FFCP PHASE1:Mm9::chr7:64764767..64764780,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=705|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:64764767..64764780,-|id=chr7:64764767..64764780,-|ontology_enrichment_celltype=CL:0000117!2.33e-22!23;CL:0000337!2.33e-22!23;CL:0000540!1.79e-13!33;CL:0000047!1.79e-13!33;CL:0000031!1.79e-13!33;CL:0000404!1.79e-13!33;CL:0000393!2.15e-10!39;CL:0000211!2.15e-10!39;CL:0002319!7.63e-09!43;CL:0000221!1.67e-08!44;CL:0000133!1.67e-08!44;CL:0002609!8.53e-07!6;CL:0000055!8.97e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,4.84e-15,23;CL:0000337,4.84e-15,23;CL:0000540,1.21e-09,33;CL:0000047,1.21e-09,33;CL:0000031,1.21e-09,33;CL:0000404,1.21e-09,33;CL:0002612,2.08e-08,3;CL:0000393,9.56e-08,39;CL:0000211,9.56e-08,39;CL:0002319,8.80e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!9.25e-33!34;UBERON:0001049!6.50e-31!52;UBERON:0005068!6.50e-31!52;UBERON:0006241!6.50e-31!52;UBERON:0007135!6.50e-31!52;UBERON:0001017!2.55e-28!73;UBERON:0005743!2.55e-28!73;UBERON:0000955!5.15e-28!50;UBERON:0006238!5.15e-28!50;UBERON:0000073!3.54e-27!75;UBERON:0001016!3.54e-27!75;UBERON:0002616!7.93e-27!49;UBERON:0002791!3.11e-26!29;UBERON:0003528!3.11e-26!29;UBERON:0001893!3.11e-26!29;UBERON:0003080!6.96e-25!40;UBERON:0002780!1.08e-23!39;UBERON:0001890!1.08e-23!39;UBERON:0006240!1.08e-23!39;UBERON:0000033!7.22e-21!63;UBERON:0002346!2.69e-20!71;UBERON:0003075!2.69e-20!71;UBERON:0007284!2.69e-20!71;UBERON:0000956!6.80e-20!21;UBERON:0001869!6.80e-20!21;UBERON:0000203!6.80e-20!21;UBERON:0003056!1.24e-19!49;UBERON:0004121!4.70e-17!102;UBERON:0000924!4.70e-17!102;UBERON:0006601!4.70e-17!102;UBERON:0002619!2.08e-16!17;UBERON:0002021!2.27e-13!10;UBERON:0000411!2.27e-13!10;UBERON:0001950!2.27e-13!10;UBERON:0007811!3.44e-12!86;UBERON:0000153!3.21e-10!94;UBERON:0002240!8.85e-09!6;UBERON:0005174!8.85e-09!6;UBERON:0001137!8.85e-09!6;UBERON:0001948!1.09e-07!5;UBERON:0002315!1.09e-07!5;UBERON:0002298!1.09e-07!6;UBERON:0000025!1.15e-07!114;UBERON:0002420!2.01e-07!8;UBERON:0007245!2.01e-07!8;UBERON:0010009!2.01e-07!8;UBERON:0010011!2.01e-07!8;UBERON:0000454!2.01e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.63e-38,34;UBERON:0001049,1.36e-37,52;UBERON:0005068,1.36e-37,52;UBERON:0006241,1.36e-37,52;UBERON:0007135,1.36e-37,52;UBERON:0000073,4.37e-36,54;UBERON:0001017,3.66e-31,73;UBERON:0001016,3.76e-30,75;UBERON:0002346,2.50e-29,64;UBERON:0003075,2.50e-29,64;UBERON:0007284,2.50e-29,64;UBERON:0000955,7.19e-28,47;UBERON:0006238,7.19e-28,47;UBERON:0003528,1.69e-27,29;UBERON:0002791,1.69e-27,29;UBERON:0001893,1.69e-27,29;UBERON:0002616,4.65e-26,46;UBERON:0003080,1.06e-25,40;UBERON:0010371,6.54e-25,73;UBERON:0002780,7.31e-24,39;UBERON:0001890,7.31e-24,39;UBERON:0006240,7.31e-24,39;UBERON:0002619,1.40e-23,17;UBERON:0004121,2.27e-22,95;UBERON:0000924,2.27e-22,95;UBERON:0006601,2.27e-22,95;UBERON:0000956,1.66e-21,21;UBERON:0001869,1.66e-21,21;UBERON:0000203,1.66e-21,21;UBERON:0003056,5.01e-20,49;UBERON:0002021,6.02e-20,10;UBERON:0000411,6.02e-20,10;UBERON:0001950,6.02e-20,10;UBERON:0010314,2.05e-18,92;UBERON:0002240,5.01e-15,6;UBERON:0005174,5.01e-15,6;UBERON:0001137,5.01e-15,6;UBERON:0000025,1.36e-13,114;UBERON:0001948,5.33e-13,5;UBERON:0002315,5.33e-13,5;UBERON:0004111,2.86e-12,122;UBERON:0003076,4.64e-12,12;UBERON:0003057,4.64e-12,12;UBERON:0002257,2.08e-08,3;UBERON:0011216,2.17e-07,194;UBERON:0002420,3.95e-07,8;UBERON:0007245,3.95e-07,8;UBERON:0010009,3.95e-07,8;UBERON:0010011,3.95e-07,8;UBERON:0000454,3.95e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0.725827286159344,0.135005938331691,0.841299845405528,2.85650984403804,4.19650227808066,1.34739879136449,0.766763768145891,2.75765635983006,3.30347642998166,0.893811366596314,0.921639199537461,1.31886287730194,1.00636407962651,0,0.837548997004143,1.12552522006336,2.13917546887534,3.83017161115768,5.26775218956681,1.67759501242771,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14560342750128,0.915001205637253,6.65968066198181,2.25971616249959,4.85859368927628,1.24672826735736,2.43361894601636,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3042074796422,7.82075054082562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,1.17211686592203,0,0,0,0,0,0,0,0,0,0,0,2.89189184779626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0,0,0,0,2.03967832211561,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,4.60325236507177,4.58316410751517,3.43706364687375,3.42541259885321,2.2661816921691,2.02506750069542,0.45032120322422,4.07828168085784,4.14208249401456,0,0,0,0.486213434136588,0.209613162627982,0.367687016900028,0,0.412070114477788,0.64183841918363,0.252697211763798,1.01391719956096,0,0,0.448176066834085,0.34461281373368,0,0.695305955669133,0.38581844092741,0,0.441596760403192,0.342869252385415,0.354951612318675,0,0.872078499793971,0.470546902076653,0.592302255241736,0,0.263069711437843,0,0.561142271657738,0.355905054372522,0.689531376628944,0,0.464810523557898,0.192906610981141,1.24905288968973,0.701794825336225,1.71896843238639,0,0,0|short_description=p@chr7:64764767..64764780,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=705 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:64764767..64764780,- | |||
|id=chr7:64764767..64764780,- | |||
|ontology_enrichment_celltype=CL:0000117!2.33e-22!23;CL:0000337!2.33e-22!23;CL:0000540!1.79e-13!33;CL:0000047!1.79e-13!33;CL:0000031!1.79e-13!33;CL:0000404!1.79e-13!33;CL:0000393!2.15e-10!39;CL:0000211!2.15e-10!39;CL:0002319!7.63e-09!43;CL:0000221!1.67e-08!44;CL:0000133!1.67e-08!44;CL:0002609!8.53e-07!6;CL:0000055!8.97e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.84e-15,23;CL:0000337,4.84e-15,23;CL:0000540,1.21e-09,33;CL:0000047,1.21e-09,33;CL:0000031,1.21e-09,33;CL:0000404,1.21e-09,33;CL:0002612,2.08e-08,3;CL:0000393,9.56e-08,39;CL:0000211,9.56e-08,39;CL:0002319,8.80e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!9.25e-33!34;UBERON:0001049!6.50e-31!52;UBERON:0005068!6.50e-31!52;UBERON:0006241!6.50e-31!52;UBERON:0007135!6.50e-31!52;UBERON:0001017!2.55e-28!73;UBERON:0005743!2.55e-28!73;UBERON:0000955!5.15e-28!50;UBERON:0006238!5.15e-28!50;UBERON:0000073!3.54e-27!75;UBERON:0001016!3.54e-27!75;UBERON:0002616!7.93e-27!49;UBERON:0002791!3.11e-26!29;UBERON:0003528!3.11e-26!29;UBERON:0001893!3.11e-26!29;UBERON:0003080!6.96e-25!40;UBERON:0002780!1.08e-23!39;UBERON:0001890!1.08e-23!39;UBERON:0006240!1.08e-23!39;UBERON:0000033!7.22e-21!63;UBERON:0002346!2.69e-20!71;UBERON:0003075!2.69e-20!71;UBERON:0007284!2.69e-20!71;UBERON:0000956!6.80e-20!21;UBERON:0001869!6.80e-20!21;UBERON:0000203!6.80e-20!21;UBERON:0003056!1.24e-19!49;UBERON:0004121!4.70e-17!102;UBERON:0000924!4.70e-17!102;UBERON:0006601!4.70e-17!102;UBERON:0002619!2.08e-16!17;UBERON:0002021!2.27e-13!10;UBERON:0000411!2.27e-13!10;UBERON:0001950!2.27e-13!10;UBERON:0007811!3.44e-12!86;UBERON:0000153!3.21e-10!94;UBERON:0002240!8.85e-09!6;UBERON:0005174!8.85e-09!6;UBERON:0001137!8.85e-09!6;UBERON:0001948!1.09e-07!5;UBERON:0002315!1.09e-07!5;UBERON:0002298!1.09e-07!6;UBERON:0000025!1.15e-07!114;UBERON:0002420!2.01e-07!8;UBERON:0007245!2.01e-07!8;UBERON:0010009!2.01e-07!8;UBERON:0010011!2.01e-07!8;UBERON:0000454!2.01e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.63e-38,34;UBERON:0001049,1.36e-37,52;UBERON:0005068,1.36e-37,52;UBERON:0006241,1.36e-37,52;UBERON:0007135,1.36e-37,52;UBERON:0000073,4.37e-36,54;UBERON:0001017,3.66e-31,73;UBERON:0001016,3.76e-30,75;UBERON:0002346,2.50e-29,64;UBERON:0003075,2.50e-29,64;UBERON:0007284,2.50e-29,64;UBERON:0000955,7.19e-28,47;UBERON:0006238,7.19e-28,47;UBERON:0003528,1.69e-27,29;UBERON:0002791,1.69e-27,29;UBERON:0001893,1.69e-27,29;UBERON:0002616,4.65e-26,46;UBERON:0003080,1.06e-25,40;UBERON:0010371,6.54e-25,73;UBERON:0002780,7.31e-24,39;UBERON:0001890,7.31e-24,39;UBERON:0006240,7.31e-24,39;UBERON:0002619,1.40e-23,17;UBERON:0004121,2.27e-22,95;UBERON:0000924,2.27e-22,95;UBERON:0006601,2.27e-22,95;UBERON:0000956,1.66e-21,21;UBERON:0001869,1.66e-21,21;UBERON:0000203,1.66e-21,21;UBERON:0003056,5.01e-20,49;UBERON:0002021,6.02e-20,10;UBERON:0000411,6.02e-20,10;UBERON:0001950,6.02e-20,10;UBERON:0010314,2.05e-18,92;UBERON:0002240,5.01e-15,6;UBERON:0005174,5.01e-15,6;UBERON:0001137,5.01e-15,6;UBERON:0000025,1.36e-13,114;UBERON:0001948,5.33e-13,5;UBERON:0002315,5.33e-13,5;UBERON:0004111,2.86e-12,122;UBERON:0003076,4.64e-12,12;UBERON:0003057,4.64e-12,12;UBERON:0002257,2.08e-08,3;UBERON:0011216,2.17e-07,194;UBERON:0002420,3.95e-07,8;UBERON:0007245,3.95e-07,8;UBERON:0010009,3.95e-07,8;UBERON:0010011,3.95e-07,8;UBERON:0000454,3.95e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0.725827286159344,0.135005938331691,0.841299845405528,2.85650984403804,4.19650227808066,1.34739879136449,0.766763768145891,2.75765635983006,3.30347642998166,0.893811366596314,0.921639199537461,1.31886287730194,1.00636407962651,0,0.837548997004143,1.12552522006336,2.13917546887534,3.83017161115768,5.26775218956681,1.67759501242771,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14560342750128,0.915001205637253,6.65968066198181,2.25971616249959,4.85859368927628,1.24672826735736,2.43361894601636,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3042074796422,7.82075054082562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,1.17211686592203,0,0,0,0,0,0,0,0,0,0,0,2.89189184779626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0,0,0,0,2.03967832211561,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,4.60325236507177,4.58316410751517,3.43706364687375,3.42541259885321,2.2661816921691,2.02506750069542,0.45032120322422,4.07828168085784,4.14208249401456,0,0,0,0.486213434136588,0.209613162627982,0.367687016900028,0,0.412070114477788,0.64183841918363,0.252697211763798,1.01391719956096,0,0,0.448176066834085,0.34461281373368,0,0.695305955669133,0.38581844092741,0,0.441596760403192,0.342869252385415,0.354951612318675,0,0.872078499793971,0.470546902076653,0.592302255241736,0,0.263069711437843,0,0.561142271657738,0.355905054372522,0.689531376628944,0,0.464810523557898,0.192906610981141,1.24905288968973,0.701794825336225,1.71896843238639,0,0,0 | |||
|short_description=p@chr7:64764767..64764780,- | |||
}} |
Revision as of 13:58, 14 September 2013
Short description: | p@chr7:64764767..64764780, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:64764767..64764780, - |
Coexpression cluster: | MCL_coexpression_mm9:705 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.84e-15 | 23 |
neuroblast (sensu Vertebrata) | 4.84e-15 | 23 |
neuron | 1.21e-09 | 33 |
neuronal stem cell | 1.21e-09 | 33 |
neuroblast | 1.21e-09 | 33 |
electrically signaling cell | 1.21e-09 | 33 |
neuron of the ventral spinal cord | 2.08e-08 | 3 |
electrically responsive cell | 9.56e-08 | 39 |
electrically active cell | 9.56e-08 | 39 |
neural cell | 8.80e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.