FFCP PHASE1:Mm9::chr7:69130787..69130797,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=719|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:69130787..69130797,-|id=chr7:69130787..69130797,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.16e-13!63;UBERON:0002616!2.03e-13!49;UBERON:0000955!6.21e-13!50;UBERON:0006238!6.21e-13!50;UBERON:0003056!8.15e-13!49;UBERON:0002346!1.66e-11!71;UBERON:0003075!1.66e-11!71;UBERON:0007284!1.66e-11!71;UBERON:0003080!2.02e-10!40;UBERON:0001049!3.73e-10!52;UBERON:0005068!3.73e-10!52;UBERON:0006241!3.73e-10!52;UBERON:0007135!3.73e-10!52;UBERON:0002780!6.90e-10!39;UBERON:0001890!6.90e-10!39;UBERON:0006240!6.90e-10!39;UBERON:0002021!1.50e-09!10;UBERON:0000411!1.50e-09!10;UBERON:0001950!1.50e-09!10;UBERON:0001017!4.96e-09!73;UBERON:0005743!4.96e-09!73;UBERON:0002791!8.20e-09!29;UBERON:0003528!8.20e-09!29;UBERON:0001893!8.20e-09!29;UBERON:0000073!1.70e-08!75;UBERON:0001016!1.70e-08!75;UBERON:0002020!1.12e-07!34;UBERON:0000153!1.48e-07!94;UBERON:0007811!2.37e-07!86;UBERON:0004121!3.30e-07!102;UBERON:0000924!3.30e-07!102;UBERON:0006601!3.30e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0002021,5.36e-47,10;UBERON:0000411,5.36e-47,10;UBERON:0001950,5.36e-47,10;UBERON:0002619,1.73e-27,17;UBERON:0000956,3.65e-22,21;UBERON:0001869,3.65e-22,21;UBERON:0000203,3.65e-22,21;UBERON:0003528,6.61e-16,29;UBERON:0002791,6.61e-16,29;UBERON:0001893,6.61e-16,29;UBERON:0002020,1.75e-13,34;UBERON:0002780,1.12e-11,39;UBERON:0001890,1.12e-11,39;UBERON:0006240,1.12e-11,39;UBERON:0003056,1.52e-11,49;UBERON:0003080,2.28e-11,40;UBERON:0000073,1.99e-10,54;UBERON:0002616,8.41e-10,46;UBERON:0000955,1.40e-09,47;UBERON:0006238,1.40e-09,47;UBERON:0002346,1.19e-08,64;UBERON:0003075,1.19e-08,64;UBERON:0007284,1.19e-08,64;UBERON:0001049,1.36e-08,52;UBERON:0005068,1.36e-08,52;UBERON:0006241,1.36e-08,52;UBERON:0007135,1.36e-08,52;UBERON:0001851,2.89e-08,1;UBERON:0005889,2.89e-08,1;UBERON:0001017,1.71e-07,73;UBERON:0010371,1.78e-07,73;UBERON:0001016,2.85e-07,75;UBERON:0004121,6.58e-07,95;UBERON:0000924,6.58e-07,95;UBERON:0006601,6.58e-07,95|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0,0,0.191690942036473,0,1.10115880999389,0.510749352340751,0.153606533256243,0.131886287730194,0.182975287204819,0.52091337055676,0.558365998002762,0,0.61119299110724,0.589257170947335,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0.220841518460394,0.484875253135222,0,0.292780797011547,0.209446706813455,0,0,0,0,0.299581278809645,0,0.502617408451458,0.347648640384553,1.02286182932132,0,0.648965052271031,0.305518091550949,0,0,0,0.390361328888111,0.229902104433473,0,0,0.544291993210623,0.896796041993948,0.187403449119458,1.03481348295606,0.215567992932842,0,0.351902248327898,0,0.556094498451196,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0.462801338662135,0.697601834251224,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,0,0.411618449517138,0,0,0.426576501070468,0.696710015581316,0,0,0,0.380451252225118,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0.407302655690628,0.387904974335251,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0.189491411770485,0,0,0.938760993154008,0,0.238043640886014,0,0.315270288212382,0.44292937929755,0.318909537314974,0.491589944147214,0,0,0,0,0,0,0.160550589987792,0.586058432961016,0,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0.222798674082394,0,0,0,0,0,0,0,0.651547837414304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0.428674070063185,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0.209088296014469,0.436725127492355,0,0,0,0,0,0,0.149516546043979,0,0,0,0.675824501963113,0.352071715937262,0.5208175393758,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,0.460325236507177,2.29158205375759,2.92150409984269,1.37016503954128,1.5107877947794,0,2.2516060161211,2.71885445390523,1.03552062350364,0.207574695168353,0,0,0.486213434136588,0,0,0,0.206035057238894,0.320919209591815,0,0,0,0.280924522409647,0.0640251524048693,0.114870937911227,0,0,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0.188218760830661,0.169229215783353,0.182927972872773,0,0,0.561142271657738,0,0.197008964751127,0,0,0,0,0.467863216890817,0.214871054048298,0,0,0|short_description=p@chr7:69130787..69130797,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=719 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:69130787..69130797,- | |||
|id=chr7:69130787..69130797,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.16e-13!63;UBERON:0002616!2.03e-13!49;UBERON:0000955!6.21e-13!50;UBERON:0006238!6.21e-13!50;UBERON:0003056!8.15e-13!49;UBERON:0002346!1.66e-11!71;UBERON:0003075!1.66e-11!71;UBERON:0007284!1.66e-11!71;UBERON:0003080!2.02e-10!40;UBERON:0001049!3.73e-10!52;UBERON:0005068!3.73e-10!52;UBERON:0006241!3.73e-10!52;UBERON:0007135!3.73e-10!52;UBERON:0002780!6.90e-10!39;UBERON:0001890!6.90e-10!39;UBERON:0006240!6.90e-10!39;UBERON:0002021!1.50e-09!10;UBERON:0000411!1.50e-09!10;UBERON:0001950!1.50e-09!10;UBERON:0001017!4.96e-09!73;UBERON:0005743!4.96e-09!73;UBERON:0002791!8.20e-09!29;UBERON:0003528!8.20e-09!29;UBERON:0001893!8.20e-09!29;UBERON:0000073!1.70e-08!75;UBERON:0001016!1.70e-08!75;UBERON:0002020!1.12e-07!34;UBERON:0000153!1.48e-07!94;UBERON:0007811!2.37e-07!86;UBERON:0004121!3.30e-07!102;UBERON:0000924!3.30e-07!102;UBERON:0006601!3.30e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,5.36e-47,10;UBERON:0000411,5.36e-47,10;UBERON:0001950,5.36e-47,10;UBERON:0002619,1.73e-27,17;UBERON:0000956,3.65e-22,21;UBERON:0001869,3.65e-22,21;UBERON:0000203,3.65e-22,21;UBERON:0003528,6.61e-16,29;UBERON:0002791,6.61e-16,29;UBERON:0001893,6.61e-16,29;UBERON:0002020,1.75e-13,34;UBERON:0002780,1.12e-11,39;UBERON:0001890,1.12e-11,39;UBERON:0006240,1.12e-11,39;UBERON:0003056,1.52e-11,49;UBERON:0003080,2.28e-11,40;UBERON:0000073,1.99e-10,54;UBERON:0002616,8.41e-10,46;UBERON:0000955,1.40e-09,47;UBERON:0006238,1.40e-09,47;UBERON:0002346,1.19e-08,64;UBERON:0003075,1.19e-08,64;UBERON:0007284,1.19e-08,64;UBERON:0001049,1.36e-08,52;UBERON:0005068,1.36e-08,52;UBERON:0006241,1.36e-08,52;UBERON:0007135,1.36e-08,52;UBERON:0001851,2.89e-08,1;UBERON:0005889,2.89e-08,1;UBERON:0001017,1.71e-07,73;UBERON:0010371,1.78e-07,73;UBERON:0001016,2.85e-07,75;UBERON:0004121,6.58e-07,95;UBERON:0000924,6.58e-07,95;UBERON:0006601,6.58e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0,0,0.191690942036473,0,1.10115880999389,0.510749352340751,0.153606533256243,0.131886287730194,0.182975287204819,0.52091337055676,0.558365998002762,0,0.61119299110724,0.589257170947335,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0.220841518460394,0.484875253135222,0,0.292780797011547,0.209446706813455,0,0,0,0,0.299581278809645,0,0.502617408451458,0.347648640384553,1.02286182932132,0,0.648965052271031,0.305518091550949,0,0,0,0.390361328888111,0.229902104433473,0,0,0.544291993210623,0.896796041993948,0.187403449119458,1.03481348295606,0.215567992932842,0,0.351902248327898,0,0.556094498451196,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0.462801338662135,0.697601834251224,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,0,0.411618449517138,0,0,0.426576501070468,0.696710015581316,0,0,0,0.380451252225118,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0.407302655690628,0.387904974335251,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0.189491411770485,0,0,0.938760993154008,0,0.238043640886014,0,0.315270288212382,0.44292937929755,0.318909537314974,0.491589944147214,0,0,0,0,0,0,0.160550589987792,0.586058432961016,0,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0.222798674082394,0,0,0,0,0,0,0,0.651547837414304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0.428674070063185,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0.209088296014469,0.436725127492355,0,0,0,0,0,0,0.149516546043979,0,0,0,0.675824501963113,0.352071715937262,0.5208175393758,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,0.460325236507177,2.29158205375759,2.92150409984269,1.37016503954128,1.5107877947794,0,2.2516060161211,2.71885445390523,1.03552062350364,0.207574695168353,0,0,0.486213434136588,0,0,0,0.206035057238894,0.320919209591815,0,0,0,0.280924522409647,0.0640251524048693,0.114870937911227,0,0,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0.188218760830661,0.169229215783353,0.182927972872773,0,0,0.561142271657738,0,0.197008964751127,0,0,0,0,0.467863216890817,0.214871054048298,0,0,0 | |||
|short_description=p@chr7:69130787..69130797,- | |||
}} |
Revision as of 14:02, 14 September 2013
Short description: | p@chr7:69130787..69130797, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:69130787..69130797, - |
Coexpression cluster: | MCL_coexpression_mm9:719 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 5.36e-47 | 10 |
visual cortex | 5.36e-47 | 10 |
neocortex | 5.36e-47 | 10 |
regional part of cerebral cortex | 1.73e-27 | 17 |
cerebral cortex | 3.65e-22 | 21 |
cerebral hemisphere | 3.65e-22 | 21 |
pallium | 3.65e-22 | 21 |
brain grey matter | 6.61e-16 | 29 |
regional part of telencephalon | 6.61e-16 | 29 |
telencephalon | 6.61e-16 | 29 |
gray matter | 1.75e-13 | 34 |
regional part of forebrain | 1.12e-11 | 39 |
forebrain | 1.12e-11 | 39 |
future forebrain | 1.12e-11 | 39 |
pre-chordal neural plate | 1.52e-11 | 49 |
anterior neural tube | 2.28e-11 | 40 |
regional part of nervous system | 1.99e-10 | 54 |
regional part of brain | 8.41e-10 | 46 |
brain | 1.40e-09 | 47 |
future brain | 1.40e-09 | 47 |
neurectoderm | 1.19e-08 | 64 |
neural plate | 1.19e-08 | 64 |
presumptive neural plate | 1.19e-08 | 64 |
neural tube | 1.36e-08 | 52 |
neural rod | 1.36e-08 | 52 |
future spinal cord | 1.36e-08 | 52 |
neural keel | 1.36e-08 | 52 |
cortex | 2.89e-08 | 1 |
zygote cortex | 2.89e-08 | 1 |
central nervous system | 1.71e-07 | 73 |
ecto-epithelium | 1.78e-07 | 73 |
nervous system | 2.85e-07 | 75 |
ectoderm-derived structure | 6.58e-07 | 95 |
ectoderm | 6.58e-07 | 95 |
presumptive ectoderm | 6.58e-07 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.