FFCP PHASE1:Mm9::chr7:27905825..27905859,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=91|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:27905825..27905859,+|id=chr7:27905825..27905859,+|ontology_enrichment_celltype=CL:0000181!2.97e-07!5;CL:0000417!2.97e-07!5;CL:0000668!2.97e-07!5;CL:0000412!2.97e-07!5;CL:0000182!2.97e-07!5|ontology_enrichment_celltype_v019_2=CL:0000182,5.13e-14,5;CL:0000057,1.74e-08,1;CL:0000632,1.74e-08,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!8.37e-10!14;UBERON:0000117!8.37e-10!14;UBERON:0000171!8.37e-10!14;UBERON:0000170!8.37e-10!14;UBERON:0005597!8.37e-10!14;UBERON:0000118!8.37e-10!14;UBERON:0000077!6.01e-08!97;UBERON:0005153!9.45e-08!17;UBERON:0005178!9.45e-08!17;UBERON:0005181!9.45e-08!17;UBERON:0002224!9.45e-08!17;UBERON:0000915!9.45e-08!17;UBERON:0008947!9.45e-08!17;UBERON:0003258!9.45e-08!17;UBERON:0001041!3.85e-07!92;UBERON:0009569!5.03e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0002365,2.27e-10,25;UBERON:0002330,2.27e-10,25;UBERON:0002107,1.93e-08,22;UBERON:0007499,1.93e-08,22;UBERON:0006925,1.93e-08,22;UBERON:0009497,1.93e-08,22;UBERON:0000015,1.93e-08,22;UBERON:0002423,1.93e-08,22;UBERON:0006235,1.93e-08,22;UBERON:0008835,1.93e-08,22;UBERON:0003894,1.93e-08,22;UBERON:0004161,1.93e-08,22;UBERON:0008836,1.93e-08,22;UBERON:0001044,2.44e-08,1;UBERON:0001736,2.44e-08,1;UBERON:0003293,2.44e-08,1;UBERON:0003294,2.44e-08,1;UBERON:0001829,2.44e-08,1;UBERON:0010047,2.44e-08,1;UBERON:0000167,2.44e-08,1;UBERON:0006298,2.44e-08,1;UBERON:0009854,4.51e-08,23;UBERON:0009856,4.51e-08,23|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,0.679971333707751,2.69851595818909,1.94932925234301,4.48026887097336,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0.517875767294343,0,0,0,0,0,0,0.125666591329675,0,0.433798070759735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,2.10441855886474,0,0,0,0,0,0,0,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96452627087149,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0.964887042726734,2.58654466233247,0,0,0,0,0.167506257441816,0,0.195133647857799,0.472905432318573,0.44292937929755,0.637819074629948,0.983179888294428,1.03610989119537,0.723245292907558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,12.2558258071364,0,0,0,0,0,0.164549020602121,0,0,0,0,20.4458953647435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.404593039154462,0.165306911450672,0,0,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0.15241361331,0,0,0,0,0.453460767230423,0,0,0,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0.263069711437843,0,0,0,0,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0|short_description=p@chr7:27905825..27905859,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=91 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:27905825..27905859,+ | |||
|id=chr7:27905825..27905859,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.97e-07!5;CL:0000417!2.97e-07!5;CL:0000668!2.97e-07!5;CL:0000412!2.97e-07!5;CL:0000182!2.97e-07!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.13e-14,5;CL:0000057,1.74e-08,1;CL:0000632,1.74e-08,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!8.37e-10!14;UBERON:0000117!8.37e-10!14;UBERON:0000171!8.37e-10!14;UBERON:0000170!8.37e-10!14;UBERON:0005597!8.37e-10!14;UBERON:0000118!8.37e-10!14;UBERON:0000077!6.01e-08!97;UBERON:0005153!9.45e-08!17;UBERON:0005178!9.45e-08!17;UBERON:0005181!9.45e-08!17;UBERON:0002224!9.45e-08!17;UBERON:0000915!9.45e-08!17;UBERON:0008947!9.45e-08!17;UBERON:0003258!9.45e-08!17;UBERON:0001041!3.85e-07!92;UBERON:0009569!5.03e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,2.27e-10,25;UBERON:0002330,2.27e-10,25;UBERON:0002107,1.93e-08,22;UBERON:0007499,1.93e-08,22;UBERON:0006925,1.93e-08,22;UBERON:0009497,1.93e-08,22;UBERON:0000015,1.93e-08,22;UBERON:0002423,1.93e-08,22;UBERON:0006235,1.93e-08,22;UBERON:0008835,1.93e-08,22;UBERON:0003894,1.93e-08,22;UBERON:0004161,1.93e-08,22;UBERON:0008836,1.93e-08,22;UBERON:0001044,2.44e-08,1;UBERON:0001736,2.44e-08,1;UBERON:0003293,2.44e-08,1;UBERON:0003294,2.44e-08,1;UBERON:0001829,2.44e-08,1;UBERON:0010047,2.44e-08,1;UBERON:0000167,2.44e-08,1;UBERON:0006298,2.44e-08,1;UBERON:0009854,4.51e-08,23;UBERON:0009856,4.51e-08,23 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,0.679971333707751,2.69851595818909,1.94932925234301,4.48026887097336,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0.517875767294343,0,0,0,0,0,0,0.125666591329675,0,0.433798070759735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,2.10441855886474,0,0,0,0,0,0,0,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96452627087149,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0.964887042726734,2.58654466233247,0,0,0,0,0.167506257441816,0,0.195133647857799,0.472905432318573,0.44292937929755,0.637819074629948,0.983179888294428,1.03610989119537,0.723245292907558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,12.2558258071364,0,0,0,0,0,0.164549020602121,0,0,0,0,20.4458953647435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.404593039154462,0.165306911450672,0,0,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0.15241361331,0,0,0,0,0.453460767230423,0,0,0,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0.263069711437843,0,0,0,0,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr7:27905825..27905859,+ | |||
}} |
Revision as of 12:57, 14 September 2013
Short description: | p@chr7:27905825..27905859, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:27905825..27905859, + |
Coexpression cluster: | MCL_coexpression_mm9:91 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.13e-14 | 5 |
fibroblast | 1.74e-08 | 1 |
hepatic stellate cell | 1.74e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
exocrine gland | 2.27e-10 | 25 |
exocrine system | 2.27e-10 | 25 |
liver | 1.93e-08 | 22 |
epithelial sac | 1.93e-08 | 22 |
digestive gland | 1.93e-08 | 22 |
epithelium of foregut-midgut junction | 1.93e-08 | 22 |
anatomical boundary | 1.93e-08 | 22 |
hepatobiliary system | 1.93e-08 | 22 |
foregut-midgut junction | 1.93e-08 | 22 |
hepatic diverticulum | 1.93e-08 | 22 |
liver primordium | 1.93e-08 | 22 |
septum transversum | 1.93e-08 | 22 |
liver bud | 1.93e-08 | 22 |
saliva-secreting gland | 2.44e-08 | 1 |
submandibular gland | 2.44e-08 | 1 |
gland of oral region | 2.44e-08 | 1 |
gland of foregut | 2.44e-08 | 1 |
major salivary gland | 2.44e-08 | 1 |
oral gland | 2.44e-08 | 1 |
oral cavity | 2.44e-08 | 1 |
submandibular gland primordium | 2.44e-08 | 1 |
digestive tract diverticulum | 4.51e-08 | 23 |
sac | 4.51e-08 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.