FFCP PHASE1:Mm9::chr6:117887704..117887715,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=108017|HGNC=|MCL_coexpression_id=2800|UniProt=Q9D2W0|association_with_transcript=-163bp_to_uc009dlh.1,uc009dli.1_5end|description=CAGE_peak_3_at_Fxyd4_5end|id=chr6:117887704..117887715,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001008!1.19e-33!17;UBERON:0006554!3.80e-31!16;UBERON:0002113!1.83e-30!14;UBERON:0003918!1.83e-30!14;UBERON:0005095!1.83e-30!14;UBERON:0007687!1.83e-30!14;UBERON:0000489!4.43e-23!21;UBERON:0003100!1.12e-12!11;UBERON:0000474!1.35e-11!9;UBERON:0004175!2.71e-11!9;UBERON:0003103!7.04e-10!43;UBERON:0003975!1.66e-09!5;UBERON:0003134!5.17e-09!8;UBERON:0005795!3.67e-07!4;UBERON:0000995!3.67e-07!4;UBERON:0005172!5.76e-07!49;UBERON:0005173!5.76e-07!49;UBERON:0002417!5.76e-07!49;UBERON:0000916!5.76e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0006554,3.28e-26,18;UBERON:0002113,5.42e-25,14;UBERON:0003918,5.42e-25,14;UBERON:0011143,5.42e-25,14;UBERON:0005095,5.42e-25,14;UBERON:0007687,5.42e-25,14;UBERON:0001008,7.83e-25,19;UBERON:0000489,1.81e-22,21;UBERON:0000993,1.83e-11,1;UBERON:0000998,2.31e-11,1;UBERON:0007194,2.31e-11,1;UBERON:0006868,2.31e-11,1;UBERON:0003103,6.35e-11,43;UBERON:0001255,8.99e-11,1;UBERON:0001556,8.99e-11,1;UBERON:0003104,1.24e-07,61;UBERON:0009142,1.24e-07,61;UBERON:0005172,3.97e-07,49;UBERON:0005173,3.97e-07,49;UBERON:0002417,3.97e-07,49;UBERON:0000916,3.97e-07,49|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569003702859245,0.228497025219458,1.1270773567308,0.610953983535943,0.969762435838129,0.561086559122548,1.96033265085198,1.47610147979602,2.98297582898612,1.35736880313981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,6.10389454998381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0.238744688006273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15913756419314,0.187682475451182,1.46521299413812,0.214368379079066,3.00943262421218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0.177475806159338,0.238436189947321,0,0,0,0,0.263069711437843,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0|short_description=p3@Fxyd4}} | ||
|EntrezGene=108017 | |||
|HGNC= | |||
|MCL_coexpression_id=2800 | |||
|UniProt=Q9D2W0 | |||
|association_with_transcript=-163bp_to_uc009dlh.1,uc009dli.1_5end | |||
|description=CAGE_peak_3_at_Fxyd4_5end | |||
|id=chr6:117887704..117887715,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001008!1.19e-33!17;UBERON:0006554!3.80e-31!16;UBERON:0002113!1.83e-30!14;UBERON:0003918!1.83e-30!14;UBERON:0005095!1.83e-30!14;UBERON:0007687!1.83e-30!14;UBERON:0000489!4.43e-23!21;UBERON:0003100!1.12e-12!11;UBERON:0000474!1.35e-11!9;UBERON:0004175!2.71e-11!9;UBERON:0003103!7.04e-10!43;UBERON:0003975!1.66e-09!5;UBERON:0003134!5.17e-09!8;UBERON:0005795!3.67e-07!4;UBERON:0000995!3.67e-07!4;UBERON:0005172!5.76e-07!49;UBERON:0005173!5.76e-07!49;UBERON:0002417!5.76e-07!49;UBERON:0000916!5.76e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006554,3.28e-26,18;UBERON:0002113,5.42e-25,14;UBERON:0003918,5.42e-25,14;UBERON:0011143,5.42e-25,14;UBERON:0005095,5.42e-25,14;UBERON:0007687,5.42e-25,14;UBERON:0001008,7.83e-25,19;UBERON:0000489,1.81e-22,21;UBERON:0000993,1.83e-11,1;UBERON:0000998,2.31e-11,1;UBERON:0007194,2.31e-11,1;UBERON:0006868,2.31e-11,1;UBERON:0003103,6.35e-11,43;UBERON:0001255,8.99e-11,1;UBERON:0001556,8.99e-11,1;UBERON:0003104,1.24e-07,61;UBERON:0009142,1.24e-07,61;UBERON:0005172,3.97e-07,49;UBERON:0005173,3.97e-07,49;UBERON:0002417,3.97e-07,49;UBERON:0000916,3.97e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569003702859245,0.228497025219458,1.1270773567308,0.610953983535943,0.969762435838129,0.561086559122548,1.96033265085198,1.47610147979602,2.98297582898612,1.35736880313981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,6.10389454998381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0.238744688006273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15913756419314,0.187682475451182,1.46521299413812,0.214368379079066,3.00943262421218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0.177475806159338,0.238436189947321,0,0,0,0,0.263069711437843,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Fxyd4 | |||
}} |
Revision as of 08:39, 14 September 2013
Short description: | p3@Fxyd4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Fxyd4_5end |
Coexpression cluster: | MCL_coexpression_mm9:2800 |
Association with transcript: | -163bp_to_uc009dlh.1, uc009dli.1_5end |
EntrezGene: | Fxyd4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
urinary system structure | 3.28e-26 | 18 |
kidney | 5.42e-25 | 14 |
kidney mesenchyme | 5.42e-25 | 14 |
upper urinary tract | 5.42e-25 | 14 |
kidney rudiment | 5.42e-25 | 14 |
kidney field | 5.42e-25 | 14 |
renal system | 7.83e-25 | 19 |
cavitated compound organ | 1.81e-22 | 21 |
oviduct | 1.83e-11 | 1 |
seminal vesicle | 2.31e-11 | 1 |
vesicular gland | 2.31e-11 | 1 |
seminal fluid secreting gland | 2.31e-11 | 1 |
compound organ | 6.35e-11 | 43 |
urinary bladder | 8.99e-11 | 1 |
lower urinary tract | 8.99e-11 | 1 |
mesenchyme | 1.24e-07 | 61 |
entire embryonic mesenchyme | 1.24e-07 | 61 |
abdomen element | 3.97e-07 | 49 |
abdominal segment element | 3.97e-07 | 49 |
abdominal segment of trunk | 3.97e-07 | 49 |
abdomen | 3.97e-07 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.