.5637369327776,75.3216112462622,74.9442050187841,65.0725375764735,64.1695281092498,71.1082705355586,67.4679094879992,50.5364161916116,59.2364914011591,49.5168008586103,31.0460841078611,37.7233181655602,68.4533301859176,54.9375958214377,54.7948238605063,22.8348711835949,61.7186592207558,76.6832096527029,36.8282424751786,103.218794341367,74.2736362801165,64.4745167481986,64.4610657616937,75.8330956822183,85.6953659691761,74.1701208042039,180.439650122532,73.8864987308337,118.709692043985,218.319041668437,234.977377452442,172.956298944131,47.0840251082979,53.4614547876374,52.1013901242678,44.8695190467103,56.7823108478138,70.1452161587628,63.2911297215755,58.3356345880368,66.6005819425842,68.9156810026434,72.7350410382956,51.0424086868858,81.9166631204131,61.5125919956056,27.6209539955253,57.8629033190198,35.9044924291902,43.7515173774107,42.2352622772181,51.7005744001781,53.6322580611096,43.8788776924112,51.5907974574497,32.6138563115108,34.8516307572017,77.7387356745319,33.6523857381673,38.619319893975,50.4092793153845,53.8870353959119,64.5714403039111,60.8188974571042,54.6451250545936,59.5702054694071,57.3075186045599,65.8394988943569,65.6866116185931,71.1967628138438,85.9045231034532,47.8401109428096,57.7163478772568,53.1106031128096,71.6867311874615,74.5711832964255,73.196165425961,68.8650107244917,55.7357785605571,83.2609692698703,63.8169582157285,34.9847179745454,45.8316410751517,44.1662678623277,39.7347861466973,34.7481192799262,38.4762825132129,34.2244114450408,27.6416869480365,35.7254615108756,59.9890869036541,65.8391041111701,71.5373808109822,80.9545367837419,93.4874705320801,87.3256665137567,91.7878985820671,86.9467941548134,85.6854289610147,90.9709962349671,100.884761356315,92.0496545964052,92.5178093802438,97.95848317945,83.9706556131066,90.495801343784,78.8013416425017,78.1282342878005,77.4721493510216,111.13518470147,96.3462599203017,81.9938224456139,92.0363693196659,84.5916144800152,96.1797867844679,83.0069303417346,81.4029479283838,76.0271466055366,96.6925290582536,91.4661902802114,81.8581625056802,71.8097676517858,78.98159133175,88.1590626348146,85.8434418866079,61.4534021727347,80.2385416967751,102.493492781038,100.043797672005,88.6777504860452,89.0372488782418|short_description=p1@Picalm}} | ||
|EntrezGene=233489 | |||
|HGNC= | |||
|UniProt=Q7M6Y3,Q3TD51 | |||
|association_with_transcript=0bp_to_ENSMUST00000049537,NM_001252520,NM_001252521,NM_001252522,NM_001252523,NM_001252524,NM_146194,uc009igp.1,uc009igq.1,uc009igr.1,uc009igs.1,uc009igt.1,uc009igu.1,uc009igv.1_5end | |||
|description=CAGE_peak_1_at_Picalm_5end | |||
|id=chr7:97278737..97278789,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!9.16e-09!24;UBERON:0004119!1.68e-08!130;UBERON:0000925!1.68e-08!130;UBERON:0006595!1.68e-08!130;UBERON:0001007!1.75e-08!128;UBERON:0001555!1.75e-08!128;UBERON:0007026!1.75e-08!128;UBERON:0004921!7.25e-08!126;UBERON:0004185!7.25e-08!126;UBERON:0005911!4.44e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,8.39e-10,118;UBERON:0000925,8.39e-10,118;UBERON:0006595,8.39e-10,118;UBERON:0001007,8.45e-10,116;UBERON:0001555,8.45e-10,116;UBERON:0007026,8.45e-10,116;UBERON:0004921,3.96e-09,114;UBERON:0004923,9.16e-09,24;UBERON:0005911,4.44e-07,69 | |||
|phase1_expression=46.9236122017046,363.981350167854,284.82952385785,487.269844415303,460.323175820693,143.03313966893,124.515537437415,49.1959862312406,145.29396126052,180.229685267935,62.6657763705348,86.8718811459213,51.3602189793617,54.3754903046164,126.581709489952,165.219818190098,206.370754047803,42.429661240683,55.8055744775357,36.0731204028326,53.3221429247208,35.446869578716,28.9931765944218,124.154120087684,107.134134258368,240.603192964193,200.735090210129,163.327194375904,140.42730697826,128.283336047805,71.1754939203528,31.1165029995219,30.1381745916439,15.8481681015439,74.8125695155801,57.8496565847553,80.0343876548487,189.594828723819,96.8855827209512,99.9930350989955,157.057807304281,180.32400802903,83.9932910743896,34.4957281253082,41.0576571439034,50.4753568444624,36.7723931843578,21.1484401689033,15.5977189741475,28.5811951639197,29.1171756980754,10.062679505548,106.038607028489,126.938374851985,128.387831272421,124.513567041398,149.283922208092,143.356841653129,44.9142543108307,47.0801971552109,72.8906114032106,23.7191172448392,19.5644855144451,55.7937824714467,60.3208481165854,51.8650483910653,35.6524131516902,26.5110630671873,57.2366659942797,55.2174287776615,52.3709153764941,43.7046006137819,42.848496944613,47.1589576977573,44.6639894944981,45.041720543891,77.0811166995721,59.7576742238679,66.9724484997221,48.4022675969811,53.3372962202048,45.8403766089949,58.0700637922872,37.1423322620909,56.9937464207502,62.4612601204175,59.7961059356232,52.1918448310842,77.77080055318,77.158562869028,68.408019333596,37.858650587181,159.793263421321,57.7482415052464,76.0238408413773,64.5158717420163,68.5368770242949,57.2645883862274,43.644048773282,40.6340510686891,52.2529087371485,177.090538831759,303.218235250908,348.422684545132,54.555742334826,63.3399663687746,54.5966400615966,102.651307867435,101.503650389691,65.0176569103932,41.6364784238726,57.8484408793068,46.8149459429799,48.3819676173918,61.9692486605164,39.3336430861884,90.9677481262496,129.705623157161,125.614698376882,72.3097819264919,107.991502527132,121.218813283806,67.101034038524,68.510706500702,61.7867785099692,100.394622696976,36.4237978497998,27.5955256256968,32.4029079036315,51.2283986764494,62.2200819833332,51.895247422613,53.7117149394134,52.4216687527178,60.466320966832,58.4068547043927,64.1587992256993,94.1760767518404,39.4247503156533,66.0787427483528,44.2409506073193,44.1412040512268,52.3980797733566,51.0889332463074,58.0351337760827,60.7259034150188,48.5374933219395,72.6956471776634,50.8740463321508,74.1295834257852,61.0550400848903,62.4707837418588,69.7898595556251,79.0532418005318,65.8502836505419,46.5740184355274,19.6619692447706,26.2494865257009,25.0063879468122,70.4227626620706,75.9864434338752,53.2983701924604,82.6239127192384,59.6195622194634,61.7068451549513,62.5516311378597,64.3856163359086,82.2028010264873,53.4819512218811,67.308660272429,76.2046809731044,91.2287921534074,75.0861394295393,64.9559066800199,55.7268363694937,54.0249214991243,165.209391491899,107.631380632063,55.2416568886256,56.665747933947,68.0420195780653,68.5723983719365,60.4868279258047,75.1391223144609,103.921864478248,64.2325923423642,65.0958190792698,68.4410263821559,69.797143188645,87.1854826394595,88.6166004486246,94.9903873423332,47.2273073373173,58.2667414309617,77.7683376144255,73.5181293521584,80.1023772002294,69.9955482505379,95.2974614462557,110.855221132681,108.329122210549,95.6328020393954,56.0295465194711,213.728580422316,177.689331582336,207.09800550645,236.534901538994,206.206471588316,145.136735515409,152.47895284893,121.925690534827,93.0763190707596,250.156679357597,82.6152903824077,65.8399490271723,57.8405630498886,68.7092093788924,92.6291561017665,86.2797398078044,47.5623443543917,66.8156403412306,62.4661915652692,77.4477819352057,111.391661198807,112.594642139084,98.932759463904,116.492371494475,116.933356134553,105.240147313941,80.9484774695746,78.3989817671166,91.9968012578414,117.617201472632,71.7955502640697,30.9811492001993,50.2204878274613,72.568866674482,68.3344132832544,47.7050691046125,57.3109004753927,52.0588562036824,42.9482618726302,65.4887129107709,53.0510731454666,55.4768698465161,67.6552908585309,53.0302019194112,60.2047067297302,66.408346695016,53.0180172095982,70.5442223485095,46.4751225571536,62.8743663104804,68.4626010336022,84.9568885375762,48.5561272309963,37.4881210636291,48.8487156567776,52.5637369327776,75.3216112462622,74.9442050187841,65.0725375764735,64.1695281092498,71.1082705355586,67.4679094879992,50.5364161916116,59.2364914011591,49.5168008586103,31.0460841078611,37.7233181655602,68.4533301859176,54.9375958214377,54.7948238605063,22.8348711835949,61.7186592207558,76.6832096527029,36.8282424751786,103.218794341367,74.2736362801165,64.4745167481986,64.4610657616937,75.8330956822183,85.6953659691761,74.1701208042039,180.439650122532,73.8864987308337,118.709692043985,218.319041668437,234.977377452442,172.956298944131,47.0840251082979,53.4614547876374,52.1013901242678,44.8695190467103,56.7823108478138,70.1452161587628,63.2911297215755,58.3356345880368,66.6005819425842,68.9156810026434,72.7350410382956,51.0424086868858,81.9166631204131,61.5125919956056,27.6209539955253,57.8629033190198,35.9044924291902,43.7515173774107,42.2352622772181,51.7005744001781,53.6322580611096,43.8788776924112,51.5907974574497,32.6138563115108,34.8516307572017,77.7387356745319,33.6523857381673,38.619319893975,50.4092793153845,53.8870353959119,64.5714403039111,60.8188974571042,54.6451250545936,59.5702054694071,57.3075186045599,65.8394988943569,65.6866116185931,71.1967628138438,85.9045231034532,47.8401109428096,57.7163478772568,53.1106031128096,71.6867311874615,74.5711832964255,73.196165425961,68.8650107244917,55.7357785605571,83.2609692698703,63.8169582157285,34.9847179745454,45.8316410751517,44.1662678623277,39.7347861466973,34.7481192799262,38.4762825132129,34.2244114450408,27.6416869480365,35.7254615108756,59.9890869036541,65.8391041111701,71.5373808109822,80.9545367837419,93.4874705320801,87.3256665137567,91.7878985820671,86.9467941548134,85.6854289610147,90.9709962349671,100.884761356315,92.0496545964052,92.5178093802438,97.95848317945,83.9706556131066,90.495801343784,78.8013416425017,78.1282342878005,77.4721493510216,111.13518470147,96.3462599203017,81.9938224456139,92.0363693196659,84.5916144800152,96.1797867844679,83.0069303417346,81.4029479283838,76.0271466055366,96.6925290582536,91.4661902802114,81.8581625056802,71.8097676517858,78.98159133175,88.1590626348146,85.8434418866079,61.4534021727347,80.2385416967751,102.493492781038,100.043797672005,88.6777504860452,89.0372488782418 | |||
|short_description=p1@Picalm | |||
}} |
Revision as of 14:27, 14 September 2013
Short description: | p1@Picalm |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Picalm_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000049537, NM_001252520, NM_001252521, NM_001252522, NM_001252523, NM_001252524, NM_146194, uc009igp.1, uc009igq.1, uc009igr.1, uc009igs.1, uc009igt.1, uc009igu.1, uc009igv.1_5end |
EntrezGene: | Picalm |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 8.39e-10 | 118 |
endoderm | 8.39e-10 | 118 |
presumptive endoderm | 8.39e-10 | 118 |
digestive system | 8.45e-10 | 116 |
digestive tract | 8.45e-10 | 116 |
primitive gut | 8.45e-10 | 116 |
subdivision of digestive tract | 3.96e-09 | 114 |
organ component layer | 9.16e-09 | 24 |
endo-epithelium | 4.44e-07 | 69 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.