FFCP PHASE1:Hg19::chr9:34992668..34992684,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=25822|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14887|TSSclassifier=W|UniProt=Q5T657|association_with_transcript=-184bp_to_ENST00000443266_5end|coexpression_cluster_id=C0|description=CAGE_peak_4_at_DNAJB5_5end|id=chr9:34992668..34992684,+|ontology_enrichment_celltype=CL:0002057!2.31e-37!42;CL:0000860!5.91e-34!45;CL:0002009!3.91e-26!65;CL:0000766!8.09e-26!76;CL:0002194!9.94e-26!63;CL:0000576!9.94e-26!63;CL:0000040!9.94e-26!63;CL:0000559!9.94e-26!63;CL:0000557!2.05e-25!71;CL:0000839!2.00e-24!70;CL:0000763!1.60e-15!112;CL:0000049!1.60e-15!112;CL:0002031!4.39e-12!124;CL:0000738!6.25e-12!140;CL:0002087!1.66e-11!119;CL:0002032!1.21e-08!165;CL:0000837!1.21e-08!165;CL:0000037!3.50e-08!172;CL:0000566!3.50e-08!172;CL:0000988!6.21e-08!182|ontology_enrichment_celltype_v019=CL:0000860;3.52e-122;33!CL:0002057;3.52e-122;33!CL:0000473;3.96e-82;39!CL:0000234;3.96e-82;39!CL:0000576;3.11e-59;48!CL:0000766;4.36e-35;69!CL:0000763;6.46e-17;100!CL:0000767;8.02e-16;3!CL:0002087;3.76e-14;104!CL:0000738;1.75e-09;136|ontology_enrichment_celltype_v019_2=CL:0000860,3.82e-109,42;CL:0002057,3.82e-109,42;CL:0000473,9.38e-95,48;CL:0000234,9.38e-95,48;CL:0002194,1.34e-74,59;CL:0000576,1.34e-74,59;CL:0000040,1.34e-74,59;CL:0000559,1.34e-74,59;CL:0000766,1.85e-73,72;CL:0002009,5.34e-72,61;CL:0000839,3.57e-66,66;CL:0000557,4.12e-65,67;CL:0000763,4.20e-47,108;CL:0000049,4.20e-47,108;CL:0000738,3.65e-36,136;CL:0002087,1.23e-35,115;CL:0002031,6.58e-34,120;CL:0002032,1.39e-29,161;CL:0000837,1.39e-29,161;CL:0000037,4.33e-28,168;CL:0000988,2.43e-26,177;CL:0000767,7.42e-16,3;CL:0000134,8.33e-11,354;CL:0002320,1.83e-10,361;CL:0000219,2.90e-09,386;CL:0000048,8.56e-08,427;CL:0000723,1.37e-07,433;CL:0000034,2.50e-07,441|ontology_enrichment_development_v019=CL:0002057;1.22e-79;42!CL:0000049;2.28e-14;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!3.24e-22!80;UBERON:0001474!1.18e-19!86;UBERON:0004765!2.29e-18!101;UBERON:0001434!2.29e-18!101;UBERON:0002390!7.79e-18!102;UBERON:0003061!7.79e-18!102;UBERON:0002193!1.22e-15!112;UBERON:0002405!2.92e-13!115;UBERON:0002204!5.70e-13!167;UBERON:0003081!2.94e-07!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.62e-57,76;UBERON:0001474,3.03e-52,82;UBERON:0004765,4.09e-47,90;UBERON:0002405,2.05e-45,93;UBERON:0002390,8.22e-43,98;UBERON:0003061,8.22e-43,98;UBERON:0001434,7.66e-42,100;UBERON:0002193,2.55e-38,108;UBERON:0002204,1.77e-24,167;UBERON:0003081,4.88e-19,203;UBERON:0000926,5.07e-10,315;UBERON:0004120,5.07e-10,315;UBERON:0006603,5.07e-10,315;UBERON:0002384,5.32e-10,371|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,3.93364276848904,1.15148819429164,1.70297735647684,0,0.30120591877825,0.369754010166788,0,0,0,2.76997704265939,0.601633342410425,0.651032612147555,0,0,0,2.18097358169347,4.1566353805769,1.94067248950253,5.57829688573643,8.22335776043652,17.6532631410209,3.45230870786581,7.68482119587302,8.27687804610048,5.17118521104928,22.5919639254339,5.41705946377367,6.58848188399116,8.46009065179322,9.43838634669355,7.34601341690166,9.62787081228281,9.59005688698562,0.329851300186716,1.19678194572979,1.27867425159808,11.3181603065148,7.37600792098482,9.34233373493363,4.01997864410789,6.77927793946262,10.4250645458456,6.05399502633369,14.362827803515,10.4432587855492,0,0.212604299965044,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0.193260853163297,0.272746120590835,0,0,0.132529768321485,0.116193942869518,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.445893486866185,0,0.335964256397719,0,0,0,0,0.492663237895943,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,0.197030760201927,0,0.128343036279748,0.508189248444927,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0.355123450626254,0,0.519254429183621,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0.096670718292122,0,0.307007349452259,0,0.107420244868274,0,0.0852266274161009,0.356128142586949,0,0.384380134730212,0.382838137483752,0.10115778085555,0,0.31481234683064,0.69703727016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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=25822 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14887 | |||
|TSSclassifier=W | |||
|UniProt=Q5T657 | |||
|association_with_transcript=-184bp_to_ENST00000443266_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_4_at_DNAJB5_5end | |||
|id=chr9:34992668..34992684,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.31e-37!42;CL:0000860!5.91e-34!45;CL:0002009!3.91e-26!65;CL:0000766!8.09e-26!76;CL:0002194!9.94e-26!63;CL:0000576!9.94e-26!63;CL:0000040!9.94e-26!63;CL:0000559!9.94e-26!63;CL:0000557!2.05e-25!71;CL:0000839!2.00e-24!70;CL:0000763!1.60e-15!112;CL:0000049!1.60e-15!112;CL:0002031!4.39e-12!124;CL:0000738!6.25e-12!140;CL:0002087!1.66e-11!119;CL:0002032!1.21e-08!165;CL:0000837!1.21e-08!165;CL:0000037!3.50e-08!172;CL:0000566!3.50e-08!172;CL:0000988!6.21e-08!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.52e-122;33!CL:0002057;3.52e-122;33!CL:0000473;3.96e-82;39!CL:0000234;3.96e-82;39!CL:0000576;3.11e-59;48!CL:0000766;4.36e-35;69!CL:0000763;6.46e-17;100!CL:0000767;8.02e-16;3!CL:0002087;3.76e-14;104!CL:0000738;1.75e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.82e-109,42;CL:0002057,3.82e-109,42;CL:0000473,9.38e-95,48;CL:0000234,9.38e-95,48;CL:0002194,1.34e-74,59;CL:0000576,1.34e-74,59;CL:0000040,1.34e-74,59;CL:0000559,1.34e-74,59;CL:0000766,1.85e-73,72;CL:0002009,5.34e-72,61;CL:0000839,3.57e-66,66;CL:0000557,4.12e-65,67;CL:0000763,4.20e-47,108;CL:0000049,4.20e-47,108;CL:0000738,3.65e-36,136;CL:0002087,1.23e-35,115;CL:0002031,6.58e-34,120;CL:0002032,1.39e-29,161;CL:0000837,1.39e-29,161;CL:0000037,4.33e-28,168;CL:0000988,2.43e-26,177;CL:0000767,7.42e-16,3;CL:0000134,8.33e-11,354;CL:0002320,1.83e-10,361;CL:0000219,2.90e-09,386;CL:0000048,8.56e-08,427;CL:0000723,1.37e-07,433;CL:0000034,2.50e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.22e-79;42!CL:0000049;2.28e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.24e-22!80;UBERON:0001474!1.18e-19!86;UBERON:0004765!2.29e-18!101;UBERON:0001434!2.29e-18!101;UBERON:0002390!7.79e-18!102;UBERON:0003061!7.79e-18!102;UBERON:0002193!1.22e-15!112;UBERON:0002405!2.92e-13!115;UBERON:0002204!5.70e-13!167;UBERON:0003081!2.94e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.62e-57,76;UBERON:0001474,3.03e-52,82;UBERON:0004765,4.09e-47,90;UBERON:0002405,2.05e-45,93;UBERON:0002390,8.22e-43,98;UBERON:0003061,8.22e-43,98;UBERON:0001434,7.66e-42,100;UBERON:0002193,2.55e-38,108;UBERON:0002204,1.77e-24,167;UBERON:0003081,4.88e-19,203;UBERON:0000926,5.07e-10,315;UBERON:0004120,5.07e-10,315;UBERON:0006603,5.07e-10,315;UBERON:0002384,5.32e-10,371 | |||
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|short_description=p4@DNAJB5 | |||
}} |
Revision as of 08:52, 14 September 2013
Short description: | p4@DNAJB5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_DNAJB5_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -184bp_to_ENST00000443266_5end |
EntrezGene: | DNAJB5 |
HGNC: | 14887 |
UniProt: | Q5T657 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.82e-109 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.82e-109 | 42 |
defensive cell | 9.38e-95 | 48 |
phagocyte | 9.38e-95 | 48 |
monopoietic cell | 1.34e-74 | 59 |
monocyte | 1.34e-74 | 59 |
monoblast | 1.34e-74 | 59 |
promonocyte | 1.34e-74 | 59 |
myeloid leukocyte | 1.85e-73 | 72 |
macrophage dendritic cell progenitor | 5.34e-72 | 61 |
myeloid lineage restricted progenitor cell | 3.57e-66 | 66 |
granulocyte monocyte progenitor cell | 4.12e-65 | 67 |
myeloid cell | 4.20e-47 | 108 |
common myeloid progenitor | 4.20e-47 | 108 |
leukocyte | 3.65e-36 | 136 |
nongranular leukocyte | 1.23e-35 | 115 |
hematopoietic lineage restricted progenitor cell | 6.58e-34 | 120 |
hematopoietic oligopotent progenitor cell | 1.39e-29 | 161 |
hematopoietic multipotent progenitor cell | 1.39e-29 | 161 |
hematopoietic stem cell | 4.33e-28 | 168 |
hematopoietic cell | 2.43e-26 | 177 |
basophil | 7.42e-16 | 3 |
mesenchymal cell | 8.33e-11 | 354 |
connective tissue cell | 1.83e-10 | 361 |
motile cell | 2.90e-09 | 386 |
multi fate stem cell | 8.56e-08 | 427 |
somatic stem cell | 1.37e-07 | 433 |
stem cell | 2.50e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.62e-57 | 76 |
bone element | 3.03e-52 | 82 |
skeletal element | 4.09e-47 | 90 |
immune system | 2.05e-45 | 93 |
hematopoietic system | 8.22e-43 | 98 |
blood island | 8.22e-43 | 98 |
skeletal system | 7.66e-42 | 100 |
hemolymphoid system | 2.55e-38 | 108 |
musculoskeletal system | 1.77e-24 | 167 |
lateral plate mesoderm | 4.88e-19 | 203 |
mesoderm | 5.07e-10 | 315 |
mesoderm-derived structure | 5.07e-10 | 315 |
presumptive mesoderm | 5.07e-10 | 315 |
connective tissue | 5.32e-10 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.