FFCP PHASE1:Hg19::chrX:25540398..25540420,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C186|description=CAGE_peak_at_chrX:25540398..25540420,+|id=chrX:25540398..25540420,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000054;4.89e-09;2!CL:0000137;4.89e-09;2!CL:0000092;4.89e-09;2!CL:0002092;4.81e-07;10|ontology_enrichment_celltype_v019_2=CL:0000054,5.08e-09,2;CL:0000137,5.08e-09,2;CL:0000092,5.08e-09,2;CL:0002092,4.96e-07,10|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:162!4.27e-10!235;DOID:14566!8.47e-10!239;DOID:0060085!1.41e-08!1;DOID:3165!1.41e-08!1;DOID:0060121!1.41e-08!1;DOID:2438!1.41e-08!1;DOID:4418!1.41e-08!1;DOID:4960!1.88e-08!1;DOID:0070004!1.88e-08!1;DOID:0050687!5.21e-08!143|ontology_enrichment_disease_v019=DOID:0060085;9.57e-17;1!DOID:3165;9.57e-17;1!DOID:0060121;9.57e-17;1!DOID:2438;9.57e-17;1!DOID:4418;9.57e-17;1!DOID:4960;1.78e-16;1!DOID:0070004;1.78e-16;1!DOID:200;4.89e-09;2!DOID:1909;4.89e-09;2!DOID:4305;4.89e-09;2!DOID:3910;6.67e-09;2|ontology_enrichment_disease_v019_2=DOID:0060085,1.04e-16,1;DOID:3165,1.04e-16,1;DOID:0060121,1.04e-16,1;DOID:2438,1.04e-16,1;DOID:4418,1.04e-16,1;DOID:4960,1.93e-16,1;DOID:0070004,1.93e-16,1;DOID:1909,4.70e-09,2;DOID:200,5.08e-09,2;DOID:4305,5.08e-09,2;DOID:3910,5.94e-09,2|ontology_enrichment_uberon=UBERON:0007195!2.02e-08!1;UBERON:0001282!3.33e-08!1;UBERON:0009842!3.33e-08!1;UBERON:0003704!3.33e-08!1;UBERON:0001171!3.33e-08!1;UBERON:0001172!3.33e-08!1|ontology_enrichment_uberon_v019=UBERON:0007195;1.78e-16;1!UBERON:0002371;4.78e-12;12!UBERON:0004903;6.67e-09;2!UBERON:0002173;6.67e-09;2!UBERON:0002186;6.67e-09;2!UBERON:0001474;3.19e-08;18|ontology_enrichment_uberon_v019_2=UBERON:0007195,2.25e-16,1;UBERON:0004903,5.94e-09,2;UBERON:0002173,5.94e-09,2;UBERON:0002186,5.94e-09,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.63592496756373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06103206853459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22273980289274,0,0,0,0,0,0,0,2.54253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0.569261198172555,6.03959000125439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4961441142365,0,0,0,0,0,0,0,0,0,0,0,0,3.57686301065381,0,0,0.480952921509202,0,0.999048047910651,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76656284657122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.71104933608458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2387947355906,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.7018538392652,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,4.93380195354699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chrX:25540398..25540420,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C186 | |||
|description=CAGE_peak_at_chrX:25540398..25540420,+ | |||
|id=chrX:25540398..25540420,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000054;4.89e-09;2!CL:0000137;4.89e-09;2!CL:0000092;4.89e-09;2!CL:0002092;4.81e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,5.08e-09,2;CL:0000137,5.08e-09,2;CL:0000092,5.08e-09,2;CL:0002092,4.96e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.27e-10!235;DOID:14566!8.47e-10!239;DOID:0060085!1.41e-08!1;DOID:3165!1.41e-08!1;DOID:0060121!1.41e-08!1;DOID:2438!1.41e-08!1;DOID:4418!1.41e-08!1;DOID:4960!1.88e-08!1;DOID:0070004!1.88e-08!1;DOID:0050687!5.21e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:0060085;9.57e-17;1!DOID:3165;9.57e-17;1!DOID:0060121;9.57e-17;1!DOID:2438;9.57e-17;1!DOID:4418;9.57e-17;1!DOID:4960;1.78e-16;1!DOID:0070004;1.78e-16;1!DOID:200;4.89e-09;2!DOID:1909;4.89e-09;2!DOID:4305;4.89e-09;2!DOID:3910;6.67e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,1.04e-16,1;DOID:3165,1.04e-16,1;DOID:0060121,1.04e-16,1;DOID:2438,1.04e-16,1;DOID:4418,1.04e-16,1;DOID:4960,1.93e-16,1;DOID:0070004,1.93e-16,1;DOID:1909,4.70e-09,2;DOID:200,5.08e-09,2;DOID:4305,5.08e-09,2;DOID:3910,5.94e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007195!2.02e-08!1;UBERON:0001282!3.33e-08!1;UBERON:0009842!3.33e-08!1;UBERON:0003704!3.33e-08!1;UBERON:0001171!3.33e-08!1;UBERON:0001172!3.33e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.78e-16;1!UBERON:0002371;4.78e-12;12!UBERON:0004903;6.67e-09;2!UBERON:0002173;6.67e-09;2!UBERON:0002186;6.67e-09;2!UBERON:0001474;3.19e-08;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,2.25e-16,1;UBERON:0004903,5.94e-09,2;UBERON:0002173,5.94e-09,2;UBERON:0002186,5.94e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.63592496756373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06103206853459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22273980289274,0,0,0,0,0,0,0,2.54253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0.569261198172555,6.03959000125439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4961441142365,0,0,0,0,0,0,0,0,0,0,0,0,3.57686301065381,0,0,0.480952921509202,0,0.999048047910651,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76656284657122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.71104933608458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2387947355906,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.7018538392652,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,4.93380195354699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chrX:25540398..25540420,+ | |||
}} |
Revision as of 11:39, 14 September 2013
Short description: | p@chrX:25540398..25540420, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:25540398..25540420, + |
Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 5.08e-09 | 2 |
osteocyte | 5.08e-09 | 2 |
osteoclast | 5.08e-09 | 2 |
bone marrow cell | 4.96e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 2.25e-16 | 1 |
bronchoalveolar duct junction | 5.94e-09 | 2 |
alveolar duct | 5.94e-09 | 2 |
bronchiole | 5.94e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 1.04e-16 | 1 |
skin benign neoplasm | 1.04e-16 | 1 |
integumentary system benign neoplasm | 1.04e-16 | 1 |
dermis tumor | 1.04e-16 | 1 |
cutaneous fibrous histiocytoma | 1.04e-16 | 1 |
bone marrow cancer | 1.93e-16 | 1 |
myeloma | 1.93e-16 | 1 |
melanoma | 4.70e-09 | 2 |
giant cell tumor | 5.08e-09 | 2 |
bone giant cell tumor | 5.08e-09 | 2 |
lung adenocarcinoma | 5.94e-09 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.