FFCP PHASE1:Hg19::chrX:89462083..89462089,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:89462083..89462089,+|id=chrX:89462083..89462089,+|ontology_enrichment_celltype=CL:0002322!2.26e-42!5;CL:0002327!3.61e-14!4;CL:0000540!5.94e-10!6;CL:0000031!5.94e-10!6;CL:0000404!5.94e-10!6;CL:0000054!4.09e-08!2;CL:0000137!4.09e-08!2;CL:0000092!4.09e-08!2;CL:0000047!1.11e-07!8|ontology_enrichment_celltype_v019=CL:0000054;5.04e-34;2!CL:0000137;5.04e-34;2!CL:0000092;5.04e-34;2!CL:0002623;3.27e-23;3!CL:1000306;8.69e-18;4!CL:0002547;8.69e-18;4!CL:0000622;1.60e-14;5!CL:0000154;2.45e-12;6!CL:0000151;6.23e-10;36!CL:0000150;1.12e-08;9!CL:0002092;6.13e-08;10|ontology_enrichment_celltype_v019_2=CL:0000054,7.05e-34,2;CL:0000137,7.05e-34,2;CL:0000092,7.05e-34,2;CL:0002623,3.27e-23,3;CL:1000306,7.35e-18,4;CL:0002547,7.35e-18,4;CL:0000622,1.60e-14,5;CL:0000154,2.45e-12,6;CL:0000150,1.12e-08,9;CL:0000151,1.92e-08,36;CL:0002092,6.56e-08,10;CL:0000062,2.63e-07,11;CL:0000375,2.63e-07,11;CL:0000335,2.63e-07,11|ontology_enrichment_development_v019=CL:0000335;2.47e-07;11|ontology_enrichment_disease=DOID:200!4.09e-08!2;DOID:4305!4.09e-08!2|ontology_enrichment_disease_v019=DOID:200;5.04e-34;2!DOID:4305;5.04e-34;2!DOID:201;2.45e-12;6!DOID:0060100;2.45e-12;6|ontology_enrichment_disease_v019_2=DOID:200,7.05e-34,2;DOID:4305,7.05e-34,2;DOID:201,2.74e-12,6;DOID:0060100,2.74e-12,6|ontology_enrichment_uberon=UBERON:0001911!3.61e-14!4;UBERON:0005333!3.61e-14!4;UBERON:0008425!3.61e-14!4;UBERON:0005311!3.61e-14!4;UBERON:0000076!1.54e-07!8|ontology_enrichment_uberon_v019=UBERON:0004797;8.69e-18;4!UBERON:0000415;8.69e-18;4!UBERON:0007240;8.69e-18;4!UBERON:0005742;8.69e-18;4!UBERON:0005734;8.69e-18;4!UBERON:0004664;8.69e-18;4!UBERON:0004663;8.69e-18;4!UBERON:0001044;2.45e-12;6!UBERON:0003293;2.45e-12;6!UBERON:0003294;2.45e-12;6!UBERON:0010047;2.45e-12;6!UBERON:0003408;2.45e-12;6!UBERON:0000167;2.45e-12;6!UBERON:0002371;7.92e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0000415,7.35e-18,4;UBERON:0007240,7.35e-18,4;UBERON:0005742,7.35e-18,4;UBERON:0005734,7.35e-18,4;UBERON:0004664,7.35e-18,4;UBERON:0004663,7.35e-18,4;UBERON:0001044,2.45e-12,6;UBERON:0003293,2.45e-12,6;UBERON:0003294,2.45e-12,6;UBERON:0010047,2.45e-12,6;UBERON:0000167,2.45e-12,6;UBERON:0004797,8.16e-11,7;UBERON:0003408,6.13e-08,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72131935057184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.265059536642971,0.116193942869518,0.621966330092223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.825236619583403,0.83088067605837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1441462864015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3657478167516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chrX:89462083..89462089,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chrX:89462083..89462089,+ | |||
|id=chrX:89462083..89462089,+ | |||
|ontology_enrichment_celltype=CL:0002322!2.26e-42!5;CL:0002327!3.61e-14!4;CL:0000540!5.94e-10!6;CL:0000031!5.94e-10!6;CL:0000404!5.94e-10!6;CL:0000054!4.09e-08!2;CL:0000137!4.09e-08!2;CL:0000092!4.09e-08!2;CL:0000047!1.11e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000054;5.04e-34;2!CL:0000137;5.04e-34;2!CL:0000092;5.04e-34;2!CL:0002623;3.27e-23;3!CL:1000306;8.69e-18;4!CL:0002547;8.69e-18;4!CL:0000622;1.60e-14;5!CL:0000154;2.45e-12;6!CL:0000151;6.23e-10;36!CL:0000150;1.12e-08;9!CL:0002092;6.13e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,7.05e-34,2;CL:0000137,7.05e-34,2;CL:0000092,7.05e-34,2;CL:0002623,3.27e-23,3;CL:1000306,7.35e-18,4;CL:0002547,7.35e-18,4;CL:0000622,1.60e-14,5;CL:0000154,2.45e-12,6;CL:0000150,1.12e-08,9;CL:0000151,1.92e-08,36;CL:0002092,6.56e-08,10;CL:0000062,2.63e-07,11;CL:0000375,2.63e-07,11;CL:0000335,2.63e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000335;2.47e-07;11 | |||
|ontology_enrichment_disease=DOID:200!4.09e-08!2;DOID:4305!4.09e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:200;5.04e-34;2!DOID:4305;5.04e-34;2!DOID:201;2.45e-12;6!DOID:0060100;2.45e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:200,7.05e-34,2;DOID:4305,7.05e-34,2;DOID:201,2.74e-12,6;DOID:0060100,2.74e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0001911!3.61e-14!4;UBERON:0005333!3.61e-14!4;UBERON:0008425!3.61e-14!4;UBERON:0005311!3.61e-14!4;UBERON:0000076!1.54e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;8.69e-18;4!UBERON:0000415;8.69e-18;4!UBERON:0007240;8.69e-18;4!UBERON:0005742;8.69e-18;4!UBERON:0005734;8.69e-18;4!UBERON:0004664;8.69e-18;4!UBERON:0004663;8.69e-18;4!UBERON:0001044;2.45e-12;6!UBERON:0003293;2.45e-12;6!UBERON:0003294;2.45e-12;6!UBERON:0010047;2.45e-12;6!UBERON:0003408;2.45e-12;6!UBERON:0000167;2.45e-12;6!UBERON:0002371;7.92e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,7.35e-18,4;UBERON:0007240,7.35e-18,4;UBERON:0005742,7.35e-18,4;UBERON:0005734,7.35e-18,4;UBERON:0004664,7.35e-18,4;UBERON:0004663,7.35e-18,4;UBERON:0001044,2.45e-12,6;UBERON:0003293,2.45e-12,6;UBERON:0003294,2.45e-12,6;UBERON:0010047,2.45e-12,6;UBERON:0000167,2.45e-12,6;UBERON:0004797,8.16e-11,7;UBERON:0003408,6.13e-08,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72131935057184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.265059536642971,0.116193942869518,0.621966330092223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.825236619583403,0.83088067605837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1441462864015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3657478167516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chrX:89462083..89462089,+ | |||
}} |
Revision as of 12:39, 14 September 2013
Short description: | p@chrX:89462083..89462089, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:89462083..89462089, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 7.05e-34 | 2 |
osteocyte | 7.05e-34 | 2 |
osteoclast | 7.05e-34 | 2 |
acinar cell of salivary gland | 3.27e-23 | 3 |
fibroblast of tunica adventitia of artery | 7.35e-18 | 4 |
fibroblast of the aortic adventitia | 7.35e-18 | 4 |
acinar cell | 1.60e-14 | 5 |
protein secreting cell | 2.45e-12 | 6 |
glandular epithelial cell | 1.12e-08 | 9 |
secretory cell | 1.92e-08 | 36 |
bone marrow cell | 6.56e-08 | 10 |
osteoblast | 2.63e-07 | 11 |
osteoprogenitor cell | 2.63e-07 | 11 |
mesenchyme condensation cell | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
artery wall | 7.35e-18 | 4 |
tunica adventitia of artery | 7.35e-18 | 4 |
adventitia | 7.35e-18 | 4 |
tunica adventitia of blood vessel | 7.35e-18 | 4 |
aorta tunica adventitia | 7.35e-18 | 4 |
aorta wall | 7.35e-18 | 4 |
saliva-secreting gland | 2.45e-12 | 6 |
gland of oral region | 2.45e-12 | 6 |
gland of foregut | 2.45e-12 | 6 |
oral gland | 2.45e-12 | 6 |
oral cavity | 2.45e-12 | 6 |
blood vessel layer | 8.16e-11 | 7 |
gland of gut | 6.13e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
giant cell tumor | 7.05e-34 | 2 |
bone giant cell tumor | 7.05e-34 | 2 |
connective tissue cancer | 2.74e-12 | 6 |
musculoskeletal system cancer | 2.74e-12 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.