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FFCP PHASE1:Mm9::chr7:29166897..29166918,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=210|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:29166897..29166918,-|id=chr7:29166897..29166918,-|ontology_enrichment_celltype=CL:0000063!8.12e-16!66;CL:0000144!4.59e-14!121;CL:0000012!4.59e-14!121;CL:0002371!3.90e-12!118;CL:0000066!3.52e-11!25;CL:0000548!1.20e-10!115;CL:0000004!1.20e-10!115;CL:0000255!1.20e-10!115;CL:0000219!2.42e-09!54;CL:0002320!5.84e-09!46;CL:0000134!5.84e-09!46;CL:0000034!6.40e-09!97;CL:0002563!1.79e-08!9;CL:0002251!1.79e-08!9;CL:0000223!5.06e-08!20;CL:0000988!5.93e-08!32;CL:0002032!5.93e-08!32;CL:0000037!5.93e-08!32;CL:0000566!5.93e-08!32;CL:0000837!5.93e-08!32;CL:0000723!1.10e-07!91;CL:0000048!1.10e-07!91;CL:0000838!2.49e-07!12;CL:0000084!9.17e-07!11;CL:0000827!9.17e-07!11|ontology_enrichment_celltype_v019_2=CL:0000066,1.40e-17,25;CL:0002563,2.08e-15,9;CL:0002251,2.08e-15,9;CL:0000223,2.98e-14,20;CL:0000239,6.99e-14,6;CL:0000677,6.99e-14,6;CL:0000584,6.99e-14,6;CL:0002320,7.05e-14,46;CL:0000134,7.05e-14,46;CL:0000034,1.94e-13,97;CL:0000075,8.59e-12,7;CL:0000219,3.74e-11,54;CL:0000791,4.30e-11,9;CL:0000789,4.30e-11,9;CL:0002420,4.30e-11,9;CL:0002419,4.30e-11,9;CL:0000790,4.30e-11,9;CL:0000723,8.47e-11,91;CL:0000048,8.47e-11,91;CL:0000988,1.46e-09,32;CL:0002032,1.46e-09,32;CL:0000037,1.46e-09,32;CL:0000837,1.46e-09,32;CL:0000624,1.65e-09,8;CL:0000084,6.76e-09,11;CL:0000827,6.76e-09,11;CL:0002076,1.10e-08,15;CL:0000838,4.50e-08,12;CL:0000182,1.28e-07,5;CL:0000682,1.46e-07,3;CL:0000542,2.24e-07,13;CL:0000051,2.24e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000485!2.31e-09!11;UBERON:0002384!5.84e-09!46;UBERON:0003350!1.79e-08!9;UBERON:0004808!1.79e-08!9;UBERON:0001277!1.79e-08!9;UBERON:0000344!5.89e-08!15;UBERON:0001242!5.82e-07!13;UBERON:0000060!5.82e-07!13;UBERON:0001262!5.82e-07!13;UBERON:0004786!5.82e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.08e-15,9;UBERON:0004808,2.08e-15,9;UBERON:0001277,2.08e-15,9;UBERON:0002384,7.05e-14,46;UBERON:0000485,2.38e-12,11;UBERON:0000490,2.48e-11,66;UBERON:0001242,3.10e-10,13;UBERON:0001262,3.10e-10,13;UBERON:0004786,3.10e-10,13;UBERON:0000344,1.10e-08,15;UBERON:0003929,2.94e-08,55|phase1_expression=0.960893082628764,13.9590163055744,15.9249733786338,5.14189159221611,6.01074875935617,12.255186849568,7.47560449905682,13.1705789910408,6.89864738543167,7.72412936862578,0,0.239316476986009,2.05440875917447,4.72070173062586,0,0,0,0.315462165358238,0.137114433605739,0.42438965179803,0.17008658030214,0.595745707205312,0.261199789138935,0.319984845586813,0.91763712426868,6.89078356938024,10.7690499039769,6.67960821326256,0,0.252030129759931,0.221730510655305,0,0.61506478758457,0,4.91047753577167,0.997407872150954,2.6542016314108,1.67412652294763,2.3440060335714,1.57057123192139,21.1763335691165,4.09827290975067,0.971020706062307,0,0,0,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0.671130424230945,1.45072428402269,1.68046899571232,0.771778308107841,2.0057340795713,1.03134418455488,0,0,0,0,1.77858959222228,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0.68014404096107,95.9451457602553,16.3480536626463,2.03991400112325,7.55584468292944,0.649776417447669,3.13618820968135,0,0,0,0,0.281686839553361,0,0,0,0,0,0.505524445014783,0.11418387971906,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,16.7741174308288,40.7933857075517,11.3092502095028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,15.4486901208912,18.2717014051448,6.81992398549422,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0,0,0,0,0,0,0,0.146199987425332,0.439100230582101,0,0,0.102904612379284,0,0.528901133327089,0,0,0,0.201683524623343,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549122826376163,0,0,0,0.505157755894224,0.179397413521912,0.482443521363367,0.184753190166605,0,0.325929952884052,0.169745085775188,0,0.167506257441816,0.238043640886014,0.195133647857799,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0.631016438832513,0.390438744296638,0.215423397732799,0.716906393857656,0.445597348164788,0.566153061577665,0.404810701674894,0,0,0,0,0.35613120733451,0.162886959353576,0.329940245945071,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0.354680467284547,0,0,0.304464949114599,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,0.341741761595705,0.206386867963223,0,0,0,0,22.6071311891828,36.2474261518274,17.5513966731618,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0.0897138566094757,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0.114870937911227,0,0,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0.385813221962283,0,0.233931608445408,0,0,0,0|short_description=p@chr7:29166897..29166918,-}}
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=210
|UniProt=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chr7:29166897..29166918,-
|id=chr7:29166897..29166918,-
|ontology_enrichment_celltype=CL:0000063!8.12e-16!66;CL:0000144!4.59e-14!121;CL:0000012!4.59e-14!121;CL:0002371!3.90e-12!118;CL:0000066!3.52e-11!25;CL:0000548!1.20e-10!115;CL:0000004!1.20e-10!115;CL:0000255!1.20e-10!115;CL:0000219!2.42e-09!54;CL:0002320!5.84e-09!46;CL:0000134!5.84e-09!46;CL:0000034!6.40e-09!97;CL:0002563!1.79e-08!9;CL:0002251!1.79e-08!9;CL:0000223!5.06e-08!20;CL:0000988!5.93e-08!32;CL:0002032!5.93e-08!32;CL:0000037!5.93e-08!32;CL:0000566!5.93e-08!32;CL:0000837!5.93e-08!32;CL:0000723!1.10e-07!91;CL:0000048!1.10e-07!91;CL:0000838!2.49e-07!12;CL:0000084!9.17e-07!11;CL:0000827!9.17e-07!11
|ontology_enrichment_celltype_v019_2=CL:0000066,1.40e-17,25;CL:0002563,2.08e-15,9;CL:0002251,2.08e-15,9;CL:0000223,2.98e-14,20;CL:0000239,6.99e-14,6;CL:0000677,6.99e-14,6;CL:0000584,6.99e-14,6;CL:0002320,7.05e-14,46;CL:0000134,7.05e-14,46;CL:0000034,1.94e-13,97;CL:0000075,8.59e-12,7;CL:0000219,3.74e-11,54;CL:0000791,4.30e-11,9;CL:0000789,4.30e-11,9;CL:0002420,4.30e-11,9;CL:0002419,4.30e-11,9;CL:0000790,4.30e-11,9;CL:0000723,8.47e-11,91;CL:0000048,8.47e-11,91;CL:0000988,1.46e-09,32;CL:0002032,1.46e-09,32;CL:0000037,1.46e-09,32;CL:0000837,1.46e-09,32;CL:0000624,1.65e-09,8;CL:0000084,6.76e-09,11;CL:0000827,6.76e-09,11;CL:0002076,1.10e-08,15;CL:0000838,4.50e-08,12;CL:0000182,1.28e-07,5;CL:0000682,1.46e-07,3;CL:0000542,2.24e-07,13;CL:0000051,2.24e-07,13
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000485!2.31e-09!11;UBERON:0002384!5.84e-09!46;UBERON:0003350!1.79e-08!9;UBERON:0004808!1.79e-08!9;UBERON:0001277!1.79e-08!9;UBERON:0000344!5.89e-08!15;UBERON:0001242!5.82e-07!13;UBERON:0000060!5.82e-07!13;UBERON:0001262!5.82e-07!13;UBERON:0004786!5.82e-07!13
|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.08e-15,9;UBERON:0004808,2.08e-15,9;UBERON:0001277,2.08e-15,9;UBERON:0002384,7.05e-14,46;UBERON:0000485,2.38e-12,11;UBERON:0000490,2.48e-11,66;UBERON:0001242,3.10e-10,13;UBERON:0001262,3.10e-10,13;UBERON:0004786,3.10e-10,13;UBERON:0000344,1.10e-08,15;UBERON:0003929,2.94e-08,55
|phase1_expression=0.960893082628764,13.9590163055744,15.9249733786338,5.14189159221611,6.01074875935617,12.255186849568,7.47560449905682,13.1705789910408,6.89864738543167,7.72412936862578,0,0.239316476986009,2.05440875917447,4.72070173062586,0,0,0,0.315462165358238,0.137114433605739,0.42438965179803,0.17008658030214,0.595745707205312,0.261199789138935,0.319984845586813,0.91763712426868,6.89078356938024,10.7690499039769,6.67960821326256,0,0.252030129759931,0.221730510655305,0,0.61506478758457,0,4.91047753577167,0.997407872150954,2.6542016314108,1.67412652294763,2.3440060335714,1.57057123192139,21.1763335691165,4.09827290975067,0.971020706062307,0,0,0,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0.671130424230945,1.45072428402269,1.68046899571232,0.771778308107841,2.0057340795713,1.03134418455488,0,0,0,0,1.77858959222228,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0.68014404096107,95.9451457602553,16.3480536626463,2.03991400112325,7.55584468292944,0.649776417447669,3.13618820968135,0,0,0,0,0.281686839553361,0,0,0,0,0,0.505524445014783,0.11418387971906,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,16.7741174308288,40.7933857075517,11.3092502095028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,15.4486901208912,18.2717014051448,6.81992398549422,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0,0,0,0,0,0,0,0.146199987425332,0.439100230582101,0,0,0.102904612379284,0,0.528901133327089,0,0,0,0.201683524623343,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549122826376163,0,0,0,0.505157755894224,0.179397413521912,0.482443521363367,0.184753190166605,0,0.325929952884052,0.169745085775188,0,0.167506257441816,0.238043640886014,0.195133647857799,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0.631016438832513,0.390438744296638,0.215423397732799,0.716906393857656,0.445597348164788,0.566153061577665,0.404810701674894,0,0,0,0,0.35613120733451,0.162886959353576,0.329940245945071,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0.354680467284547,0,0,0.304464949114599,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,0.341741761595705,0.206386867963223,0,0,0,0,22.6071311891828,36.2474261518274,17.5513966731618,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0.0897138566094757,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0.114870937911227,0,0,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0.385813221962283,0,0.233931608445408,0,0,0,0
|short_description=p@chr7:29166897..29166918,-
}}

Revision as of 13:04, 14 September 2013

Short description:p@chr7:29166897..29166918, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr7:29166897..29166918, -
Coexpression cluster:MCL_coexpression_mm9:210
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p@chr7:29166897..29166918-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I513.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I615.92
CD326+ enterocyte, pool1.CNhs13542.11848-124I35.14
CD326+ enterocyte, pool2.CNhs13197.11849-124I46.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I712.26
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I87.48
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E913.17
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.72
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.05
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.72
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H96.89
GP2+ M cell, pool2.CNhs13231.11846-124I110.77
GP2+ M cell, pool3.CNhs13240.11847-124I26.68
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.91
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G921.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.10
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G395.95
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F716.35
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.56
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.14
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C716.77
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D140.79
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D411.31
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C815.45
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D218.27
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.82
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C622.61
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C936.25
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D317.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell1.40e-1725
intestinal epithelial cell2.08e-159
epithelial cell of alimentary canal2.08e-159
endodermal cell2.98e-1420
brush border epithelial cell6.99e-146
gut absorptive cell6.99e-146
enterocyte6.99e-146
connective tissue cell7.05e-1446
mesenchymal cell7.05e-1446
stem cell1.94e-1397
columnar/cuboidal epithelial cell8.59e-127
motile cell3.74e-1154
mature alpha-beta T cell4.30e-119
alpha-beta T cell4.30e-119
immature T cell4.30e-119
mature T cell4.30e-119
immature alpha-beta T cell4.30e-119
somatic stem cell8.47e-1191
multi fate stem cell8.47e-1191
hematopoietic cell1.46e-0932
hematopoietic oligopotent progenitor cell1.46e-0932
hematopoietic stem cell1.46e-0932
hematopoietic multipotent progenitor cell1.46e-0932
CD4-positive, alpha-beta T cell1.65e-098
T cell6.76e-0911
pro-T cell6.76e-0911
endo-epithelial cell1.10e-0815
lymphoid lineage restricted progenitor cell4.50e-0812
hepatocyte1.28e-075
M cell of gut1.46e-073
lymphocyte2.24e-0713
common lymphoid progenitor2.24e-0713







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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