FFCP PHASE1:Mm9::chr7:127883398..127883422,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=233813|HGNC=|MCL_coexpression_id=10|UniProt=Q3UVV9|association_with_transcript=-138bp_to_ENSMUST00000166668,ENSMUST00000167213_5end|description=CAGE_peak_3_at_Vwa3a_5end|id=chr7:127883398..127883422,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.50e-07!51;UBERON:0007100!4.82e-07!18;UBERON:0000948!4.82e-07!18;UBERON:0005498!4.82e-07!18;UBERON:0004140!4.82e-07!18;UBERON:0009881!4.82e-07!18;UBERON:0004141!4.82e-07!18;UBERON:0003084!4.82e-07!18;UBERON:0007005!4.82e-07!18;UBERON:0004139!4.82e-07!18;UBERON:0004291!4.82e-07!18;UBERON:0004535!7.77e-07!23;UBERON:0001009!7.77e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0001911,2.67e-09,2;UBERON:0000076,2.67e-09,2;UBERON:0005333,2.67e-09,2;UBERON:0008425,2.67e-09,2;UBERON:0005311,2.67e-09,2;UBERON:0004535,7.33e-09,23;UBERON:0001009,7.33e-09,23;UBERON:0007100,1.39e-08,18;UBERON:0000948,1.39e-08,18;UBERON:0005498,1.39e-08,18;UBERON:0004140,1.39e-08,18;UBERON:0009881,1.39e-08,18;UBERON:0004141,1.39e-08,18;UBERON:0003084,1.39e-08,18;UBERON:0007005,1.39e-08,18;UBERON:0004139,1.39e-08,18;UBERON:0004291,1.39e-08,18|phase1_expression=0,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514518872071894,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.776813650941515,0.742210695324124,0,0,0,0,0,0.753999547978053,0,4.33798070759735,0,0.485300549842228,0.220841518460394,0,1.86391761218122,0.292780797011547,0.209446706813455,0,0,0,0,1.3481157546434,0.915001205637253,0.125654352112864,0.695297280769106,0,0.41557608911912,0.486723789203273,0,0.870848794270651,0,1.05220927943237,0,0,0,0,0.136072998302656,0.2562274405697,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0.308534225774757,0.232533944750408,0,1.40118410840603,0.658239399653922,2.46251196118643,10.2957388123237,10.9649990568999,6.36695334344047,14.091673969839,0.210289948564127,0,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0.0701358198903186,0.189709611372772,0.442830443938806,2.04098346193787,0.863780147452604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0.162964976442026,0,0,0,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0,0.345369963731791,0.289298117163023,0,0,1.47529281905711,1.37968373152366,1.12385412991454,0.820481806145422,0,5.30188947129183,0,0,0,0,0,0,0,0,0,0.642642632843614,0.851640511249612,0.178065603667255,0,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0,0.712994756769443,1.58018378967908,1.05418608574999,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0.441056796109924,0.32977250588296,0.161464426695906,0.120625849856312,0.119372344003136,0,0.291480836629851,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,1.24267862617385,0,0,0,0,0,0,0,0,0,0,1.15212002503146,0.316011120628178,0,0,0,0,0,0,0,0.100966449948148,0,0.302478555410522,0.0974578807397524,0,0.116876902181569,0.906921534460845,0,0,0,0,0.93841237725591,0.183151624267265,0,0.501572104035363,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0,0,0.280924522409647,0.320125762024346,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0.271608227691724,0,0,0.197008964751127,0.409231043169689,0,0,0,0.233931608445408,0.859484216193193,1.53030665655075,0.661774257358546,1.39120701372253|short_description=p3@Vwa3a}} | ||
|EntrezGene=233813 | |||
|HGNC= | |||
|MCL_coexpression_id=10 | |||
|UniProt=Q3UVV9 | |||
|association_with_transcript=-138bp_to_ENSMUST00000166668,ENSMUST00000167213_5end | |||
|description=CAGE_peak_3_at_Vwa3a_5end | |||
|id=chr7:127883398..127883422,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.50e-07!51;UBERON:0007100!4.82e-07!18;UBERON:0000948!4.82e-07!18;UBERON:0005498!4.82e-07!18;UBERON:0004140!4.82e-07!18;UBERON:0009881!4.82e-07!18;UBERON:0004141!4.82e-07!18;UBERON:0003084!4.82e-07!18;UBERON:0007005!4.82e-07!18;UBERON:0004139!4.82e-07!18;UBERON:0004291!4.82e-07!18;UBERON:0004535!7.77e-07!23;UBERON:0001009!7.77e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,2.67e-09,2;UBERON:0000076,2.67e-09,2;UBERON:0005333,2.67e-09,2;UBERON:0008425,2.67e-09,2;UBERON:0005311,2.67e-09,2;UBERON:0004535,7.33e-09,23;UBERON:0001009,7.33e-09,23;UBERON:0007100,1.39e-08,18;UBERON:0000948,1.39e-08,18;UBERON:0005498,1.39e-08,18;UBERON:0004140,1.39e-08,18;UBERON:0009881,1.39e-08,18;UBERON:0004141,1.39e-08,18;UBERON:0003084,1.39e-08,18;UBERON:0007005,1.39e-08,18;UBERON:0004139,1.39e-08,18;UBERON:0004291,1.39e-08,18 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514518872071894,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.776813650941515,0.742210695324124,0,0,0,0,0,0.753999547978053,0,4.33798070759735,0,0.485300549842228,0.220841518460394,0,1.86391761218122,0.292780797011547,0.209446706813455,0,0,0,0,1.3481157546434,0.915001205637253,0.125654352112864,0.695297280769106,0,0.41557608911912,0.486723789203273,0,0.870848794270651,0,1.05220927943237,0,0,0,0,0.136072998302656,0.2562274405697,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0.308534225774757,0.232533944750408,0,1.40118410840603,0.658239399653922,2.46251196118643,10.2957388123237,10.9649990568999,6.36695334344047,14.091673969839,0.210289948564127,0,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0.0701358198903186,0.189709611372772,0.442830443938806,2.04098346193787,0.863780147452604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0.162964976442026,0,0,0,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0,0.345369963731791,0.289298117163023,0,0,1.47529281905711,1.37968373152366,1.12385412991454,0.820481806145422,0,5.30188947129183,0,0,0,0,0,0,0,0,0,0.642642632843614,0.851640511249612,0.178065603667255,0,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0,0.712994756769443,1.58018378967908,1.05418608574999,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0.441056796109924,0.32977250588296,0.161464426695906,0.120625849856312,0.119372344003136,0,0.291480836629851,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,1.24267862617385,0,0,0,0,0,0,0,0,0,0,1.15212002503146,0.316011120628178,0,0,0,0,0,0,0,0.100966449948148,0,0.302478555410522,0.0974578807397524,0,0.116876902181569,0.906921534460845,0,0,0,0,0.93841237725591,0.183151624267265,0,0.501572104035363,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0,0,0.280924522409647,0.320125762024346,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0.271608227691724,0,0,0.197008964751127,0.409231043169689,0,0,0,0.233931608445408,0.859484216193193,1.53030665655075,0.661774257358546,1.39120701372253 | |||
|short_description=p3@Vwa3a | |||
}} |
Revision as of 11:38, 14 September 2013
Short description: | p3@Vwa3a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Vwa3a_5end |
Coexpression cluster: | MCL_coexpression_mm9:10 |
Association with transcript: | -138bp_to_ENSMUST00000166668, ENSMUST00000167213_5end |
EntrezGene: | Vwa3a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland | 2.67e-09 | 2 |
external ectoderm | 2.67e-09 | 2 |
mammary bud | 2.67e-09 | 2 |
mammary ridge | 2.67e-09 | 2 |
mammary placode | 2.67e-09 | 2 |
cardiovascular system | 7.33e-09 | 23 |
circulatory system | 7.33e-09 | 23 |
primary circulatory organ | 1.39e-08 | 18 |
heart | 1.39e-08 | 18 |
primitive heart tube | 1.39e-08 | 18 |
primary heart field | 1.39e-08 | 18 |
anterior lateral plate mesoderm | 1.39e-08 | 18 |
heart tube | 1.39e-08 | 18 |
heart primordium | 1.39e-08 | 18 |
cardiac mesoderm | 1.39e-08 | 18 |
cardiogenic plate | 1.39e-08 | 18 |
heart rudiment | 1.39e-08 | 18 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.