FFCP PHASE1:Hg19::chr9:130605421..130605442,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C962|description=CAGE_peak_at_chr9:130605421..130605442,-|id=chr9:130605421..130605442,-|ontology_enrichment_celltype=CL:0000115!3.62e-15!35;CL:0000057!3.07e-14!75;CL:0002139!1.83e-13!24;CL:0000048!5.74e-13!430;CL:0000222!7.75e-13!119;CL:0000055!8.58e-13!180;CL:0002078!1.29e-12!44;CL:0000723!7.59e-12!436;CL:0000034!6.91e-11!444;CL:0000071!5.47e-10!18;CL:0002546!5.47e-10!18;CL:0000213!1.23e-08!57;CL:0000215!1.23e-08!57;CL:0002371!2.64e-08!591;CL:0002334!3.68e-08!12;CL:0002320!4.02e-08!365;CL:1000413!3.13e-07!9;CL:0000134!4.00e-07!358|ontology_enrichment_celltype_v019=CL:0002139;1.38e-20;24!CL:0000115;2.14e-19;36!CL:0000071;1.09e-14;18!CL:0002078;2.18e-13;45!CL:1000413;6.94e-12;9!CL:0002334;5.35e-11;12!CL:0000213;6.85e-10;58!CL:0000215;6.85e-10;58!CL:0000473;9.66e-09;39!CL:0000234;9.66e-09;39!CL:0002544;8.25e-08;6!CL:0002138;1.51e-07;6|ontology_enrichment_celltype_v019_2=CL:0000115,9.80e-23,36;CL:0002139,1.30e-21,24;CL:0002078,1.88e-19,45;CL:0000213,2.26e-16,58;CL:0000215,2.26e-16,58;CL:0000071,3.48e-15,18;CL:0002546,3.48e-15,18;CL:0000222,6.87e-15,121;CL:1000413,3.51e-12,9;CL:0002334,8.30e-11,12;CL:0000048,1.39e-10,427;CL:0000057,2.12e-10,76;CL:0000723,4.71e-10,433;CL:0000034,2.25e-09,441;CL:0005020,3.99e-08,6;CL:0002138,3.99e-08,6;CL:0005022,3.99e-08,6;CL:0002544,4.15e-08,6;CL:0000473,3.99e-07,48;CL:0000234,3.99e-07,48|ontology_enrichment_development_v019=CL:0002546;1.09e-14;18!CL:0005022;1.51e-07;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000055!8.13e-19!69;UBERON:0004872!3.28e-18!84;UBERON:0002049!8.57e-16!79;UBERON:0007798!8.57e-16!79;UBERON:0001981!2.69e-15!60;UBERON:0007500!2.69e-15!60;UBERON:0004537!2.69e-15!60;UBERON:0006965!2.69e-15!60;UBERON:0001009!1.57e-14!113;UBERON:0003081!2.14e-14!216;UBERON:0004535!1.45e-13!110;UBERON:0001637!4.42e-12!42;UBERON:0003509!4.42e-12!42;UBERON:0004572!4.42e-12!42;UBERON:0001986!5.47e-10!18;UBERON:0004638!5.47e-10!18;UBERON:0004852!5.47e-10!18;UBERON:0003914!7.77e-10!118;UBERON:0004573!1.02e-09!33;UBERON:0004571!1.02e-09!33;UBERON:0006914!5.11e-09!25;UBERON:0000926!8.11e-09!448;UBERON:0004120!8.11e-09!448;UBERON:0006603!8.11e-09!448;UBERON:0002204!1.02e-08!167;UBERON:0000487!1.16e-08!22;UBERON:0002384!4.86e-08!375;UBERON:0003915!3.13e-07!9;UBERON:0004700!3.13e-07!9;UBERON:0001917!3.13e-07!9;UBERON:0004290!3.92e-07!70;UBERON:0000468!7.05e-07!659;UBERON:0007100!7.10e-07!27|ontology_enrichment_uberon_v019=UBERON:0004638;1.09e-14;18!UBERON:0001986;1.09e-14;18!UBERON:0004852;1.09e-14;18!UBERON:0006914;4.19e-14;25!UBERON:0000487;4.64e-13;22!UBERON:0003915;6.94e-12;9!UBERON:0004700;6.94e-12;9!UBERON:0001917;6.94e-12;9!UBERON:0000055;3.89e-11;65!UBERON:0004457;3.89e-10;9!UBERON:0000042;3.89e-10;9!UBERON:0003688;1.01e-09;6!UBERON:0002358;1.01e-09;6!UBERON:0003684;1.01e-09;6!UBERON:0001178;1.01e-09;6!UBERON:0007500;1.53e-09;56!UBERON:0001981;1.53e-09;56!UBERON:0004537;1.53e-09;56!UBERON:0001637;1.78e-09;42!UBERON:0003509;1.78e-09;42!UBERON:0004572;1.78e-09;42!UBERON:0000490;7.55e-09;33!UBERON:0001473;1.16e-07;8!UBERON:0004536;1.16e-07;8!UBERON:0006558;1.16e-07;8!UBERON:0004573;1.49e-07;33!UBERON:0004571;1.49e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.78e-19,68;UBERON:0004872,3.03e-18,83;UBERON:0002049,2.65e-16,78;UBERON:0007798,2.65e-16,78;UBERON:0000926,6.46e-16,315;UBERON:0004120,6.46e-16,315;UBERON:0006603,6.46e-16,315;UBERON:0003081,2.94e-15,203;UBERON:0004638,3.48e-15,18;UBERON:0001986,3.48e-15,18;UBERON:0004852,3.48e-15,18;UBERON:0001009,3.56e-15,112;UBERON:0006914,1.04e-14,25;UBERON:0007500,1.78e-14,59;UBERON:0001981,1.78e-14,59;UBERON:0004537,1.78e-14,59;UBERON:0006965,1.78e-14,59;UBERON:0004535,2.19e-14,109;UBERON:0000487,1.81e-13,22;UBERON:0003915,3.51e-12,9;UBERON:0004700,3.51e-12,9;UBERON:0001917,3.51e-12,9;UBERON:0001637,1.97e-10,42;UBERON:0003509,1.97e-10,42;UBERON:0004572,1.97e-10,42;UBERON:0003914,1.08e-09,117;UBERON:0003688,1.56e-09,6;UBERON:0002358,1.56e-09,6;UBERON:0003684,1.56e-09,6;UBERON:0001178,1.56e-09,6;UBERON:0004457,1.09e-08,12;UBERON:0000042,1.09e-08,12;UBERON:0004573,2.88e-08,33;UBERON:0004571,2.88e-08,33;UBERON:0001473,3.63e-08,8;UBERON:0004536,3.63e-08,8;UBERON:0006558,3.63e-08,8|phase1_expression=6.90377841228115,4.71021152560163,5.3562673556469,5.00366491765652,3.12872766099101,6.10636966870258,0,0.631719873426831,0.261185628199839,0.245733936501509,0.697801167972428,0,0.263766978228454,0.37129905888014,0.331397375727916,0.672325146451775,0.602694528023977,0,0.487932798790507,0.123121058076788,0.408001382488506,0,0,0.136874425072884,0.502170558379211,0.0764134057479513,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0.553995408531877,0,0,0.223915474239924,0,0.77272670290256,2.76256653681173,2.26725566213286,0.727752183563449,2.324290369056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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C962 | |||
|description=CAGE_peak_at_chr9:130605421..130605442,- | |||
|id=chr9:130605421..130605442,- | |||
|ontology_enrichment_celltype=CL:0000115!3.62e-15!35;CL:0000057!3.07e-14!75;CL:0002139!1.83e-13!24;CL:0000048!5.74e-13!430;CL:0000222!7.75e-13!119;CL:0000055!8.58e-13!180;CL:0002078!1.29e-12!44;CL:0000723!7.59e-12!436;CL:0000034!6.91e-11!444;CL:0000071!5.47e-10!18;CL:0002546!5.47e-10!18;CL:0000213!1.23e-08!57;CL:0000215!1.23e-08!57;CL:0002371!2.64e-08!591;CL:0002334!3.68e-08!12;CL:0002320!4.02e-08!365;CL:1000413!3.13e-07!9;CL:0000134!4.00e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.38e-20;24!CL:0000115;2.14e-19;36!CL:0000071;1.09e-14;18!CL:0002078;2.18e-13;45!CL:1000413;6.94e-12;9!CL:0002334;5.35e-11;12!CL:0000213;6.85e-10;58!CL:0000215;6.85e-10;58!CL:0000473;9.66e-09;39!CL:0000234;9.66e-09;39!CL:0002544;8.25e-08;6!CL:0002138;1.51e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,9.80e-23,36;CL:0002139,1.30e-21,24;CL:0002078,1.88e-19,45;CL:0000213,2.26e-16,58;CL:0000215,2.26e-16,58;CL:0000071,3.48e-15,18;CL:0002546,3.48e-15,18;CL:0000222,6.87e-15,121;CL:1000413,3.51e-12,9;CL:0002334,8.30e-11,12;CL:0000048,1.39e-10,427;CL:0000057,2.12e-10,76;CL:0000723,4.71e-10,433;CL:0000034,2.25e-09,441;CL:0005020,3.99e-08,6;CL:0002138,3.99e-08,6;CL:0005022,3.99e-08,6;CL:0002544,4.15e-08,6;CL:0000473,3.99e-07,48;CL:0000234,3.99e-07,48 | |||
|ontology_enrichment_development_v019=CL:0002546;1.09e-14;18!CL:0005022;1.51e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!8.13e-19!69;UBERON:0004872!3.28e-18!84;UBERON:0002049!8.57e-16!79;UBERON:0007798!8.57e-16!79;UBERON:0001981!2.69e-15!60;UBERON:0007500!2.69e-15!60;UBERON:0004537!2.69e-15!60;UBERON:0006965!2.69e-15!60;UBERON:0001009!1.57e-14!113;UBERON:0003081!2.14e-14!216;UBERON:0004535!1.45e-13!110;UBERON:0001637!4.42e-12!42;UBERON:0003509!4.42e-12!42;UBERON:0004572!4.42e-12!42;UBERON:0001986!5.47e-10!18;UBERON:0004638!5.47e-10!18;UBERON:0004852!5.47e-10!18;UBERON:0003914!7.77e-10!118;UBERON:0004573!1.02e-09!33;UBERON:0004571!1.02e-09!33;UBERON:0006914!5.11e-09!25;UBERON:0000926!8.11e-09!448;UBERON:0004120!8.11e-09!448;UBERON:0006603!8.11e-09!448;UBERON:0002204!1.02e-08!167;UBERON:0000487!1.16e-08!22;UBERON:0002384!4.86e-08!375;UBERON:0003915!3.13e-07!9;UBERON:0004700!3.13e-07!9;UBERON:0001917!3.13e-07!9;UBERON:0004290!3.92e-07!70;UBERON:0000468!7.05e-07!659;UBERON:0007100!7.10e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.09e-14;18!UBERON:0001986;1.09e-14;18!UBERON:0004852;1.09e-14;18!UBERON:0006914;4.19e-14;25!UBERON:0000487;4.64e-13;22!UBERON:0003915;6.94e-12;9!UBERON:0004700;6.94e-12;9!UBERON:0001917;6.94e-12;9!UBERON:0000055;3.89e-11;65!UBERON:0004457;3.89e-10;9!UBERON:0000042;3.89e-10;9!UBERON:0003688;1.01e-09;6!UBERON:0002358;1.01e-09;6!UBERON:0003684;1.01e-09;6!UBERON:0001178;1.01e-09;6!UBERON:0007500;1.53e-09;56!UBERON:0001981;1.53e-09;56!UBERON:0004537;1.53e-09;56!UBERON:0001637;1.78e-09;42!UBERON:0003509;1.78e-09;42!UBERON:0004572;1.78e-09;42!UBERON:0000490;7.55e-09;33!UBERON:0001473;1.16e-07;8!UBERON:0004536;1.16e-07;8!UBERON:0006558;1.16e-07;8!UBERON:0004573;1.49e-07;33!UBERON:0004571;1.49e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.78e-19,68;UBERON:0004872,3.03e-18,83;UBERON:0002049,2.65e-16,78;UBERON:0007798,2.65e-16,78;UBERON:0000926,6.46e-16,315;UBERON:0004120,6.46e-16,315;UBERON:0006603,6.46e-16,315;UBERON:0003081,2.94e-15,203;UBERON:0004638,3.48e-15,18;UBERON:0001986,3.48e-15,18;UBERON:0004852,3.48e-15,18;UBERON:0001009,3.56e-15,112;UBERON:0006914,1.04e-14,25;UBERON:0007500,1.78e-14,59;UBERON:0001981,1.78e-14,59;UBERON:0004537,1.78e-14,59;UBERON:0006965,1.78e-14,59;UBERON:0004535,2.19e-14,109;UBERON:0000487,1.81e-13,22;UBERON:0003915,3.51e-12,9;UBERON:0004700,3.51e-12,9;UBERON:0001917,3.51e-12,9;UBERON:0001637,1.97e-10,42;UBERON:0003509,1.97e-10,42;UBERON:0004572,1.97e-10,42;UBERON:0003914,1.08e-09,117;UBERON:0003688,1.56e-09,6;UBERON:0002358,1.56e-09,6;UBERON:0003684,1.56e-09,6;UBERON:0001178,1.56e-09,6;UBERON:0004457,1.09e-08,12;UBERON:0000042,1.09e-08,12;UBERON:0004573,2.88e-08,33;UBERON:0004571,2.88e-08,33;UBERON:0001473,3.63e-08,8;UBERON:0004536,3.63e-08,8;UBERON:0006558,3.63e-08,8 | |||
|phase1_expression=6.90377841228115,4.71021152560163,5.3562673556469,5.00366491765652,3.12872766099101,6.10636966870258,0,0.631719873426831,0.261185628199839,0.245733936501509,0.697801167972428,0,0.263766978228454,0.37129905888014,0.331397375727916,0.672325146451775,0.602694528023977,0,0.487932798790507,0.123121058076788,0.408001382488506,0,0,0.136874425072884,0.502170558379211,0.0764134057479513,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0.553995408531877,0,0,0.223915474239924,0,0.77272670290256,2.76256653681173,2.26725566213286,0.727752183563449,2.32429036905685,0.411167888021826,3.09706370895104,0.575384784644301,1.5369642391746,0.945928919554341,1.03423704220986,0,0,3.01187743268168,2.45615535052061,1.34834090667051,1.83650335422542,0.962787081228281,4.47535988059329,1.64925650093358,1.39624560335142,2.55734850319616,1.7412554317715,0,1.24564449799115,0.502497330513487,1.5644487552606,0.65156653411535,0.605399502633369,0,0.632924774881769,0,0.212604299965044,0,0.112328631146495,0,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,2.01210257911091,1.02290049474824,0.722878304769133,1.50401373190767,0.724232594804119,1.5905718941022,0.973269740605272,0,0,0,0.916853528483988,0,0,0,0.174129737299267,0.930705723632056,0,0,0,2.38514888840046,1.72046919021225,1.38856200643038,2.82653970962005,3.35599548967925,4.12677062910101,6.26984899610432,1.8089173141853,3.5576626268671,4.01664735317604,1.61131726843659,2.28081631715554,1.70843440283719,1.47065232138347,5.67099363517232,2.41109266367015,0.44905874525234,0.788280363383256,0,7.59412527654503,3.29763139074733,0,0,0,3.97577561356255,2.78587125662075,0.264818361626438,2.58152958673932,1.41867352879343,0,2.1349799145941,0.24666754841716,1.55605517699883,1.21239604862719,2.61539044981534,1.05950199351452,0,0.468642863667593,1.5608003841516,0,0.896692083310806,0.23486899728753,0.323745888736263,0.140450806702248,0.408308342509787,0.982674538494144,0.723280468230358,1.18800285728205,1.7308685049499,0.910161361938026,6.46756327634615,0.336672227908132,0.500474079487857,0,0,0.30648779579902,1.35214253015937,0.794025282120147,1.07633781413317,0.640672166455702,0.635795703478686,1.80054657650641,0.515262646192195,1.54584324027377,1.48893485065272,0.168776332241266,1.55899208257918,0.757301322732344,0.276149695926898,0.484938170456436,2.13005755509969,0.906768884048762,0.508681776931463,0,0,0,0,0.132529768321485,0,0,0,0,4.69348596989448,2.57296375277154,0,0.464367928031979,0,0,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0,0,0.392442930250692,0,5.16708818237254,2.80483547606892,0.4115740113314,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0.651616610620649,1.03993478527958,0,0,0,1.15493158208859,1.85194205030644,1.90254152234598,0,0,1.23108503043699,1.40402559083543,1.0404181360211,0,0,0,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0.126995788584338,0.763976851116555,0,0,0,0,0.285826432630578,0.448524337381443,2.1798003441664,1.3200891447771,0.517086863031111,3.57656445851882,1.690605505112,0.531876233169741,2.08014873822732,0.771622122786426,0,1.8649552531127,0.428933980974443,0.542621605391443,0,0.977208552881205,0,0,0,0,0.499864955910285,1.2162378064119,1.50677127429638,0,0.958499421966331,0,0,1.73737568001095,3.6985738059069,1.61154866915906,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,1.00034104211935,0.813795071099207,0.415941723061614,1.42743191037729,0.946214490203608,0,0.902838299183157,0,1.03473071292505,0,0.553107505625109,0.695068915744663,1.76221041716467,0.686286847621712,0,0,0,0,1.66435439510497,0,5.70647957983187,2.455391572609,8.13914273855913,11.4043842837574,2.04682899626681,3.05622450172854,5.93672265779964,0.616838775210622,1.06537035187876,0.739144404124282,1.55776328755086,2.20799719073923,0,0.200506470303285,0,0.803701137152247,0.364182336013434,0.786746489756545,0,0,0,0,0.105551628892876,9.09867072567173,5.27290486357199,1.29549549661284,12.3381802152231,0,0,0,0,0.223874754722178,0,0.261435451024901,0,0,0,0.721287081534056,0,0,0,0.650060246036521,3.21367859688319,1.16004861950546,1.3864375540318,0.614014698904518,0.275673144969061,0.107420244868274,0.435050081742686,0.511359764496605,0.0890320356467374,0,0,0,0,0,2.20368642781448,1.3940745403212,0.924100740528266,1.06461206063404,0,1.48259375283136,0.858749320451947,0,0.316379424718726,0.190630193923825,0.255897791311334,0,2.54562598340749,0,0,0.54907405947211,0.824686816419805,0.404364963146632,1.58510321173008,0.842516912477962,0,0.974853958525138,1.05650146756755,1.09199929126389,1.27264888758341,1.13008116620243,1.10273068709225,0.66343897524122,3.5076070820301,0.578775534266688,0,0.608731130888112,0.30982349809975,1.12678241012897,0,0,0,0,2.53329162357197,1.97576935775941,0,0.699869440489966,0,0,0,1.41215701165169,0,0,0,0,0.507447609232169,0.764637207142375,0,0,0.411362273086194,0,0,0,0,0,0.245040215981032,0,0,0,0,0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| |||
|short_description=p@chr9:130605421..130605442,- | |||
}} |
Revision as of 07:35, 14 September 2013
Short description: | p@chr9:130605421..130605442, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:130605421..130605442, - |
Coexpression cluster: | C962_Renal_Endothelial_Preadipocyte_Adipocyte_Hepatic_chorionic_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 9.80e-23 | 36 |
endothelial cell of vascular tree | 1.30e-21 | 24 |
meso-epithelial cell | 1.88e-19 | 45 |
lining cell | 2.26e-16 | 58 |
barrier cell | 2.26e-16 | 58 |
blood vessel endothelial cell | 3.48e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.48e-15 | 18 |
mesodermal cell | 6.87e-15 | 121 |
endothelial cell of artery | 3.51e-12 | 9 |
preadipocyte | 8.30e-11 | 12 |
multi fate stem cell | 1.39e-10 | 427 |
fibroblast | 2.12e-10 | 76 |
somatic stem cell | 4.71e-10 | 433 |
stem cell | 2.25e-09 | 441 |
lymphangioblast | 3.99e-08 | 6 |
endothelial cell of lymphatic vessel | 3.99e-08 | 6 |
vascular lymphangioblast | 3.99e-08 | 6 |
aortic endothelial cell | 4.15e-08 | 6 |
defensive cell | 3.99e-07 | 48 |
phagocyte | 3.99e-07 | 48 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.