FFCP PHASE1:Mm9::chr7:80554269..80554280,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=87|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:80554269..80554280,+|id=chr7:80554269..80554280,+|ontology_enrichment_celltype=CL:0000117!7.02e-17!23;CL:0000337!7.02e-17!23;CL:0000055!1.08e-16!50;CL:0000221!1.45e-16!44;CL:0000133!1.45e-16!44;CL:0002319!5.25e-16!43;CL:0000393!8.53e-13!39;CL:0000211!8.53e-13!39;CL:0000540!1.89e-11!33;CL:0000047!1.89e-11!33;CL:0000031!1.89e-11!33;CL:0000404!1.89e-11!33;CL:0002321!9.29e-08!70;CL:0000220!9.29e-08!70;CL:0002453!3.38e-07!8|ontology_enrichment_celltype_v019_2=CL:0002319,2.55e-36,43;CL:0000221,2.25e-35,44;CL:0000133,2.25e-35,44;CL:0000117,2.15e-32,23;CL:0000337,2.15e-32,23;CL:0000540,2.07e-21,33;CL:0000047,2.07e-21,33;CL:0000031,2.07e-21,33;CL:0000404,2.07e-21,33;CL:0002453,3.13e-21,8;CL:0002321,2.96e-20,70;CL:0000393,1.59e-17,39;CL:0000211,1.59e-17,39;CL:0000333,9.98e-17,10;CL:0000095,9.98e-17,10;CL:0000243,9.98e-17,10;CL:0000123,9.98e-17,10;CL:0000125,9.98e-17,10;CL:0000030,9.98e-17,10;CL:0000339,9.98e-17,10;CL:0000128,9.55e-16,6;CL:0000126,9.55e-16,6;CL:0000127,9.55e-16,6;CL:0002612,8.64e-10,3;CL:0000120,2.61e-09,3;CL:0002610,7.16e-09,3;CL:0002613,7.16e-09,3;CL:0000723,2.83e-07,91;CL:0000048,2.83e-07,91;CL:0000878,4.21e-07,2;CL:0000129,4.21e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.30e-23!73;UBERON:0005743!2.30e-23!73;UBERON:0000073!1.44e-22!75;UBERON:0001016!1.44e-22!75;UBERON:0001049!2.99e-20!52;UBERON:0005068!2.99e-20!52;UBERON:0006241!2.99e-20!52;UBERON:0007135!2.99e-20!52;UBERON:0002020!2.80e-19!34;UBERON:0002616!1.60e-18!49;UBERON:0000955!9.45e-18!50;UBERON:0006238!9.45e-18!50;UBERON:0004121!5.95e-16!102;UBERON:0000924!5.95e-16!102;UBERON:0006601!5.95e-16!102;UBERON:0002791!2.26e-15!29;UBERON:0003528!2.26e-15!29;UBERON:0001893!2.26e-15!29;UBERON:0000033!2.47e-15!63;UBERON:0003080!1.45e-14!40;UBERON:0002780!2.71e-14!39;UBERON:0001890!2.71e-14!39;UBERON:0006240!2.71e-14!39;UBERON:0002346!1.22e-12!71;UBERON:0003075!1.22e-12!71;UBERON:0007284!1.22e-12!71;UBERON:0003056!5.41e-12!49;UBERON:0000956!1.08e-10!21;UBERON:0001869!1.08e-10!21;UBERON:0000203!1.08e-10!21;UBERON:0000025!2.46e-09!114;UBERON:0002619!7.75e-09!17;UBERON:0004111!1.29e-08!122;UBERON:0007811!9.13e-08!86;UBERON:0000153!3.37e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.33e-33,73;UBERON:0001016,1.50e-32,75;UBERON:0002020,4.39e-28,34;UBERON:0000073,1.04e-26,54;UBERON:0004121,1.86e-24,95;UBERON:0000924,1.86e-24,95;UBERON:0006601,1.86e-24,95;UBERON:0001049,7.04e-21,52;UBERON:0005068,7.04e-21,52;UBERON:0006241,7.04e-21,52;UBERON:0007135,7.04e-21,52;UBERON:0003528,1.14e-17,29;UBERON:0002791,1.14e-17,29;UBERON:0001893,1.14e-17,29;UBERON:0002346,4.58e-16,64;UBERON:0003075,4.58e-16,64;UBERON:0007284,4.58e-16,64;UBERON:0001948,1.30e-14,5;UBERON:0002315,1.30e-14,5;UBERON:0010371,1.70e-13,73;UBERON:0002616,3.24e-13,46;UBERON:0000955,7.41e-13,47;UBERON:0006238,7.41e-13,47;UBERON:0002780,2.56e-12,39;UBERON:0001890,2.56e-12,39;UBERON:0006240,2.56e-12,39;UBERON:0002240,4.02e-12,6;UBERON:0005174,4.02e-12,6;UBERON:0001137,4.02e-12,6;UBERON:0002021,5.98e-12,10;UBERON:0000411,5.98e-12,10;UBERON:0001950,5.98e-12,10;UBERON:0003080,6.25e-12,40;UBERON:0002619,7.02e-11,17;UBERON:0003076,7.74e-11,12;UBERON:0003057,7.74e-11,12;UBERON:0000956,1.04e-10,21;UBERON:0001869,1.04e-10,21;UBERON:0000203,1.04e-10,21;UBERON:0002257,8.64e-10,3;UBERON:0011216,9.64e-10,194;UBERON:0010314,9.97e-10,92;UBERON:0003056,3.66e-09,49;UBERON:0004684,7.16e-09,3;UBERON:0002275,7.16e-09,3;UBERON:0002420,1.28e-08,8;UBERON:0007245,1.28e-08,8;UBERON:0010009,1.28e-08,8;UBERON:0010011,1.28e-08,8;UBERON:0000454,1.28e-08,8;UBERON:0000025,8.48e-08,114;UBERON:0004111,5.72e-07,122|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.811015449756117,0.367093504323363,2.34717403304412,1.52617609466313,1.5378032791413,1.55543919259427,1.67983705950435,4.31257693094915,0,0,0,0.514518872071894,0.286533439938757,0,2.22548106945558,5.28990979272033,1.90149421051854,0.677689064138264,0.889294796111139,0,0,0,3.59520132622086,3.07374644257244,0.518448061542388,2.43010688997043,0.420649922702764,1.99955689082663,1.98781686856452,0.489963196859816,0.958454710182364,0.919218786610021,5.50579404996943,1.14918604276669,1.84327839907492,1.71452174049252,2.92760459527711,1.56274011167028,2.79182999001381,2.25105044012672,0.61119299110724,4.71405736757868,3.27454865837937,2.60959224155421,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0,0,0.704217098883403,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0.289198713839823,0,0,0.220841518460394,0,0,0.585561594023094,0.209446706813455,0,0,0,0,0.299581278809645,0.457500602818626,0.251308704225729,0.347648640384553,0,0.83115217823824,0.486723789203273,0.101839363850316,0.124406970610093,0.252722758433675,0,0.130120442962704,0.459804208866946,0,0,0.0680364991513279,0.512454881139399,0,0,0.215567992932842,0.189106080167819,0.175951124163949,0,0,0,0.205782136407943,0.59710280045548,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0.329119699826961,0,0.162137619091711,0.146199987425332,0.439100230582101,0,0.210289948564127,0.205809224758569,0,0.264450566663544,0,0.464473343720877,0.128867461322093,0,0.667134131534611,0,0,0,0,0,0,0.898819408654221,0,0,0.379335801906163,0.114248512609729,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0,0,0.339490171550376,0.234690248288502,0.335012514883631,0.238043640886014,0.390267295715598,0,0.44292937929755,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0.160550589987792,0.117211686592203,0.163934945376675,0.504941854408746,0,0,0.215423397732799,0.238968797952552,0,0,0,0.292255857911312,0,0,0.141940085208269,0.178065603667255,0.488660878060728,0.164970122972535,0,0,0,0.377210159511796,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0,0.129358683782755,0.214337035031592,0,0.356737635204141,0.164549020602121,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0.180938774784468,0,0.656563598980245,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0,0.432021363287205,0.627264888043406,0.218362563746178,0,0.495920734352016,0,0,0,0,0.448549638131936,0.165458490457098,0,0.387479470433193,0.168956125490778,0.234714477291508,0,0.104859344425711,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0,0,0.147689527174577,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0.183151624267265,0,0,1.6942555278512,0.920650473014354,2.86447756719698,1.54667864109319,1.37016503954128,2.2661816921691,0,1.35096360967266,0.453142408984205,1.03552062350364,0.207574695168353,0,0,0.243106717068294,0,0.183843508450014,0,0.618105171716683,0.320919209591815,0.252697211763798,0.50695859978048,0.565879024158229,0.187283014939765,0.320125762024346,0.17230640686684,0,0.231768651889711,0.192909220463705,0,0.294397840268795,0.342869252385415,0.177475806159338,0.715308569841963,0.290692833264657,0.0941093804153306,0.169229215783353,0,0.263069711437843,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.385813221962283,0.749431733813838,0.233931608445408,0,0.191288332068843,0.220591419119515,0|short_description=p@chr7:80554269..80554280,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=87 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:80554269..80554280,+ | |||
|id=chr7:80554269..80554280,+ | |||
|ontology_enrichment_celltype=CL:0000117!7.02e-17!23;CL:0000337!7.02e-17!23;CL:0000055!1.08e-16!50;CL:0000221!1.45e-16!44;CL:0000133!1.45e-16!44;CL:0002319!5.25e-16!43;CL:0000393!8.53e-13!39;CL:0000211!8.53e-13!39;CL:0000540!1.89e-11!33;CL:0000047!1.89e-11!33;CL:0000031!1.89e-11!33;CL:0000404!1.89e-11!33;CL:0002321!9.29e-08!70;CL:0000220!9.29e-08!70;CL:0002453!3.38e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.55e-36,43;CL:0000221,2.25e-35,44;CL:0000133,2.25e-35,44;CL:0000117,2.15e-32,23;CL:0000337,2.15e-32,23;CL:0000540,2.07e-21,33;CL:0000047,2.07e-21,33;CL:0000031,2.07e-21,33;CL:0000404,2.07e-21,33;CL:0002453,3.13e-21,8;CL:0002321,2.96e-20,70;CL:0000393,1.59e-17,39;CL:0000211,1.59e-17,39;CL:0000333,9.98e-17,10;CL:0000095,9.98e-17,10;CL:0000243,9.98e-17,10;CL:0000123,9.98e-17,10;CL:0000125,9.98e-17,10;CL:0000030,9.98e-17,10;CL:0000339,9.98e-17,10;CL:0000128,9.55e-16,6;CL:0000126,9.55e-16,6;CL:0000127,9.55e-16,6;CL:0002612,8.64e-10,3;CL:0000120,2.61e-09,3;CL:0002610,7.16e-09,3;CL:0002613,7.16e-09,3;CL:0000723,2.83e-07,91;CL:0000048,2.83e-07,91;CL:0000878,4.21e-07,2;CL:0000129,4.21e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.30e-23!73;UBERON:0005743!2.30e-23!73;UBERON:0000073!1.44e-22!75;UBERON:0001016!1.44e-22!75;UBERON:0001049!2.99e-20!52;UBERON:0005068!2.99e-20!52;UBERON:0006241!2.99e-20!52;UBERON:0007135!2.99e-20!52;UBERON:0002020!2.80e-19!34;UBERON:0002616!1.60e-18!49;UBERON:0000955!9.45e-18!50;UBERON:0006238!9.45e-18!50;UBERON:0004121!5.95e-16!102;UBERON:0000924!5.95e-16!102;UBERON:0006601!5.95e-16!102;UBERON:0002791!2.26e-15!29;UBERON:0003528!2.26e-15!29;UBERON:0001893!2.26e-15!29;UBERON:0000033!2.47e-15!63;UBERON:0003080!1.45e-14!40;UBERON:0002780!2.71e-14!39;UBERON:0001890!2.71e-14!39;UBERON:0006240!2.71e-14!39;UBERON:0002346!1.22e-12!71;UBERON:0003075!1.22e-12!71;UBERON:0007284!1.22e-12!71;UBERON:0003056!5.41e-12!49;UBERON:0000956!1.08e-10!21;UBERON:0001869!1.08e-10!21;UBERON:0000203!1.08e-10!21;UBERON:0000025!2.46e-09!114;UBERON:0002619!7.75e-09!17;UBERON:0004111!1.29e-08!122;UBERON:0007811!9.13e-08!86;UBERON:0000153!3.37e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.33e-33,73;UBERON:0001016,1.50e-32,75;UBERON:0002020,4.39e-28,34;UBERON:0000073,1.04e-26,54;UBERON:0004121,1.86e-24,95;UBERON:0000924,1.86e-24,95;UBERON:0006601,1.86e-24,95;UBERON:0001049,7.04e-21,52;UBERON:0005068,7.04e-21,52;UBERON:0006241,7.04e-21,52;UBERON:0007135,7.04e-21,52;UBERON:0003528,1.14e-17,29;UBERON:0002791,1.14e-17,29;UBERON:0001893,1.14e-17,29;UBERON:0002346,4.58e-16,64;UBERON:0003075,4.58e-16,64;UBERON:0007284,4.58e-16,64;UBERON:0001948,1.30e-14,5;UBERON:0002315,1.30e-14,5;UBERON:0010371,1.70e-13,73;UBERON:0002616,3.24e-13,46;UBERON:0000955,7.41e-13,47;UBERON:0006238,7.41e-13,47;UBERON:0002780,2.56e-12,39;UBERON:0001890,2.56e-12,39;UBERON:0006240,2.56e-12,39;UBERON:0002240,4.02e-12,6;UBERON:0005174,4.02e-12,6;UBERON:0001137,4.02e-12,6;UBERON:0002021,5.98e-12,10;UBERON:0000411,5.98e-12,10;UBERON:0001950,5.98e-12,10;UBERON:0003080,6.25e-12,40;UBERON:0002619,7.02e-11,17;UBERON:0003076,7.74e-11,12;UBERON:0003057,7.74e-11,12;UBERON:0000956,1.04e-10,21;UBERON:0001869,1.04e-10,21;UBERON:0000203,1.04e-10,21;UBERON:0002257,8.64e-10,3;UBERON:0011216,9.64e-10,194;UBERON:0010314,9.97e-10,92;UBERON:0003056,3.66e-09,49;UBERON:0004684,7.16e-09,3;UBERON:0002275,7.16e-09,3;UBERON:0002420,1.28e-08,8;UBERON:0007245,1.28e-08,8;UBERON:0010009,1.28e-08,8;UBERON:0010011,1.28e-08,8;UBERON:0000454,1.28e-08,8;UBERON:0000025,8.48e-08,114;UBERON:0004111,5.72e-07,122 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.811015449756117,0.367093504323363,2.34717403304412,1.52617609466313,1.5378032791413,1.55543919259427,1.67983705950435,4.31257693094915,0,0,0,0.514518872071894,0.286533439938757,0,2.22548106945558,5.28990979272033,1.90149421051854,0.677689064138264,0.889294796111139,0,0,0,3.59520132622086,3.07374644257244,0.518448061542388,2.43010688997043,0.420649922702764,1.99955689082663,1.98781686856452,0.489963196859816,0.958454710182364,0.919218786610021,5.50579404996943,1.14918604276669,1.84327839907492,1.71452174049252,2.92760459527711,1.56274011167028,2.79182999001381,2.25105044012672,0.61119299110724,4.71405736757868,3.27454865837937,2.60959224155421,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0,0,0.704217098883403,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0.289198713839823,0,0,0.220841518460394,0,0,0.585561594023094,0.209446706813455,0,0,0,0,0.299581278809645,0.457500602818626,0.251308704225729,0.347648640384553,0,0.83115217823824,0.486723789203273,0.101839363850316,0.124406970610093,0.252722758433675,0,0.130120442962704,0.459804208866946,0,0,0.0680364991513279,0.512454881139399,0,0,0.215567992932842,0.189106080167819,0.175951124163949,0,0,0,0.205782136407943,0.59710280045548,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0.329119699826961,0,0.162137619091711,0.146199987425332,0.439100230582101,0,0.210289948564127,0.205809224758569,0,0.264450566663544,0,0.464473343720877,0.128867461322093,0,0.667134131534611,0,0,0,0,0,0,0.898819408654221,0,0,0.379335801906163,0.114248512609729,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0,0,0.339490171550376,0.234690248288502,0.335012514883631,0.238043640886014,0.390267295715598,0,0.44292937929755,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0.160550589987792,0.117211686592203,0.163934945376675,0.504941854408746,0,0,0.215423397732799,0.238968797952552,0,0,0,0.292255857911312,0,0,0.141940085208269,0.178065603667255,0.488660878060728,0.164970122972535,0,0,0,0.377210159511796,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0,0.129358683782755,0.214337035031592,0,0.356737635204141,0.164549020602121,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0.180938774784468,0,0.656563598980245,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0,0.432021363287205,0.627264888043406,0.218362563746178,0,0.495920734352016,0,0,0,0,0.448549638131936,0.165458490457098,0,0.387479470433193,0.168956125490778,0.234714477291508,0,0.104859344425711,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0,0,0.147689527174577,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0.183151624267265,0,0,1.6942555278512,0.920650473014354,2.86447756719698,1.54667864109319,1.37016503954128,2.2661816921691,0,1.35096360967266,0.453142408984205,1.03552062350364,0.207574695168353,0,0,0.243106717068294,0,0.183843508450014,0,0.618105171716683,0.320919209591815,0.252697211763798,0.50695859978048,0.565879024158229,0.187283014939765,0.320125762024346,0.17230640686684,0,0.231768651889711,0.192909220463705,0,0.294397840268795,0.342869252385415,0.177475806159338,0.715308569841963,0.290692833264657,0.0941093804153306,0.169229215783353,0,0.263069711437843,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.385813221962283,0.749431733813838,0.233931608445408,0,0.191288332068843,0.220591419119515,0 | |||
|short_description=p@chr7:80554269..80554280,+ | |||
}} |
Revision as of 14:10, 14 September 2013
Short description: | p@chr7:80554269..80554280, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:80554269..80554280, + |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.55e-36 | 43 |
ectodermal cell | 2.25e-35 | 44 |
neurectodermal cell | 2.25e-35 | 44 |
CNS neuron (sensu Vertebrata) | 2.15e-32 | 23 |
neuroblast (sensu Vertebrata) | 2.15e-32 | 23 |
neuron | 2.07e-21 | 33 |
neuronal stem cell | 2.07e-21 | 33 |
neuroblast | 2.07e-21 | 33 |
electrically signaling cell | 2.07e-21 | 33 |
oligodendrocyte precursor cell | 3.13e-21 | 8 |
embryonic cell | 2.96e-20 | 70 |
electrically responsive cell | 1.59e-17 | 39 |
electrically active cell | 1.59e-17 | 39 |
migratory neural crest cell | 9.98e-17 | 10 |
neuron associated cell | 9.98e-17 | 10 |
glial cell (sensu Vertebrata) | 9.98e-17 | 10 |
neuron associated cell (sensu Vertebrata) | 9.98e-17 | 10 |
glial cell | 9.98e-17 | 10 |
glioblast | 9.98e-17 | 10 |
glioblast (sensu Vertebrata) | 9.98e-17 | 10 |
oligodendrocyte | 9.55e-16 | 6 |
macroglial cell | 9.55e-16 | 6 |
astrocyte | 9.55e-16 | 6 |
neuron of the ventral spinal cord | 8.64e-10 | 3 |
granule cell | 2.61e-09 | 3 |
raphe nuclei neuron | 7.16e-09 | 3 |
striatum neuron | 7.16e-09 | 3 |
somatic stem cell | 2.83e-07 | 91 |
multi fate stem cell | 2.83e-07 | 91 |
central nervous system macrophage | 4.21e-07 | 2 |
microglial cell | 4.21e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.