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FFCP PHASE1:Mm9::chr5:93238398..93238462,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=27428|HGNC=|MCL_coexpression_id=2203|UniProt=Q9QXN0|association_with_transcript=0bp_to_ENSMUST00000113054,NM_001077595,uc008ydu.1_5end|description=CAGE_peak_1_at_Shroom3_5end|id=chr5:93238398..93238462,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.59e-18!43;UBERON:0005409!2.85e-18!59;UBERON:0000344!8.02e-09!15;UBERON:0001007!1.14e-08!128;UBERON:0001555!1.14e-08!128;UBERON:0007026!1.14e-08!128;UBERON:0004119!1.58e-08!130;UBERON:0000925!1.58e-08!130;UBERON:0006595!1.58e-08!130;UBERON:0000464!2.61e-08!57;UBERON:0004921!5.06e-08!126;UBERON:0004185!5.06e-08!126;UBERON:0001242!5.70e-08!13;UBERON:0000060!5.70e-08!13;UBERON:0001262!5.70e-08!13;UBERON:0004786!5.70e-08!13;UBERON:0000481!6.71e-08!230;UBERON:0005153!1.57e-07!17;UBERON:0002108!3.19e-07!16;UBERON:0003103!8.44e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.48e-14,31;UBERON:0005409,9.27e-14,47;UBERON:0000344,2.97e-09,15;UBERON:0001242,2.37e-08,13;UBERON:0001262,2.37e-08,13;UBERON:0004786,2.37e-08,13;UBERON:0005153,6.91e-08,17;UBERON:0005178,6.42e-07,17;UBERON:0005181,6.42e-07,17;UBERON:0002224,6.42e-07,17;UBERON:0000915,6.42e-07,17;UBERON:0008947,6.42e-07,17;UBERON:0003258,6.42e-07,17|phase1_expression=3.68342348341026,79.9153683494137,87.3598539627909,75.3135886154007,79.1415253315229,48.0134717668005,47.6569786814872,0,0,0,0,0,0,0,0,0,0,0,0,0,13.351796553718,0,0,33.7584012094088,27.7585230091276,59.1458923038471,37.4762936658395,42.8787753044919,51.6863700921337,28.4794046628722,17.7384408524244,0,0,0,19.9307617628379,16.4572298904907,24.2961533952219,0,0,0,0,0,0,0,0,0,0,13.5175596955877,20.6505011770404,32.8586529435539,1.81982348112971,11.5002051491977,0,0,0,0.257259436035947,1.14613375975503,18.0485232297105,0.202316460859598,1.05798195854407,0,2.03306719241479,0.889294796111139,0,0,0,5.99200221036809,8.4528027170742,0,0,0,0.571301968807607,0.220868540951614,0.489963196859816,0.0958454710182364,0,0,1.53224805702225,0.614426133024974,0.791317726381163,0.274462930807229,0.52091337055676,0.558365998002762,0,0.45839474333043,0.294628585473668,0,0.186399445825301,0,0,42.8999443278483,0,0,0.539703191637817,0,0,8.00533194750986,0,0,0,7.32385782838739,0,0,0,6.71122227134764,7.85415582972806,5.56076889516262,11.0758363327488,0,0,0.520455980298408,0.913396434936424,0.922461989024234,0.301445281105245,1.17588707135705,0.251333182659351,47.7086287727342,1.59059292611903,0,1.13236794963186,0.220841518460394,0,50.325775528893,0.585561594023094,3.56059401582874,82.7680858875836,0,0,0,0.149790639404823,0.457500602818626,0.251308704225729,0,0.511430914660661,1.0389402227978,0.973447578406546,4.48093200941392,8.21086006026614,21.4814344668623,20.8337437327609,1.69156575851515,1.37941262660084,1.0803727788321,2.10986744970001,1.15662048557257,1.0249097622788,0.937017245597288,14.4873887613849,0.431135985865684,2.83659120251729,2.28736461413134,2.41115305670332,0.834141747676794,3.1342694986995,1.85203922767149,4.17971960318836,0,0,0,8.28503090142008,15.4787199587523,9.36322719597277,17.0456209621351,15.7411385397923,10.3358965634543,19.9979192485351,23.8763327245661,42.9696459911184,35.8740472811387,24.132617219627,29.9954595319666,22.5147980635012,27.4437644113813,24.559774633148,0.841159794256509,1.23485534855141,171.487348368591,53.1545638993724,4.26576501070468,3.0190767341857,3.99489130098489,6.05050573870028,7.11609740303585,12.7451169495415,52.6727258314408,12.8465184684728,26.3901969240283,32.0319919986253,29.244613067868,49.4350674759822,53.1699602691748,50.5818834066093,3.79335801906163,6.62641373136427,13.5249282807697,11.4044743593376,13.1887691273986,17.7443624322506,33.5786012129806,37.1977572908597,34.3827213972611,31.5896739639809,1.48226313543574,0.667380422864376,0.196558995113203,0.224862112384854,0.405720242777006,1.20588579876208,1.01850340712568,2.01387296215567,0.972811360650212,0.823684239564244,4.31304619582064,4.46569137202204,1.5601883655728,1.76805214562978,1.4351793081753,0,62.2618250861458,3.03186258832776,7.65935389277522,7.97801903143384,11.4998221661366,27.4710262204578,27.6130623427776,51.9055503301745,38.9358805942292,32.5553093783699,25.5127629851979,46.5371813792696,43.5166154302057,49.469978034877,0,0,17.7035138286853,18.2118252561123,1.12385412991454,1.52375192569864,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,16.6069899693674,2.67098405500883,4.0721739838394,17.9817434040064,55.7529581027844,6.06951590387454,6.65111825322452,12.4479352638893,19.489924930131,19.6758494684114,26.6181141963268,19.9943551212628,21.746340081468,42.0328888054635,51.6551182017494,40.2228618667929,15.3197822589205,4.50152735078276,5.17434735131018,5.5727629108214,5.85222771019503,2.85390108163313,4.27827453565514,1.8267896946876,0.704015124191131,2.54198485036584,75.200183736742,0.65954501176592,1.13025098687134,0.784068024066026,1.19372344003136,1.47726809770555,48.6772997171851,1.29797711407357,0.341741761595705,3.92135049130123,2.40752885580625,0.565105371014073,0.683471138605126,0,0,0.139951452323658,0,65.8722726430428,4.9032079005076,4.67634774391752,4.10420295122845,8.57262013659322,18.3424553546789,23.4663962709588,27.5236007565369,52.61294433879,37.0698823614528,70.8326816919095,5.07323644815771,4.03694674318743,1.32366792365678,1.36115831840833,0.774958940866387,0.675824501963113,1.87771581833206,1.5624526181274,0.419437377702843,0.966336483304024,3.16833006883652,0.316011120628178,0.405450430580328,0.308132871494482,0.129920822977795,0.179026695667481,0.596044064343795,0.120195449519969,0,0.100966449948148,0,0,0,0.0962118416403295,0.116876902181569,5.44152920676507,6.21560669447381,0.538283139656854,0.503653849092235,2.31827512838629,5.2551093126331,6.41030684935428,0.643105137237198,76.2389598133752,0,0.460325236507177,0.572895513439397,0,0,0,0,0,0.453142408984205,0.51776031175182,1.3492355185943,1.59609949360412,3.24393850932855,3.40349403895612,3.98265008993166,1.83843508450014,5.11167473943715,4.53277125925567,8.66481865897901,3.53776096469316,4.56262739802432,4.71565853465191,5.43120743325318,4.1616349063165,4.93945033018274,6.19181798667996,5.2147946675185,3.8581844092741,3.70877310722976,6.03515572551029,6.17164654293748,4.96932257246145,4.76872379894642,5.23247099876383,4.14081273827455,5.16149108139227,4.93905526756486,6.83981249738391,5.16055632614275,4.48913817326191,4.03359061622192,3.84167481264697,3.27384834535751,3.25367366490529,3.66522560864169,2.49810577937946,5.14649538579898,7.73535794573874,2.29545998482612,2.20591419119516,0.463735671240843|short_description=p1@Shroom3}}
|EntrezGene=27428
|HGNC=
|MCL_coexpression_id=2203
|UniProt=Q9QXN0
|association_with_transcript=0bp_to_ENSMUST00000113054,NM_001077595,uc008ydu.1_5end
|description=CAGE_peak_1_at_Shroom3_5end
|id=chr5:93238398..93238462,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!2.59e-18!43;UBERON:0005409!2.85e-18!59;UBERON:0000344!8.02e-09!15;UBERON:0001007!1.14e-08!128;UBERON:0001555!1.14e-08!128;UBERON:0007026!1.14e-08!128;UBERON:0004119!1.58e-08!130;UBERON:0000925!1.58e-08!130;UBERON:0006595!1.58e-08!130;UBERON:0000464!2.61e-08!57;UBERON:0004921!5.06e-08!126;UBERON:0004185!5.06e-08!126;UBERON:0001242!5.70e-08!13;UBERON:0000060!5.70e-08!13;UBERON:0001262!5.70e-08!13;UBERON:0004786!5.70e-08!13;UBERON:0000481!6.71e-08!230;UBERON:0005153!1.57e-07!17;UBERON:0002108!3.19e-07!16;UBERON:0003103!8.44e-07!43
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.48e-14,31;UBERON:0005409,9.27e-14,47;UBERON:0000344,2.97e-09,15;UBERON:0001242,2.37e-08,13;UBERON:0001262,2.37e-08,13;UBERON:0004786,2.37e-08,13;UBERON:0005153,6.91e-08,17;UBERON:0005178,6.42e-07,17;UBERON:0005181,6.42e-07,17;UBERON:0002224,6.42e-07,17;UBERON:0000915,6.42e-07,17;UBERON:0008947,6.42e-07,17;UBERON:0003258,6.42e-07,17
|phase1_expression=3.68342348341026,79.9153683494137,87.3598539627909,75.3135886154007,79.1415253315229,48.0134717668005,47.6569786814872,0,0,0,0,0,0,0,0,0,0,0,0,0,13.351796553718,0,0,33.7584012094088,27.7585230091276,59.1458923038471,37.4762936658395,42.8787753044919,51.6863700921337,28.4794046628722,17.7384408524244,0,0,0,19.9307617628379,16.4572298904907,24.2961533952219,0,0,0,0,0,0,0,0,0,0,13.5175596955877,20.6505011770404,32.8586529435539,1.81982348112971,11.5002051491977,0,0,0,0.257259436035947,1.14613375975503,18.0485232297105,0.202316460859598,1.05798195854407,0,2.03306719241479,0.889294796111139,0,0,0,5.99200221036809,8.4528027170742,0,0,0,0.571301968807607,0.220868540951614,0.489963196859816,0.0958454710182364,0,0,1.53224805702225,0.614426133024974,0.791317726381163,0.274462930807229,0.52091337055676,0.558365998002762,0,0.45839474333043,0.294628585473668,0,0.186399445825301,0,0,42.8999443278483,0,0,0.539703191637817,0,0,8.00533194750986,0,0,0,7.32385782838739,0,0,0,6.71122227134764,7.85415582972806,5.56076889516262,11.0758363327488,0,0,0.520455980298408,0.913396434936424,0.922461989024234,0.301445281105245,1.17588707135705,0.251333182659351,47.7086287727342,1.59059292611903,0,1.13236794963186,0.220841518460394,0,50.325775528893,0.585561594023094,3.56059401582874,82.7680858875836,0,0,0,0.149790639404823,0.457500602818626,0.251308704225729,0,0.511430914660661,1.0389402227978,0.973447578406546,4.48093200941392,8.21086006026614,21.4814344668623,20.8337437327609,1.69156575851515,1.37941262660084,1.0803727788321,2.10986744970001,1.15662048557257,1.0249097622788,0.937017245597288,14.4873887613849,0.431135985865684,2.83659120251729,2.28736461413134,2.41115305670332,0.834141747676794,3.1342694986995,1.85203922767149,4.17971960318836,0,0,0,8.28503090142008,15.4787199587523,9.36322719597277,17.0456209621351,15.7411385397923,10.3358965634543,19.9979192485351,23.8763327245661,42.9696459911184,35.8740472811387,24.132617219627,29.9954595319666,22.5147980635012,27.4437644113813,24.559774633148,0.841159794256509,1.23485534855141,171.487348368591,53.1545638993724,4.26576501070468,3.0190767341857,3.99489130098489,6.05050573870028,7.11609740303585,12.7451169495415,52.6727258314408,12.8465184684728,26.3901969240283,32.0319919986253,29.244613067868,49.4350674759822,53.1699602691748,50.5818834066093,3.79335801906163,6.62641373136427,13.5249282807697,11.4044743593376,13.1887691273986,17.7443624322506,33.5786012129806,37.1977572908597,34.3827213972611,31.5896739639809,1.48226313543574,0.667380422864376,0.196558995113203,0.224862112384854,0.405720242777006,1.20588579876208,1.01850340712568,2.01387296215567,0.972811360650212,0.823684239564244,4.31304619582064,4.46569137202204,1.5601883655728,1.76805214562978,1.4351793081753,0,62.2618250861458,3.03186258832776,7.65935389277522,7.97801903143384,11.4998221661366,27.4710262204578,27.6130623427776,51.9055503301745,38.9358805942292,32.5553093783699,25.5127629851979,46.5371813792696,43.5166154302057,49.469978034877,0,0,17.7035138286853,18.2118252561123,1.12385412991454,1.52375192569864,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,16.6069899693674,2.67098405500883,4.0721739838394,17.9817434040064,55.7529581027844,6.06951590387454,6.65111825322452,12.4479352638893,19.489924930131,19.6758494684114,26.6181141963268,19.9943551212628,21.746340081468,42.0328888054635,51.6551182017494,40.2228618667929,15.3197822589205,4.50152735078276,5.17434735131018,5.5727629108214,5.85222771019503,2.85390108163313,4.27827453565514,1.8267896946876,0.704015124191131,2.54198485036584,75.200183736742,0.65954501176592,1.13025098687134,0.784068024066026,1.19372344003136,1.47726809770555,48.6772997171851,1.29797711407357,0.341741761595705,3.92135049130123,2.40752885580625,0.565105371014073,0.683471138605126,0,0,0.139951452323658,0,65.8722726430428,4.9032079005076,4.67634774391752,4.10420295122845,8.57262013659322,18.3424553546789,23.4663962709588,27.5236007565369,52.61294433879,37.0698823614528,70.8326816919095,5.07323644815771,4.03694674318743,1.32366792365678,1.36115831840833,0.774958940866387,0.675824501963113,1.87771581833206,1.5624526181274,0.419437377702843,0.966336483304024,3.16833006883652,0.316011120628178,0.405450430580328,0.308132871494482,0.129920822977795,0.179026695667481,0.596044064343795,0.120195449519969,0,0.100966449948148,0,0,0,0.0962118416403295,0.116876902181569,5.44152920676507,6.21560669447381,0.538283139656854,0.503653849092235,2.31827512838629,5.2551093126331,6.41030684935428,0.643105137237198,76.2389598133752,0,0.460325236507177,0.572895513439397,0,0,0,0,0,0.453142408984205,0.51776031175182,1.3492355185943,1.59609949360412,3.24393850932855,3.40349403895612,3.98265008993166,1.83843508450014,5.11167473943715,4.53277125925567,8.66481865897901,3.53776096469316,4.56262739802432,4.71565853465191,5.43120743325318,4.1616349063165,4.93945033018274,6.19181798667996,5.2147946675185,3.8581844092741,3.70877310722976,6.03515572551029,6.17164654293748,4.96932257246145,4.76872379894642,5.23247099876383,4.14081273827455,5.16149108139227,4.93905526756486,6.83981249738391,5.16055632614275,4.48913817326191,4.03359061622192,3.84167481264697,3.27384834535751,3.25367366490529,3.66522560864169,2.49810577937946,5.14649538579898,7.73535794573874,2.29545998482612,2.20591419119516,0.463735671240843
|short_description=p1@Shroom3
}}

Revision as of 08:21, 14 September 2013

Short description:p1@Shroom3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Shroom3_5end
Coexpression cluster:MCL_coexpression_mm9:2203
Association with transcript: 0bp_to_ENSMUST00000113054, NM_001077595, uc008ydu.1_5end
EntrezGene:Shroom3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Shroom3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.68
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I579.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I687.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I375.31
CD326+ enterocyte, pool2.CNhs13197.11849-124I479.14
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I748.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I847.66
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A313.35
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D133.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D227.76
GP2+ M cell, pool1.CNhs13228.11845-124H959.15
GP2+ M cell, pool2.CNhs13231.11846-124I137.48
GP2+ M cell, pool3.CNhs13240.11847-124I242.88
Ileum epithelium, pool1.CNhs13199.10252-104B951.69
Ileum epithelium, pool2.CNhs13232.10253-104C128.48
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C817.74
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F519.93
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F616.46
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F724.30
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C213.52
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B820.65
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C332.86
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C518.05
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C85.99
Mouse Microglia, donor2.CNhs12634.11736-123E88.45
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G342.90
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.01
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.32
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.71
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.85
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.56
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B611.08
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A847.71
aorta, adult.CNhs10498.46-23H11.59
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H450.33
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I23.56
colon, adult.CNhs10468.36-18H782.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.48
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.21
epididymis, adult.CNhs10490.58-23B221.48
eyeball, adult.CNhs10484.31-12G420.83
eyeball, embryo E12.CNhs11016.345-16C61.69
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C61.16
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A214.49
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H22.84
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I64.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E98.29
heart, embryo E12.CNhs11015.353-12F515.48
heart, embryo E13.CNhs11013.376-3I99.36
heart, embryo E14.CNhs10597.403-26D417.05
heart, embryo E15.CNhs11017.431-16C815.74
heart, embryo E16.CNhs11021.457-17C610.34
heart, embryo E17.CNhs11025.479-18E520.00
heart, embryo E18.CNhs11030.1283-20G323.88
heart, neonate N00.CNhs11213.639-21E342.97
heart, neonate N03.CNhs11221.1349-25I235.87
heart, neonate N10.CNhs11118.749-24G124.13
heart, neonate N16.CNhs11209.782-15G130.00
heart, neonate N20.CNhs11127.821-26I622.51
heart, neonate N25.CNhs11196.1351-25D327.44
heart, neonate N30.CNhs11202.1390-42D224.56
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G11.23
intestinal mucosa, adult.CNhs10506.860-29I3171.49
intestine, adult.CNhs10496.178-9A353.15
intestine, embryo E12.CNhs11019.1251-16I54.27
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D83.99
intestine, embryo E16.CNhs10585.463-22H46.05
intestine, embryo E17.CNhs10582.482-18D37.12
intestine, embryo E18.CNhs10526.1289-20F712.75
intestine, neonate N00.CNhs11126.644-26D152.67
intestine, neonate N01.CNhs11192.1322-23E912.85
intestine, neonate N06.CNhs11102.688-20B826.39
intestine, neonate N07.CNhs11095.720-20F232.03
intestine, neonate N10.CNhs11098.755-23A529.24
intestine, neonate N20.CNhs11187.827-18D149.44
intestine, neonate N25.CNhs11121.1352-25E353.17
intestine, neonate N30.CNhs11131.1384-42G150.58
kidney, embryo E14.CNhs10606.411-4I93.79
kidney, embryo E15.CNhs10997.434-16F86.63
kidney, embryo E16.CNhs10584.464-22A513.52
kidney, embryo E17.CNhs11028.483-18I211.40
kidney, embryo E18.CNhs11001.1288-20C713.19
kidney, neonate N00.CNhs11214.646-21G717.74
kidney, neonate N10.CNhs11206.758-6D533.58
kidney, neonate N20.CNhs11113.832-19I137.20
kidney, neonate N25.CNhs11122.1353-25F334.38
kidney, neonate N30.CNhs11203.1385-42H131.59
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H24.47
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H11.44
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B162.26
lung, embryo E12.CNhs10522.354-16G23.03
lung, embryo E14.CNhs10604.404-26F87.66
lung, embryo E15.CNhs11020.432-17C57.98
lung, embryo E16.CNhs10998.458-17B611.50
lung, embryo E17.CNhs10605.480-44A627.47
lung, embryo E18.CNhs10583.1287-20I627.61
lung, neonate N00.CNhs11224.640-42C651.91
lung, neonate N06.CNhs11212.683-20E538.94
lung, neonate N07.CNhs11111.715-19A332.56
lung, neonate N10.CNhs11219.750-23E625.51
lung, neonate N20.CNhs11109.822-18A446.54
lung, neonate N25.CNhs11119.1359-25C743.52
lung, neonate N30.CNhs11133.1394-42H249.47
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B617.70
mammary gland, adult pregnant day19.CNhs10476.588-5H218.21
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A31.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I716.61
ovary, embryo E18.CNhs11040.505-44H72.67
ovary, neonate N00.CNhs11217.1299-22I44.07
oviduct, adult pregnant day01.CNhs10500.988-6G617.98
pancreas, adult.CNhs10486.34-16E455.75
pancreas, embryo E14.CNhs11012.405-44F46.07
pancreas, embryo E15.CNhs11042.1556-45F26.65
pancreas, embryo E16.CNhs11003.460-26E512.45
pancreas, embryo E17.CNhs10599.1558-45G319.49
pancreas, embryo E18.CNhs10580.1535-43I719.68
pancreas, neonate N00.CNhs11105.645-26G926.62
pancreas, neonate N01.CNhs11138.1531-43D719.99
pancreas, neonate N02.CNhs11139.1539-43D821.75
pancreas, neonate N16.CNhs11136.787-43B642.03
pancreas, neonate N25.CNhs11094.1555-45E251.66
pancreas, neonate N30.CNhs11182.1548-44H540.22
pituitary gland, adult.CNhs10493.21-1G815.32
pituitary gland, embryo E12.CNhs11018.346-16E64.50
pituitary gland, embryo E13.CNhs11009.370-44C75.17
pituitary gland, embryo E14.CNhs11037.398-44A55.57
pituitary gland, embryo E15.CNhs10592.427-16B95.85
pituitary gland, embryo E16.CNhs11036.449-43F62.85
pituitary gland, embryo E17.CNhs11039.1265-44F54.28
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G32.54
prostate, adult.CNhs10470.859-1F875.20
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H30.78
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I148.68
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C13.92
spleen, embryo E18.CNhs11011.1271-21F22.41
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H665.87
stomach, embryo E12.CNhs10588.356-43E34.90
stomach, embryo E15.CNhs10603.1252-16G84.68
stomach, embryo E16.CNhs11022.459-17D44.10
stomach, embryo E17.CNhs11006.1035-18D58.57
stomach, embryo E18.CNhs10999.1286-20C618.34
stomach, neonate N03.CNhs11193.1340-24B823.47
stomach, neonate N07.CNhs11210.718-18A927.52
stomach, neonate N25.CNhs11104.1355-25E452.61
stomach, neonate N30.CNhs11134.1386-42I137.07
submandibular gland, adult.CNhs10469.59-29C170.83
testis, adult.CNhs10504.57-7G55.07
testis, embryo E13.CNhs11031.389-23F54.04
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B71.88
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E23.17
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B45.44
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E42.32
uterus, adult pregnant day19.CNhs10497.590-15F55.26
uterus, adult.CNhs10509.92-27E56.41
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F876.24
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H23.24
whole body, embryo E14.5.CNhs10578.420-27D23.40
whole body, embryo E14.CNhs10519.395-14B13.98
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.66
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.72
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.43
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.16
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.21
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.97
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.77
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.23
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.14
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.16
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.16
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.03
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.25
whole body, embryo E17.5.CNhs10513.490-9F93.67
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B35.15
whole body, neonate N00.CNhs10525.657-19C27.74
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B40.46





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
intestine1.48e-1431
gastrointestinal system9.27e-1447
mucosa2.97e-0915
intestinal mucosa2.37e-0813
wall of intestine2.37e-0813
gastrointestinal system mucosa2.37e-0813
epithelial bud6.91e-0817
thoracic cavity element6.42e-0717
thoracic segment organ6.42e-0717
thoracic cavity6.42e-0717
thoracic segment of trunk6.42e-0717
respiratory primordium6.42e-0717
endoderm of foregut6.42e-0717







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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