FFCP PHASE1:Hg19::chrX:67913496..67913505,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9754|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19161|TSSclassifier=S|UniProt=Q92502|association_with_transcript=3bp_to_ENST00000374597,uc004dxc.3_5end|coexpression_cluster_id=C0|description=CAGE_peak_2_at_STARD8_5end|id=chrX:67913496..67913505,+|ontology_enrichment_celltype=CL:0000763!1.71e-37!112;CL:0000049!1.71e-37!112;CL:0002057!8.31e-31!42;CL:0000557!1.12e-28!71;CL:0002194!1.22e-28!63;CL:0000576!1.22e-28!63;CL:0000040!1.22e-28!63;CL:0000559!1.22e-28!63;CL:0002009!1.98e-28!65;CL:0000839!2.75e-28!70;CL:0000860!2.83e-27!45;CL:0000766!6.13e-25!76;CL:0000988!5.03e-18!182;CL:0002032!1.04e-17!165;CL:0000837!1.04e-17!165;CL:0000037!1.42e-17!172;CL:0000566!1.42e-17!172;CL:0002087!8.29e-10!119;CL:0002031!8.83e-10!124;CL:0000738!2.98e-09!140;CL:0002393!3.69e-07!9;CL:0002397!3.69e-07!9|ontology_enrichment_celltype_v019=CL:0000860;3.97e-52;33!CL:0002057;3.97e-52;33!CL:0000473;8.98e-44;39!CL:0000234;8.98e-44;39!CL:0000576;2.04e-42;48!CL:0000766;1.24e-25;69!CL:0000763;1.44e-21;100!CL:0002393;5.03e-13;6!CL:0002397;5.03e-13;6!CL:0002087;9.63e-10;104!CL:0000988;2.36e-08;177!CL:0000738;5.60e-08;136|ontology_enrichment_celltype_v019_2=CL:0000860,1.04e-66,42;CL:0002057,1.04e-66,42;CL:0000473,2.00e-66,48;CL:0000234,2.00e-66,48;CL:0000763,9.72e-62,108;CL:0000049,9.72e-62,108;CL:0002009,2.57e-59,61;CL:0002194,6.77e-59,59;CL:0000576,6.77e-59,59;CL:0000040,6.77e-59,59;CL:0000559,6.77e-59,59;CL:0000557,1.11e-55,67;CL:0000839,2.64e-51,66;CL:0000766,8.12e-51,72;CL:0002032,3.45e-37,161;CL:0000837,3.45e-37,161;CL:0000037,2.10e-36,168;CL:0000988,6.28e-35,177;CL:0002087,6.87e-27,115;CL:0002031,3.95e-25,120;CL:0000738,2.16e-24,136;CL:0002393,5.03e-11,9;CL:0002397,5.03e-11,9;CL:0000134,9.85e-11,354;CL:0002320,3.33e-10,361;CL:0000219,7.40e-09,386;CL:0000048,5.57e-08,427;CL:0000034,1.22e-07,441;CL:0000723,1.22e-07,433|ontology_enrichment_development_v019=CL:0002057;6.17e-49;42!CL:0000049;1.47e-19;108|ontology_enrichment_disease=DOID:8692!6.48e-12!31;DOID:1240!3.25e-08!39|ontology_enrichment_disease_v019=DOID:1036;2.54e-11;8!DOID:8692;2.46e-10;31!DOID:1240;5.04e-07;39|ontology_enrichment_disease_v019_2=DOID:1036,5.11e-11,8;DOID:8692,9.81e-11,31;DOID:1240,8.22e-08,39|ontology_enrichment_uberon=UBERON:0002371!2.50e-25!80;UBERON:0002390!4.75e-25!102;UBERON:0003061!4.75e-25!102;UBERON:0001474!3.35e-22!86;UBERON:0002193!1.86e-21!112;UBERON:0003081!4.33e-19!216;UBERON:0007023!1.96e-18!115;UBERON:0002405!1.75e-17!115;UBERON:0004765!1.00e-15!101;UBERON:0001434!1.00e-15!101;UBERON:0002204!2.37e-08!167;UBERON:0001049!2.76e-07!57;UBERON:0005068!2.76e-07!57;UBERON:0006241!2.76e-07!57;UBERON:0007135!2.76e-07!57|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.15e-50,76;UBERON:0001474,3.56e-45,82;UBERON:0002390,5.85e-43,98;UBERON:0003061,5.85e-43,98;UBERON:0002405,8.17e-42,93;UBERON:0004765,6.00e-40,90;UBERON:0002193,3.00e-39,108;UBERON:0001434,1.36e-34,100;UBERON:0003081,1.73e-21,203;UBERON:0002204,2.31e-17,167;UBERON:0000926,1.94e-11,315;UBERON:0004120,1.94e-11,315;UBERON:0006603,1.94e-11,315;UBERON:0002384,4.94e-10,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0.626909442956176,0,0.136874425072884,0,0,0,0,1.57345710739562,0,2.16742572642506,0,0,0,0,0,0,7.75593571944628,5.41470008169383,4.55722828503289,1.56740831967947,1.6194683300949,1.54545340580512,2.18097358169347,2.26725566213286,3.39617685662943,4.18372266430232,3.70051099219643,8.05236564327269,5.46615545412086,5.12321413058201,11.3511470346521,9.99762474136194,3.22742341791913,13.5426486594342,3.20011977222428,3.0019676506363,3.82029923556644,7.65209730927256,6.73950956859797,12.1474053901818,2.63881040149373,2.99195486432448,7.6720455095885,7.83564944297177,5.6738522469114,6.22822248995575,6.78371396193207,5.73631210262222,8.25317609879443,5.44859552370032,10.3117738076518,11.7091083353127,2.74631872205524,1.06302149982522,2.51590374610051,0.561643155732475,0.450530678524519,0,1.42506371870624,0.79566670879636,0.365328307529268,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0,0,0,2.3858578411533,0,0.0945348171640679,0.221729397462564,0.43917392846563,0.785874452986276,0,0.370784442784429,0.649094787309367,0.348259474598534,0.26591592103773,0,0,0,0.596287222100115,0,0.694281003215189,0.56530794192401,1.25849830862972,0,1.25396979922086,0,0,0,0,0,0.488124115096339,0.735326160691737,0.81014194788176,0.892997282840798,0.673588117878509,0.900891843866578,0,1.89853131913626,0.366403487860815,0,0,0,0,0.12663051166458,0,0.573673241497627,0,0.560677600142307,0,0.24666754841716,0.933633106199299,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0.427114777637135,0.211931901159562,0.300091096084402,0,0,0,0.337552664482532,0.09743700516119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,0,0,0,0,0.203977659483963,0.26721740526556,0,3.25919801080088,0.378893491091197,0.803892390468535,0.829169439458779,0.517164979309476,1.0661699095049,0.23806443146374,0.0645889098360061,0.248298857183432,0.448527450322454,0.445530107947154,0.606351566874658,0.870866991587845,0.342233301085281,0.0673520530145875,0.215166616178029,0.332660356546013,0,0,0,0,0,0.366724332548599,0.406896178315738,1.33151354837103,1.20764276154616,0|short_description=p2@STARD8}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=9754 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19161 | |||
|TSSclassifier=S | |||
|UniProt=Q92502 | |||
|association_with_transcript=3bp_to_ENST00000374597,uc004dxc.3_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_STARD8_5end | |||
|id=chrX:67913496..67913505,+ | |||
|ontology_enrichment_celltype=CL:0000763!1.71e-37!112;CL:0000049!1.71e-37!112;CL:0002057!8.31e-31!42;CL:0000557!1.12e-28!71;CL:0002194!1.22e-28!63;CL:0000576!1.22e-28!63;CL:0000040!1.22e-28!63;CL:0000559!1.22e-28!63;CL:0002009!1.98e-28!65;CL:0000839!2.75e-28!70;CL:0000860!2.83e-27!45;CL:0000766!6.13e-25!76;CL:0000988!5.03e-18!182;CL:0002032!1.04e-17!165;CL:0000837!1.04e-17!165;CL:0000037!1.42e-17!172;CL:0000566!1.42e-17!172;CL:0002087!8.29e-10!119;CL:0002031!8.83e-10!124;CL:0000738!2.98e-09!140;CL:0002393!3.69e-07!9;CL:0002397!3.69e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.97e-52;33!CL:0002057;3.97e-52;33!CL:0000473;8.98e-44;39!CL:0000234;8.98e-44;39!CL:0000576;2.04e-42;48!CL:0000766;1.24e-25;69!CL:0000763;1.44e-21;100!CL:0002393;5.03e-13;6!CL:0002397;5.03e-13;6!CL:0002087;9.63e-10;104!CL:0000988;2.36e-08;177!CL:0000738;5.60e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.04e-66,42;CL:0002057,1.04e-66,42;CL:0000473,2.00e-66,48;CL:0000234,2.00e-66,48;CL:0000763,9.72e-62,108;CL:0000049,9.72e-62,108;CL:0002009,2.57e-59,61;CL:0002194,6.77e-59,59;CL:0000576,6.77e-59,59;CL:0000040,6.77e-59,59;CL:0000559,6.77e-59,59;CL:0000557,1.11e-55,67;CL:0000839,2.64e-51,66;CL:0000766,8.12e-51,72;CL:0002032,3.45e-37,161;CL:0000837,3.45e-37,161;CL:0000037,2.10e-36,168;CL:0000988,6.28e-35,177;CL:0002087,6.87e-27,115;CL:0002031,3.95e-25,120;CL:0000738,2.16e-24,136;CL:0002393,5.03e-11,9;CL:0002397,5.03e-11,9;CL:0000134,9.85e-11,354;CL:0002320,3.33e-10,361;CL:0000219,7.40e-09,386;CL:0000048,5.57e-08,427;CL:0000034,1.22e-07,441;CL:0000723,1.22e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;6.17e-49;42!CL:0000049;1.47e-19;108 | |||
|ontology_enrichment_disease=DOID:8692!6.48e-12!31;DOID:1240!3.25e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:1036;2.54e-11;8!DOID:8692;2.46e-10;31!DOID:1240;5.04e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,5.11e-11,8;DOID:8692,9.81e-11,31;DOID:1240,8.22e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.50e-25!80;UBERON:0002390!4.75e-25!102;UBERON:0003061!4.75e-25!102;UBERON:0001474!3.35e-22!86;UBERON:0002193!1.86e-21!112;UBERON:0003081!4.33e-19!216;UBERON:0007023!1.96e-18!115;UBERON:0002405!1.75e-17!115;UBERON:0004765!1.00e-15!101;UBERON:0001434!1.00e-15!101;UBERON:0002204!2.37e-08!167;UBERON:0001049!2.76e-07!57;UBERON:0005068!2.76e-07!57;UBERON:0006241!2.76e-07!57;UBERON:0007135!2.76e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.15e-50,76;UBERON:0001474,3.56e-45,82;UBERON:0002390,5.85e-43,98;UBERON:0003061,5.85e-43,98;UBERON:0002405,8.17e-42,93;UBERON:0004765,6.00e-40,90;UBERON:0002193,3.00e-39,108;UBERON:0001434,1.36e-34,100;UBERON:0003081,1.73e-21,203;UBERON:0002204,2.31e-17,167;UBERON:0000926,1.94e-11,315;UBERON:0004120,1.94e-11,315;UBERON:0006603,1.94e-11,315;UBERON:0002384,4.94e-10,371 | |||
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| |||
|short_description=p2@STARD8 | |||
}} |
Revision as of 12:23, 14 September 2013
Short description: | p2@STARD8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_STARD8_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 3bp_to_ENST00000374597, uc004dxc.3_5end |
EntrezGene: | STARD8 |
HGNC: | 19161 |
UniProt: | Q92502 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.04e-66 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.04e-66 | 42 |
defensive cell | 2.00e-66 | 48 |
phagocyte | 2.00e-66 | 48 |
myeloid cell | 9.72e-62 | 108 |
common myeloid progenitor | 9.72e-62 | 108 |
macrophage dendritic cell progenitor | 2.57e-59 | 61 |
monopoietic cell | 6.77e-59 | 59 |
monocyte | 6.77e-59 | 59 |
monoblast | 6.77e-59 | 59 |
promonocyte | 6.77e-59 | 59 |
granulocyte monocyte progenitor cell | 1.11e-55 | 67 |
myeloid lineage restricted progenitor cell | 2.64e-51 | 66 |
myeloid leukocyte | 8.12e-51 | 72 |
hematopoietic oligopotent progenitor cell | 3.45e-37 | 161 |
hematopoietic multipotent progenitor cell | 3.45e-37 | 161 |
hematopoietic stem cell | 2.10e-36 | 168 |
hematopoietic cell | 6.28e-35 | 177 |
nongranular leukocyte | 6.87e-27 | 115 |
hematopoietic lineage restricted progenitor cell | 3.95e-25 | 120 |
leukocyte | 2.16e-24 | 136 |
intermediate monocyte | 5.03e-11 | 9 |
CD14-positive, CD16-positive monocyte | 5.03e-11 | 9 |
mesenchymal cell | 9.85e-11 | 354 |
connective tissue cell | 3.33e-10 | 361 |
motile cell | 7.40e-09 | 386 |
multi fate stem cell | 5.57e-08 | 427 |
stem cell | 1.22e-07 | 441 |
somatic stem cell | 1.22e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.15e-50 | 76 |
bone element | 3.56e-45 | 82 |
hematopoietic system | 5.85e-43 | 98 |
blood island | 5.85e-43 | 98 |
immune system | 8.17e-42 | 93 |
skeletal element | 6.00e-40 | 90 |
hemolymphoid system | 3.00e-39 | 108 |
skeletal system | 1.36e-34 | 100 |
lateral plate mesoderm | 1.73e-21 | 203 |
musculoskeletal system | 2.31e-17 | 167 |
mesoderm | 1.94e-11 | 315 |
mesoderm-derived structure | 1.94e-11 | 315 |
presumptive mesoderm | 1.94e-11 | 315 |
connective tissue | 4.94e-10 | 371 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 5.11e-11 | 8 |
myeloid leukemia | 9.81e-11 | 31 |
leukemia | 8.22e-08 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.