FFCP PHASE1:Mm9::chr7:134085551..134085567,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=233877|HGNC=|MCL_coexpression_id=20|UniProt=|association_with_transcript=0bp_to_ENSMUST00000139233_5end|description=CAGE_peak_2_at_Kctd13_5end|id=chr7:134085551..134085567,+|ontology_enrichment_celltype=CL:0002610!6.61e-07!3;CL:0002614!8.94e-07!3|ontology_enrichment_celltype_v019_2=CL:0002610,2.33e-12,3;CL:0002614,4.27e-12,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!1.75e-21!50;UBERON:0006238!1.75e-21!50;UBERON:0002616!3.43e-20!49;UBERON:0000033!2.65e-18!63;UBERON:0001049!1.02e-16!52;UBERON:0005068!1.02e-16!52;UBERON:0006241!1.02e-16!52;UBERON:0007135!1.02e-16!52;UBERON:0001017!3.28e-16!73;UBERON:0005743!3.28e-16!73;UBERON:0000073!1.47e-15!75;UBERON:0001016!1.47e-15!75;UBERON:0007811!2.93e-13!86;UBERON:0002346!1.36e-12!71;UBERON:0003075!1.36e-12!71;UBERON:0007284!1.36e-12!71;UBERON:0000153!2.12e-12!94;UBERON:0002298!2.18e-12!6;UBERON:0004121!4.12e-11!102;UBERON:0000924!4.12e-11!102;UBERON:0006601!4.12e-11!102;UBERON:0003080!8.44e-11!40;UBERON:0003056!3.63e-10!49;UBERON:0002021!4.31e-10!10;UBERON:0000411!4.31e-10!10;UBERON:0001950!4.31e-10!10;UBERON:0000064!1.08e-09!99;UBERON:0002780!1.13e-09!39;UBERON:0001890!1.13e-09!39;UBERON:0006240!1.13e-09!39;UBERON:0002791!2.10e-09!29;UBERON:0003528!2.10e-09!29;UBERON:0001893!2.10e-09!29;UBERON:0002020!9.39e-09!34;UBERON:0002950!1.25e-08!4;UBERON:0001891!1.25e-08!4;UBERON:0009616!1.25e-08!4;UBERON:0007023!1.91e-08!51;UBERON:0004733!3.33e-08!6;UBERON:0004732!3.33e-08!6;UBERON:0002028!3.33e-08!6;UBERON:0007277!3.33e-08!6;UBERON:0003076!3.61e-07!12;UBERON:0003057!3.61e-07!12;UBERON:0004684!6.61e-07!3;UBERON:0002275!6.61e-07!3;UBERON:0002619!6.73e-07!17;UBERON:0002038!8.94e-07!3;UBERON:0002308!8.94e-07!3;UBERON:0009663!8.94e-07!3;UBERON:0009661!8.94e-07!3;UBERON:0006331!8.94e-07!3;UBERON:0000125!8.94e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.13e-24,54;UBERON:0000955,1.13e-22,47;UBERON:0006238,1.13e-22,47;UBERON:0001017,1.29e-21,73;UBERON:0001016,6.09e-21,75;UBERON:0002616,1.30e-20,46;UBERON:0001049,2.01e-20,52;UBERON:0005068,2.01e-20,52;UBERON:0006241,2.01e-20,52;UBERON:0007135,2.01e-20,52;UBERON:0002346,5.59e-16,64;UBERON:0003075,5.59e-16,64;UBERON:0007284,5.59e-16,64;UBERON:0002950,7.98e-16,4;UBERON:0001891,7.98e-16,4;UBERON:0009616,7.98e-16,4;UBERON:0010286,7.98e-16,4;UBERON:0004121,9.35e-16,95;UBERON:0000924,9.35e-16,95;UBERON:0006601,9.35e-16,95;UBERON:0010371,1.34e-13,73;UBERON:0003080,1.98e-13,40;UBERON:0004684,2.33e-12,3;UBERON:0002275,2.33e-12,3;UBERON:0002038,4.27e-12,3;UBERON:0009663,4.27e-12,3;UBERON:0009661,4.27e-12,3;UBERON:0000125,4.27e-12,3;UBERON:0002308,4.27e-12,3;UBERON:0002780,1.45e-11,39;UBERON:0001890,1.45e-11,39;UBERON:0006240,1.45e-11,39;UBERON:0003528,4.92e-11,29;UBERON:0002791,4.92e-11,29;UBERON:0001893,4.92e-11,29;UBERON:0004733,1.45e-10,6;UBERON:0004732,1.45e-10,6;UBERON:0002028,1.45e-10,6;UBERON:0007277,1.45e-10,6;UBERON:0003056,1.58e-10,49;UBERON:0010314,4.22e-10,92;UBERON:0001896,3.06e-09,2;UBERON:0002298,3.06e-09,2;UBERON:0005290,3.06e-09,2;UBERON:0010096,3.06e-09,2;UBERON:0002020,3.58e-09,34;UBERON:0003076,4.88e-08,12;UBERON:0003057,4.88e-08,12;UBERON:0002420,6.60e-08,8;UBERON:0007245,6.60e-08,8;UBERON:0010009,6.60e-08,8;UBERON:0010011,6.60e-08,8;UBERON:0000454,6.60e-08,8;UBERON:0000025,1.68e-07,114;UBERON:0007023,3.81e-07,51;UBERON:0004111,8.71e-07,122|phase1_expression=0,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0.159992422793407,0.68822784320151,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0.662605622854841,0,0,0,19.82085857989,21.8345348125671,30.1068805182237,0,0,0,28.4766658981409,11.2552522006336,20.3221669543157,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8328894894272,7.95897485891129,0.255457055208591,0,0,0,32.3547781114417,29.2800385803921,0,8.34356736922927,2.81287003063364,29.7136903720171,18.4955039897244,0,0,0,0.841767423545896,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.1408762966172,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,47.041322866423,43.0166889793386,0,0,0,0,0,0,0,0,0,0,0,3.53453448063988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,59.3360966433631,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.171853182343688,2.74033007908257,2.2661816921691,0.675022500231806,3.60256962579376,4.07828168085784,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@Kctd13}} | ||
|EntrezGene=233877 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000139233_5end | |||
|description=CAGE_peak_2_at_Kctd13_5end | |||
|id=chr7:134085551..134085567,+ | |||
|ontology_enrichment_celltype=CL:0002610!6.61e-07!3;CL:0002614!8.94e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,2.33e-12,3;CL:0002614,4.27e-12,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!1.75e-21!50;UBERON:0006238!1.75e-21!50;UBERON:0002616!3.43e-20!49;UBERON:0000033!2.65e-18!63;UBERON:0001049!1.02e-16!52;UBERON:0005068!1.02e-16!52;UBERON:0006241!1.02e-16!52;UBERON:0007135!1.02e-16!52;UBERON:0001017!3.28e-16!73;UBERON:0005743!3.28e-16!73;UBERON:0000073!1.47e-15!75;UBERON:0001016!1.47e-15!75;UBERON:0007811!2.93e-13!86;UBERON:0002346!1.36e-12!71;UBERON:0003075!1.36e-12!71;UBERON:0007284!1.36e-12!71;UBERON:0000153!2.12e-12!94;UBERON:0002298!2.18e-12!6;UBERON:0004121!4.12e-11!102;UBERON:0000924!4.12e-11!102;UBERON:0006601!4.12e-11!102;UBERON:0003080!8.44e-11!40;UBERON:0003056!3.63e-10!49;UBERON:0002021!4.31e-10!10;UBERON:0000411!4.31e-10!10;UBERON:0001950!4.31e-10!10;UBERON:0000064!1.08e-09!99;UBERON:0002780!1.13e-09!39;UBERON:0001890!1.13e-09!39;UBERON:0006240!1.13e-09!39;UBERON:0002791!2.10e-09!29;UBERON:0003528!2.10e-09!29;UBERON:0001893!2.10e-09!29;UBERON:0002020!9.39e-09!34;UBERON:0002950!1.25e-08!4;UBERON:0001891!1.25e-08!4;UBERON:0009616!1.25e-08!4;UBERON:0007023!1.91e-08!51;UBERON:0004733!3.33e-08!6;UBERON:0004732!3.33e-08!6;UBERON:0002028!3.33e-08!6;UBERON:0007277!3.33e-08!6;UBERON:0003076!3.61e-07!12;UBERON:0003057!3.61e-07!12;UBERON:0004684!6.61e-07!3;UBERON:0002275!6.61e-07!3;UBERON:0002619!6.73e-07!17;UBERON:0002038!8.94e-07!3;UBERON:0002308!8.94e-07!3;UBERON:0009663!8.94e-07!3;UBERON:0009661!8.94e-07!3;UBERON:0006331!8.94e-07!3;UBERON:0000125!8.94e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.13e-24,54;UBERON:0000955,1.13e-22,47;UBERON:0006238,1.13e-22,47;UBERON:0001017,1.29e-21,73;UBERON:0001016,6.09e-21,75;UBERON:0002616,1.30e-20,46;UBERON:0001049,2.01e-20,52;UBERON:0005068,2.01e-20,52;UBERON:0006241,2.01e-20,52;UBERON:0007135,2.01e-20,52;UBERON:0002346,5.59e-16,64;UBERON:0003075,5.59e-16,64;UBERON:0007284,5.59e-16,64;UBERON:0002950,7.98e-16,4;UBERON:0001891,7.98e-16,4;UBERON:0009616,7.98e-16,4;UBERON:0010286,7.98e-16,4;UBERON:0004121,9.35e-16,95;UBERON:0000924,9.35e-16,95;UBERON:0006601,9.35e-16,95;UBERON:0010371,1.34e-13,73;UBERON:0003080,1.98e-13,40;UBERON:0004684,2.33e-12,3;UBERON:0002275,2.33e-12,3;UBERON:0002038,4.27e-12,3;UBERON:0009663,4.27e-12,3;UBERON:0009661,4.27e-12,3;UBERON:0000125,4.27e-12,3;UBERON:0002308,4.27e-12,3;UBERON:0002780,1.45e-11,39;UBERON:0001890,1.45e-11,39;UBERON:0006240,1.45e-11,39;UBERON:0003528,4.92e-11,29;UBERON:0002791,4.92e-11,29;UBERON:0001893,4.92e-11,29;UBERON:0004733,1.45e-10,6;UBERON:0004732,1.45e-10,6;UBERON:0002028,1.45e-10,6;UBERON:0007277,1.45e-10,6;UBERON:0003056,1.58e-10,49;UBERON:0010314,4.22e-10,92;UBERON:0001896,3.06e-09,2;UBERON:0002298,3.06e-09,2;UBERON:0005290,3.06e-09,2;UBERON:0010096,3.06e-09,2;UBERON:0002020,3.58e-09,34;UBERON:0003076,4.88e-08,12;UBERON:0003057,4.88e-08,12;UBERON:0002420,6.60e-08,8;UBERON:0007245,6.60e-08,8;UBERON:0010009,6.60e-08,8;UBERON:0010011,6.60e-08,8;UBERON:0000454,6.60e-08,8;UBERON:0000025,1.68e-07,114;UBERON:0007023,3.81e-07,51;UBERON:0004111,8.71e-07,122 | |||
|phase1_expression=0,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0.159992422793407,0.68822784320151,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0.662605622854841,0,0,0,19.82085857989,21.8345348125671,30.1068805182237,0,0,0,28.4766658981409,11.2552522006336,20.3221669543157,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8328894894272,7.95897485891129,0.255457055208591,0,0,0,32.3547781114417,29.2800385803921,0,8.34356736922927,2.81287003063364,29.7136903720171,18.4955039897244,0,0,0,0.841767423545896,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.1408762966172,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,47.041322866423,43.0166889793386,0,0,0,0,0,0,0,0,0,0,0,3.53453448063988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,59.3360966433631,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.171853182343688,2.74033007908257,2.2661816921691,0.675022500231806,3.60256962579376,4.07828168085784,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@Kctd13 | |||
}} |
Revision as of 11:51, 14 September 2013
Short description: | p2@Kctd13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Kctd13_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 0bp_to_ENSMUST00000139233_5end |
EntrezGene: | Kctd13 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 2.33e-12 | 3 |
neuron of the substantia nigra | 4.27e-12 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.