FFCP PHASE1:Hg19::chr9:131446139..131446175,+: Difference between revisions
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{{FFCP | 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1273793591026,2.24397944612263|short_description=p7@SET}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6418 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10760 | |||
|TSSclassifier=W | |||
|UniProt=Q01105,Q5VXV3 | |||
|association_with_transcript=205bp_to_ENST00000372692,NM_001122821,uc004bvt.3_5end | |||
|coexpression_cluster_id=C583 | |||
|description=CAGE_peak_7_at_SET_5end | |||
|id=chr9:131446139..131446175,+ | |||
|ontology_enrichment_celltype=CL:0000037!8.74e-36!172;CL:0000566!8.74e-36!172;CL:0002032!3.30e-34!165;CL:0000837!3.30e-34!165;CL:0000763!4.74e-34!112;CL:0000049!4.74e-34!112;CL:0000557!2.47e-33!71;CL:0000738!6.08e-33!140;CL:0000988!6.47e-33!182;CL:0000839!2.86e-32!70;CL:0002009!1.26e-31!65;CL:0000766!5.31e-31!76;CL:0002031!2.02e-30!124;CL:0002194!2.45e-30!63;CL:0000576!2.45e-30!63;CL:0000040!2.45e-30!63;CL:0000559!2.45e-30!63;CL:0002087!4.91e-28!119;CL:0000860!1.70e-27!45;CL:0002057!3.76e-26!42;CL:0000451!8.32e-07!10;CL:0000945!9.99e-07!24;CL:0000826!9.99e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.37e-24;33!CL:0002057;1.37e-24;33!CL:0000473;1.82e-23;39!CL:0000234;1.82e-23;39!CL:0000576;1.23e-21;48!CL:0000766;5.98e-17;69!CL:0000763;3.59e-13;100!CL:0002087;1.24e-09;104!CL:0000738;1.50e-09;136!CL:0000451;7.60e-08;10!CL:0000988;1.30e-07;177!CL:0000990;9.17e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.63e-44,168;CL:0000763,9.10e-44,108;CL:0000049,9.10e-44,108;CL:0002032,2.93e-42,161;CL:0000837,2.93e-42,161;CL:0000988,1.69e-41,177;CL:0000557,7.93e-40,67;CL:0000738,4.56e-38,136;CL:0000839,4.89e-38,66;CL:0002009,3.07e-37,61;CL:0000766,3.16e-37,72;CL:0002194,1.20e-35,59;CL:0000576,1.20e-35,59;CL:0000040,1.20e-35,59;CL:0000559,1.20e-35,59;CL:0000473,4.01e-35,48;CL:0000234,4.01e-35,48;CL:0002031,1.73e-34,120;CL:0000860,1.37e-31,42;CL:0002057,1.37e-31,42;CL:0002087,4.46e-31,115;CL:0000134,4.29e-09,354;CL:0002320,2.45e-08,361;CL:0000451,4.54e-08,10;CL:0000219,1.90e-07,386;CL:0000990,5.75e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.23e-23;42!CL:0000049;2.10e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.06e-08,51;DOID:0060083,1.06e-08,51;DOID:1240,1.22e-07,39;DOID:8692,4.78e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.41e-27!80;UBERON:0002390!2.29e-26!102;UBERON:0003061!2.29e-26!102;UBERON:0001474!7.64e-26!86;UBERON:0002193!2.29e-25!112;UBERON:0004765!3.20e-22!101;UBERON:0001434!3.20e-22!101;UBERON:0002405!1.84e-17!115;UBERON:0002204!1.66e-08!167;UBERON:0003081!2.34e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.04e-33,76;UBERON:0002405,1.45e-32,93;UBERON:0002193,1.00e-30,108;UBERON:0002390,1.53e-30,98;UBERON:0003061,1.53e-30,98;UBERON:0001474,6.28e-30,82;UBERON:0004765,1.41e-27,90;UBERON:0001434,7.87e-23,100;UBERON:0003081,2.52e-10,203;UBERON:0002204,6.50e-09,167;UBERON:0002384,6.85e-08,371 | |||
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| |||
|short_description=p7@SET | |||
}} |
Revision as of 07:42, 14 September 2013
Short description: | p7@SET |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_SET_5end |
Coexpression cluster: | C583_CD14_Monocytederived_Basophils_CD14CD16_immature_Mast_CD34 |
Association with transcript: | 205bp_to_ENST00000372692, NM_001122821, uc004bvt.3_5end |
EntrezGene: | SET |
HGNC: | 10760 |
UniProt: | Q01105Q5VXV3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 4.63e-44 | 168 |
myeloid cell | 9.10e-44 | 108 |
common myeloid progenitor | 9.10e-44 | 108 |
hematopoietic oligopotent progenitor cell | 2.93e-42 | 161 |
hematopoietic multipotent progenitor cell | 2.93e-42 | 161 |
hematopoietic cell | 1.69e-41 | 177 |
granulocyte monocyte progenitor cell | 7.93e-40 | 67 |
leukocyte | 4.56e-38 | 136 |
myeloid lineage restricted progenitor cell | 4.89e-38 | 66 |
macrophage dendritic cell progenitor | 3.07e-37 | 61 |
myeloid leukocyte | 3.16e-37 | 72 |
monopoietic cell | 1.20e-35 | 59 |
monocyte | 1.20e-35 | 59 |
monoblast | 1.20e-35 | 59 |
promonocyte | 1.20e-35 | 59 |
defensive cell | 4.01e-35 | 48 |
phagocyte | 4.01e-35 | 48 |
hematopoietic lineage restricted progenitor cell | 1.73e-34 | 120 |
classical monocyte | 1.37e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.37e-31 | 42 |
nongranular leukocyte | 4.46e-31 | 115 |
mesenchymal cell | 4.29e-09 | 354 |
connective tissue cell | 2.45e-08 | 361 |
dendritic cell | 4.54e-08 | 10 |
motile cell | 1.90e-07 | 386 |
conventional dendritic cell | 5.75e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.04e-33 | 76 |
immune system | 1.45e-32 | 93 |
hemolymphoid system | 1.00e-30 | 108 |
hematopoietic system | 1.53e-30 | 98 |
blood island | 1.53e-30 | 98 |
bone element | 6.28e-30 | 82 |
skeletal element | 1.41e-27 | 90 |
skeletal system | 7.87e-23 | 100 |
lateral plate mesoderm | 2.52e-10 | 203 |
musculoskeletal system | 6.50e-09 | 167 |
connective tissue | 6.85e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.06e-08 | 51 |
immune system cancer | 1.06e-08 | 51 |
leukemia | 1.22e-07 | 39 |
myeloid leukemia | 4.78e-07 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.