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FFCP PHASE1:Mm9::chr5:65194720..65194738,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=16599|HGNC=|MCL_coexpression_id=1384|UniProt=Q60980,Q545J5|association_with_transcript=-23bp_to_ENSMUST00000165536,NM_008453,uc008xmr.1,uc008xms.1_5end|description=CAGE_peak_2_at_Klf3_5end|id=chr5:65194720..65194738,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004921!3.38e-15!126;UBERON:0004185!3.38e-15!126;UBERON:0004119!6.25e-15!130;UBERON:0000925!6.25e-15!130;UBERON:0006595!6.25e-15!130;UBERON:0001007!6.72e-15!128;UBERON:0001555!6.72e-15!128;UBERON:0007026!6.72e-15!128;UBERON:0003104!1.86e-12!131;UBERON:0009142!1.86e-12!131;UBERON:0000926!2.94e-11!193;UBERON:0004120!2.94e-11!193;UBERON:0006603!2.94e-11!193;UBERON:0000077!7.95e-11!97;UBERON:0001041!1.81e-10!92;UBERON:0002405!5.02e-10!70;UBERON:0005911!1.61e-09!69;UBERON:0005057!7.08e-09!51;UBERON:0000490!6.58e-08!66;UBERON:0003929!2.61e-07!55;UBERON:0009569!9.20e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0004921,5.06e-15,114;UBERON:0004119,1.05e-14,118;UBERON:0000925,1.05e-14,118;UBERON:0006595,1.05e-14,118;UBERON:0001007,1.07e-14,116;UBERON:0001555,1.07e-14,116;UBERON:0007026,1.07e-14,116;UBERON:0001041,1.64e-10,80;UBERON:0005911,1.42e-09,69;UBERON:0002100,1.27e-08,90;UBERON:0000490,6.53e-08,66;UBERON:0003929,2.34e-07,55;UBERON:0005177,3.63e-07,79;UBERON:0009569,9.03e-07,66|phase1_expression=2.7225304007815,8.02643437570531,7.27998783023258,10.2837831844322,10.0179145989269,6.37941233265181,6.54115393667472,12.3958390503913,5.490760163915,5.14941957908386,0.513653904676515,0.797721589953364,12.6688540149092,11.7143339241457,20.9859149943868,25.9168342258977,46.1710839564577,10.567982539501,11.5176124228821,10.1853516431527,2.72138528483423,0.893618560807968,0.783599367416806,2.3998863419011,5.04700418347774,5.7423196411502,4.73838195774982,7.75696437669201,6.84084310042946,4.53654233567875,2.88249663851896,1.27006134691926,2.46025915033828,0,4.33277429626912,3.32469290716985,3.47087905646027,24.6933662134776,14.0640362014284,10.470474879476,15.2940186888064,16.3930916390027,14.5653105909346,3.39921408534059,6.38674666682942,4.58866880404204,4.69434806608824,2.61630187656536,3.07560655828261,4.6663175777828,3.63964696225943,0,7.55021727259814,9.42970784614748,20.8378155468328,5.40244815675489,4.87106847895886,5.67239301505187,0.809265843438391,0.528990979272033,0.633831403506179,3.72728985276045,4.4464739805557,4.94944844504769,3.9554654502679,11.3676818391376,4.19440154725767,3.84218305321555,1.55534418462716,0.945041568321835,2.52389953621658,1.42825492201902,0.441737081903227,0.489963196859816,0.575072826109418,0,1.10115880999389,0.893811366596314,0.768032666281217,0.923204014111357,0.823388792421687,0,0.279182999001381,0,1.06958773443767,1.76777151284201,1.85083185038834,1.1183966749518,3.25622631332691,3.02286240427142,11.3047150593654,5.16254326188832,9.51959867190851,2.69851595818909,1.94932925234301,1.79210754838934,3.23022166303029,2.89731548382698,0.519572009205738,3.5333957451034,0.845060518660083,1.28326477414318,12.7402619853323,0,3.68034769719064,3.80039798212648,6.0662933401774,5.82337786567206,15.5362730188303,3.56261133755579,2.77576522825817,2.43572382649713,3.22861696158482,2.71300752994721,7.05532242814229,3.89566433121994,15.3260879995312,6.2177723475562,15.9229899350977,5.98537344805414,9.71702681225732,11.1521308221101,7.45567044872489,0.878342391034642,0.83778682725382,7.40825460104915,1.7972268675888,2.39961092397363,2.41433431438823,0.748953197024114,0.457500602818626,1.38219787324151,0.695297280769106,0.255715457330331,0.83115217823824,1.29793010454206,7.12875546952214,9.33052279575698,2.77995034277042,5.6819301089348,3.513251959993,3.21862946206862,3.60124259610698,2.86339153887859,3.60593445502038,4.09963904911519,3.37326208415024,2.84573707812917,2.58681591519411,3.40390944302075,3.51902248327898,4.16471891612392,2.50242524303038,4.52727816478817,3.70407845534298,1.79130840136644,2.1066395619397,2.31613116403244,3.40996199274711,3.31401236056803,4.22146907965973,2.52086886045421,4.97163944728941,2.55793501271625,2.46827380619805,2.55787339225449,1.87791380979733,4.43708300995244,2.63295759861569,3.94001913789829,5.59374785866405,4.38599962275997,3.07370161407471,4.02619256281115,0.420579897128254,1.74937841044784,5.94753809370836,7.1401652999157,3.62590025909898,3.71578674976702,7.21657783403723,4.23535401709019,8.2279876222602,6.84812254005213,1.89811624617805,8.07024878147653,6.53471542880701,8.55512829776949,6.23885078781184,7.19055526923377,5.18731319699266,5.77509692437665,4.74169752382704,4.11294645395024,6.76246414038483,3.86937522906097,3.10323979468201,6.59276706968994,5.1853960441891,4.72352473534727,2.66897837330337,4.07210640941942,2.66807364378434,9.34332592010127,11.596980711679,10.3436571697033,20.4888722602388,15.6765153839071,9.16653066413111,13.2340223227373,20.2669033468794,5.49122826376163,11.5014565221884,8.18710084870708,4.99260276983297,4.79899868099512,3.946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|EntrezGene=16599
|HGNC=
|MCL_coexpression_id=1384
|UniProt=Q60980,Q545J5
|association_with_transcript=-23bp_to_ENSMUST00000165536,NM_008453,uc008xmr.1,uc008xms.1_5end
|description=CAGE_peak_2_at_Klf3_5end
|id=chr5:65194720..65194738,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004921!3.38e-15!126;UBERON:0004185!3.38e-15!126;UBERON:0004119!6.25e-15!130;UBERON:0000925!6.25e-15!130;UBERON:0006595!6.25e-15!130;UBERON:0001007!6.72e-15!128;UBERON:0001555!6.72e-15!128;UBERON:0007026!6.72e-15!128;UBERON:0003104!1.86e-12!131;UBERON:0009142!1.86e-12!131;UBERON:0000926!2.94e-11!193;UBERON:0004120!2.94e-11!193;UBERON:0006603!2.94e-11!193;UBERON:0000077!7.95e-11!97;UBERON:0001041!1.81e-10!92;UBERON:0002405!5.02e-10!70;UBERON:0005911!1.61e-09!69;UBERON:0005057!7.08e-09!51;UBERON:0000490!6.58e-08!66;UBERON:0003929!2.61e-07!55;UBERON:0009569!9.20e-07!66
|ontology_enrichment_uberon_v019_2=UBERON:0004921,5.06e-15,114;UBERON:0004119,1.05e-14,118;UBERON:0000925,1.05e-14,118;UBERON:0006595,1.05e-14,118;UBERON:0001007,1.07e-14,116;UBERON:0001555,1.07e-14,116;UBERON:0007026,1.07e-14,116;UBERON:0001041,1.64e-10,80;UBERON:0005911,1.42e-09,69;UBERON:0002100,1.27e-08,90;UBERON:0000490,6.53e-08,66;UBERON:0003929,2.34e-07,55;UBERON:0005177,3.63e-07,79;UBERON:0009569,9.03e-07,66
|phase1_expression=2.7225304007815,8.02643437570531,7.27998783023258,10.2837831844322,10.0179145989269,6.37941233265181,6.54115393667472,12.3958390503913,5.490760163915,5.14941957908386,0.513653904676515,0.797721589953364,12.6688540149092,11.7143339241457,20.9859149943868,25.9168342258977,46.1710839564577,10.567982539501,11.5176124228821,10.1853516431527,2.72138528483423,0.893618560807968,0.783599367416806,2.3998863419011,5.04700418347774,5.7423196411502,4.73838195774982,7.75696437669201,6.84084310042946,4.53654233567875,2.88249663851896,1.27006134691926,2.46025915033828,0,4.33277429626912,3.32469290716985,3.47087905646027,24.6933662134776,14.0640362014284,10.470474879476,15.2940186888064,16.3930916390027,14.5653105909346,3.39921408534059,6.38674666682942,4.58866880404204,4.69434806608824,2.61630187656536,3.07560655828261,4.6663175777828,3.63964696225943,0,7.55021727259814,9.42970784614748,20.8378155468328,5.40244815675489,4.87106847895886,5.67239301505187,0.809265843438391,0.528990979272033,0.633831403506179,3.72728985276045,4.4464739805557,4.94944844504769,3.9554654502679,11.3676818391376,4.19440154725767,3.84218305321555,1.55534418462716,0.945041568321835,2.52389953621658,1.42825492201902,0.441737081903227,0.489963196859816,0.575072826109418,0,1.10115880999389,0.893811366596314,0.768032666281217,0.923204014111357,0.823388792421687,0,0.279182999001381,0,1.06958773443767,1.76777151284201,1.85083185038834,1.1183966749518,3.25622631332691,3.02286240427142,11.3047150593654,5.16254326188832,9.51959867190851,2.69851595818909,1.94932925234301,1.79210754838934,3.23022166303029,2.89731548382698,0.519572009205738,3.5333957451034,0.845060518660083,1.28326477414318,12.7402619853323,0,3.68034769719064,3.80039798212648,6.0662933401774,5.82337786567206,15.5362730188303,3.56261133755579,2.77576522825817,2.43572382649713,3.22861696158482,2.71300752994721,7.05532242814229,3.89566433121994,15.3260879995312,6.2177723475562,15.9229899350977,5.98537344805414,9.71702681225732,11.1521308221101,7.45567044872489,0.878342391034642,0.83778682725382,7.40825460104915,1.7972268675888,2.39961092397363,2.41433431438823,0.748953197024114,0.457500602818626,1.38219787324151,0.695297280769106,0.255715457330331,0.83115217823824,1.29793010454206,7.12875546952214,9.33052279575698,2.77995034277042,5.6819301089348,3.513251959993,3.21862946206862,3.60124259610698,2.86339153887859,3.60593445502038,4.09963904911519,3.37326208415024,2.84573707812917,2.58681591519411,3.40390944302075,3.51902248327898,4.16471891612392,2.50242524303038,4.52727816478817,3.70407845534298,1.79130840136644,2.1066395619397,2.31613116403244,3.40996199274711,3.31401236056803,4.22146907965973,2.52086886045421,4.97163944728941,2.55793501271625,2.46827380619805,2.55787339225449,1.87791380979733,4.43708300995244,2.63295759861569,3.94001913789829,5.59374785866405,4.38599962275997,3.07370161407471,4.02619256281115,0.420579897128254,1.74937841044784,5.94753809370836,7.1401652999157,3.62590025909898,3.71578674976702,7.21657783403723,4.23535401709019,8.2279876222602,6.84812254005213,1.89811624617805,8.07024878147653,6.53471542880701,8.55512829776949,6.23885078781184,7.19055526923377,5.18731319699266,5.77509692437665,4.74169752382704,4.11294645395024,6.76246414038483,3.86937522906097,3.10323979468201,6.59276706968994,5.1853960441891,4.72352473534727,2.66897837330337,4.07210640941942,2.66807364378434,9.34332592010127,11.596980711679,10.3436571697033,20.4888722602388,15.6765153839071,9.16653066413111,13.2340223227373,20.2669033468794,5.49122826376163,11.5014565221884,8.18710084870708,4.99260276983297,4.79899868099512,3.94674309748207,5.78932225636041,11.0851914099963,3.41084541186873,3.91115943460862,3.73439188705414,3.98973422090454,6.19773152534718,6.66522194480839,9.75668239288994,6.77831119656621,9.96591103419487,7.81328366421687,8.68475567993411,7.59813920209941,7.5217510462386,3.01582567878545,3.26343410291226,0.491764273019036,4.96686143348518,0.80275294993896,1.05490517932983,5.40985319743029,4.54447668967871,2.2085575359138,2.34263246577983,5.38558494331997,1.91175038362042,3.7875774594007,7.92614286208731,2.83367491172426,3.21481443702443,1.97643888973262,3.53453448063988,5.10984306749767,3.73937767701236,8.63300884573953,7.9185659026817,5.30980553359851,2.91336763385978,2.41858845571801,3.96070667487386,4.42952839321159,7.07100840271033,7.75284879504663,4.72593848320757,7.84294232446387,4.74055136903724,2.10837217149998,7.21948802737308,1.70219802876894,3.06103859853227,2.19909762430683,1.92903331528433,3.72414490648775,3.92411398724555,1.81003922662333,5.48036908406279,3.75474732901937,5.50763384245932,2.8668691747145,12.036696464728,7.75029248140347,6.6947346670253,3.22305328808468,4.26766339337159,5.53813589596716,1.48340241608408,14.8657666294132,5.57244543500701,7.59297562215818,16.9531611304222,19.1371918809435,18.0734756833153,4.75939603982795,3.35883485576779,6.90999869022119,3.81868247206045,4.4287039101359,5.89626454667861,3.45617090629764,3.76358932826044,2.40198820120795,5.79916689454729,8.34799902825893,4.4498510137285,8.68420321055012,3.10669656543463,1.69107881605257,5.23307911153926,2.81279433777066,4.4723773319131,2.0665571756437,1.85851738039856,5.8678619322877,2.47388331203505,1.57289016638566,0.966336483304024,0.576060012515731,12.324433704499,3.44632865993279,4.72470402958205,4.41730798124503,8.23522800070415,6.95384741734427,7.81270421879797,10.485956429395,10.1976114447629,10.6689529317,9.98179232854721,10.8178247621125,8.08179469778768,9.81765978325179,4.0811469050738,1.99787358036658,1.52513556236109,2.68615386182526,10.2390484837061,8.63339387075437,6.41030684935428,7.28852488868824,6.01886524842436,0.564751842617067,0.460325236507177,0.572895513439397,0.859265911718438,0.685082519770642,0.755393897389701,0,0,0,0,4.04770655578289,5.1873233542134,3.41467211508268,8.265628380322,4.40187641518763,4.77993121970037,3.33370091702423,3.7086310303001,6.4183841918363,3.79045817645696,5.83002389747551,4.33840585187975,3.83930180626518,4.9939618875798,3.96304735793732,4.76293691283074,4.1718357340148,4.82273051159263,1.64834360321323,3.53277408322554,2.05721551431249,3.72699192934609,3.57654284920981,3.92435324907287,4.70546902076653,4.82303264982556,4.75612729469209,2.36762740294059,2.98769050460896,5.61142271657738,4.74540072496697,5.81176446015824,3.6830793885272,4.64810523557898,5.40138510747196,3.74715866906919,2.33931608445408,7.30561583764214,8.03410994689142,5.51478547798789,4.40548887678801
|short_description=p2@Klf3
}}

Revision as of 07:49, 14 September 2013

Short description:p2@Klf3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Klf3_5end
Coexpression cluster:MCL_coexpression_mm9:1384
Association with transcript: -23bp_to_ENSMUST00000165536, NM_008453, uc008xmr.1, uc008xms.1_5end
EntrezGene:Klf3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Klf3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I58.03
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I67.28
CD326+ enterocyte, pool1.CNhs13542.11848-124I310.28
CD326+ enterocyte, pool2.CNhs13197.11849-124I410.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.38
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.54
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E912.40
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.49
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.15
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.80
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E412.67
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E811.71
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A120.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A325.92
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A546.17
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A210.57
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A411.52
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A610.19
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.72
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.05
GP2+ M cell, pool1.CNhs13228.11845-124H95.74
GP2+ M cell, pool2.CNhs13231.11846-124I14.74
GP2+ M cell, pool3.CNhs13240.11847-124I27.76
Ileum epithelium, pool1.CNhs13199.10252-104B96.84
Ileum epithelium, pool2.CNhs13232.10253-104C14.54
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.33
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G824.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H114.06
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H310.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G915.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H216.39
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H414.57
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D96.39
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.59
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.62
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.08
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.67
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.64
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A27.55
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I99.43
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A120.84
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.40
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.67
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.73
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D211.37
Mouse Microglia, donor1.CNhs12629.11718-123C84.19
Mouse Microglia, donor2.CNhs12634.11736-123E83.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D93.26
Mouse Schwann, donor2.CNhs12573.11746-123F93.02
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.30
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C49.52
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.23
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.53
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.68
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.80
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.07
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.82
accessory axillary lymph node, adult.CNhs10475.1063-29H915.54
adrenal gland, adult.CNhs10508.49-24D73.56
adrenal gland, embryo E14.CNhs11038.406-44C52.78
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I13.23
adrenal gland, embryo E18.CNhs11026.1262-18F52.71
adrenal gland, neonate N00.CNhs11191.1311-23C17.06
adrenal gland, neonate N25.CNhs11223.1377-27I33.90
amnion, adult pregnant day17.5.CNhs10488.583-22A815.33
aorta, adult.CNhs10498.46-23H16.22
bone (os femoris), adult.CNhs10483.56-12G215.92
bone (os femoris), neonate N02.CNhs11227.1985-43F55.99
bone (os femoris), neonate N16.CNhs11225.1525-43A69.72
bone (os femoris), neonate N20.CNhs11195.1350-25C311.15
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H77.41
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.80
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.41
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B17.13
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.33
epididymis, adult.CNhs10490.58-23B22.78
eyeball, adult.CNhs10484.31-12G45.68
eyeball, embryo E12.CNhs11016.345-16C63.51
eyeball, embryo E14.CNhs10521.399-16E23.22
eyeball, embryo E15.CNhs10593.426-16C93.60
eyeball, embryo E17.CNhs11023.1261-18D42.86
eyeball, neonate N00.CNhs11207.633-15C63.61
eyeball, neonate N01.CNhs11140.1532-43E74.10
eyeball, neonate N02.CNhs11205.1551-44G83.37
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E22.59
forelimb, embryo E12.CNhs10600.359-14H23.40
forelimb, embryo E13.CNhs10589.384-1E23.52
forelimb, embryo E14.CNhs10577.413-26A84.16
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C44.53
forelimb, embryo E18.CNhs11008.1520-43B53.70
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.32
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.41
heart, embryo E11.CNhs10586.331-24E93.31
heart, embryo E12.CNhs11015.353-12F54.22
heart, embryo E13.CNhs11013.376-3I92.52
heart, embryo E14.CNhs10597.403-26D44.97
heart, embryo E15.CNhs11017.431-16C82.56
heart, embryo E16.CNhs11021.457-17C62.47
heart, embryo E17.CNhs11025.479-18E52.56
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E34.44
heart, neonate N03.CNhs11221.1349-25I22.63
heart, neonate N10.CNhs11118.749-24G13.94
heart, neonate N16.CNhs11209.782-15G15.59
heart, neonate N20.CNhs11127.821-26I64.39
heart, neonate N25.CNhs11196.1351-25D33.07
heart, neonate N30.CNhs11202.1390-42D24.03
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G11.75
intestinal mucosa, adult.CNhs10506.860-29I35.95
intestine, adult.CNhs10496.178-9A37.14
intestine, embryo E12.CNhs11019.1251-16I53.63
intestine, embryo E13.CNhs11010.381-16D53.72
intestine, embryo E15.CNhs10602.976-16D87.22
intestine, embryo E16.CNhs10585.463-22H44.24
intestine, embryo E17.CNhs10582.482-18D38.23
intestine, embryo E18.CNhs10526.1289-20F76.85
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E98.07
intestine, neonate N06.CNhs11102.688-20B86.53
intestine, neonate N07.CNhs11095.720-20F28.56
intestine, neonate N10.CNhs11098.755-23A56.24
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E35.19
intestine, neonate N30.CNhs11131.1384-42G15.78
kidney, embryo E14.CNhs10606.411-4I94.74
kidney, embryo E15.CNhs10997.434-16F84.11
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I23.87
kidney, embryo E18.CNhs11001.1288-20C73.10
kidney, neonate N00.CNhs11214.646-21G76.59
kidney, neonate N10.CNhs11206.758-6D55.19
kidney, neonate N20.CNhs11113.832-19I14.72
kidney, neonate N25.CNhs11122.1353-25F32.67
kidney, neonate N30.CNhs11203.1385-42H14.07
liver, adult pregnant day01.CNhs10466.508-5B22.67
liver, embryo E12.CNhs10601.355-15F89.34
liver, embryo E13.CNhs10524.378-3H611.60
liver, embryo E14.CNhs10594.409-16E110.34
liver, embryo E15.CNhs10520.433-16D720.49
liver, embryo E16.CNhs10523.462-17F515.68
liver, embryo E17.CNhs10510.481-18A39.17
liver, embryo E18.CNhs10579.499-43G413.23
liver, neonate N00.CNhs11117.641-24F420.27
liver, neonate N03.CNhs11123.1345-25G25.49
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H28.19
liver, neonate N10.CNhs11115.751-24B94.99
liver, neonate N20.CNhs11220.823-25A34.80
liver, neonate N25.CNhs11198.1368-26H13.95
liver, neonate N30.CNhs11106.1382-42D15.79
lung, adult.CNhs10474.28-22B111.09
lung, embryo E12.CNhs10522.354-16G23.41
lung, embryo E14.CNhs10604.404-26F83.91
lung, embryo E15.CNhs11020.432-17C53.73
lung, embryo E16.CNhs10998.458-17B63.99
lung, embryo E17.CNhs10605.480-44A66.20
lung, embryo E18.CNhs10583.1287-20I66.67
lung, neonate N00.CNhs11224.640-42C69.76
lung, neonate N06.CNhs11212.683-20E56.78
lung, neonate N07.CNhs11111.715-19A39.97
lung, neonate N10.CNhs11219.750-23E67.81
lung, neonate N20.CNhs11109.822-18A48.68
lung, neonate N25.CNhs11119.1359-25C77.60
lung, neonate N30.CNhs11133.1394-42H27.52
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H24.97
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A31.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.41
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.54
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.39
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.93
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I75.11
ovary, embryo E18.CNhs11040.505-44H73.74
ovary, neonate N00.CNhs11217.1299-22I48.63
oviduct, adult pregnant day01.CNhs10500.988-6G67.92
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E53.96
pancreas, embryo E17.CNhs10599.1558-45G34.43
pancreas, embryo E18.CNhs10580.1535-43I77.07
pancreas, neonate N00.CNhs11105.645-26G97.75
pancreas, neonate N01.CNhs11138.1531-43D74.73
pancreas, neonate N02.CNhs11139.1539-43D87.84
pancreas, neonate N16.CNhs11136.787-43B64.74
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E63.06
pituitary gland, embryo E13.CNhs11009.370-44C72.20
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B93.72
pituitary gland, embryo E16.CNhs11036.449-43F63.92
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E95.48
placenta, adult pregnant day10.CNhs10472.539-13I73.75
placenta, adult pregnant day17.CNhs10464.577-18G35.51
prostate, adult.CNhs10470.859-1F82.87
skin, adult.CNhs10492.30-1C312.04
skin, neonate N00.CNhs11124.650-25G47.75
skin, neonate N03.CNhs11215.662-22H36.69
skin, neonate N06.CNhs11097.693-20I53.22
skin, neonate N10.CNhs11108.762-6C44.27
small intestine, neonate N16.CNhs11114.790-21I15.54
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G214.87
spleen, embryo E16.CNhs11035.461-43C15.57
spleen, embryo E18.CNhs11011.1271-21F27.59
spleen, neonate N10.CNhs11116.752-24D116.95
spleen, neonate N20.CNhs11112.824-19H119.14
spleen, neonate N25.CNhs11099.1354-25G318.07
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.76
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.91
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E34.43
stomach, embryo E15.CNhs10603.1252-16G85.90
stomach, embryo E16.CNhs11022.459-17D43.46
stomach, embryo E17.CNhs11006.1035-18D53.76
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B85.80
stomach, neonate N07.CNhs11210.718-18A98.35
stomach, neonate N25.CNhs11104.1355-25E44.45
stomach, neonate N30.CNhs11134.1386-42I18.68
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F55.23
testis, embryo E15.CNhs11034.443-27C52.81
testis, embryo E16.CNhs11033.470-26G54.47
testis, embryo E17.CNhs11029.486-18I52.07
testis, embryo E18.CNhs11027.503-18G51.86
testis, neonate N00.CNhs11189.1300-22B75.87
testis, neonate N07.CNhs11222.726-26I42.47
testis, neonate N10.CNhs11204.763-44D91.57
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B512.32
thymus, embryo E14.CNhs11041.402-44I43.45
thymus, embryo E15.CNhs11005.430-45I24.72
thymus, embryo E16.CNhs11002.456-26C54.42
thymus, embryo E17.CNhs10581.478-18C18.24
thymus, embryo E18.CNhs10595.1273-19G46.95
thymus, neonate N02.CNhs11181.1541-43F87.81
thymus, neonate N03.CNhs11137.2104-43C710.49
thymus, neonate N06.CNhs11197.681-26C410.20
thymus, neonate N07.CNhs11211.713-19D310.67
thymus, neonate N10.CNhs11194.748-24E49.98
thymus, neonate N20.CNhs11186.820-7A210.82
thymus, neonate N25.CNhs11125.1362-25G78.08
thymus, neonate N30.CNhs11132.1393-42G29.82
tongue, adult.CNhs10499.32-1B44.08
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.53
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.69
urinary bladder, adult.CNhs10481.879-12E410.24
uterus, adult pregnant day19.CNhs10497.590-15F58.63
uterus, adult.CNhs10509.92-27E56.41
vagina, adult.CNhs10502.89-27D57.29
vesicular gland, adult.CNhs10491.51-27F86.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I84.05
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H23.41
whole body, embryo E14.5.CNhs10578.420-27D28.27
whole body, embryo E14.CNhs10519.395-14B14.40
whole body, embryo E16.CNhs10514.453-14F24.78
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.42
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.34
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.99
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.96
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.73
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.92
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.71
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.99
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.75
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.65
whole body, embryo E17.5.CNhs10513.490-9F95.40
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C27.31
whole body, neonate N01.CNhs10576.659-23C68.03
whole body, neonate N06.CNhs10515.692-21D15.51
whole body, neonate N10.CNhs10518.761-6B44.41





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
subdivision of digestive tract5.06e-15114
endoderm-derived structure1.05e-14118
endoderm1.05e-14118
presumptive endoderm1.05e-14118
digestive system1.07e-14116
digestive tract1.07e-14116
primitive gut1.07e-14116
foregut1.64e-1080
endo-epithelium1.42e-0969
trunk1.27e-0890
unilaminar epithelium6.53e-0866
gut epithelium2.34e-0755
trunk region element3.63e-0779
subdivision of trunk9.03e-0766







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