FFCP PHASE1:Hg19::chr9:127025189..127025200,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=34bp_to_ENST00000437461_5end|coexpression_cluster_id=C1861|description=CAGE_peak_1_at_ENST00000437461_5end|id=chr9:127025189..127025200,+|ontology_enrichment_celltype=CL:0000128!2.71e-39!7;CL:0000126!2.71e-39!7;CL:0000127!2.71e-39!7;CL:0002453!2.71e-39!7;CL:0002319!4.68e-19!25;CL:0002605!3.13e-18!3;CL:0002586!5.52e-18!3;CL:0002603!2.50e-17!3;CL:0000243!1.19e-15!15;CL:0000125!1.19e-15!15;CL:0000030!1.19e-15!15;CL:0000339!1.19e-15!15;CL:0000095!6.64e-14!17;CL:0000123!6.64e-14!17;CL:0000149!1.29e-13!4;CL:0000133!9.19e-11!59;CL:0000221!1.32e-08!71;CL:0000333!2.92e-07!41|ontology_enrichment_celltype_v019=CL:0002605;1.31e-98;3!CL:0000128;1.97e-75;7!CL:0000126;1.97e-75;7!CL:0000127;1.97e-75;7!CL:0002586;2.66e-44;3!CL:0000149;1.50e-33;4!CL:0000243;1.38e-31;15!CL:0000125;1.38e-31;15!CL:0000095;2.40e-28;17!CL:0002319;3.62e-20;25!CL:0000147;2.24e-10;14|ontology_enrichment_celltype_v019_2=CL:0002605,1.11e-98,3;CL:0000128,1.79e-75,7;CL:0000126,1.79e-75,7;CL:0000127,1.79e-75,7;CL:0002453,1.79e-75,7;CL:0002586,2.97e-44,3;CL:0000149,1.63e-33,4;CL:0000243,1.33e-31,15;CL:0000125,1.33e-31,15;CL:0000030,1.33e-31,15;CL:0000339,1.33e-31,15;CL:0000095,2.32e-28,17;CL:0000123,2.32e-28,17;CL:0002319,3.53e-20,25;CL:0000333,6.51e-13,41;CL:0000147,2.29e-10,14;CL:0000133,2.88e-09,59;CL:0000221,9.99e-08,72|ontology_enrichment_development_v019=CL:0000339;1.38e-31;15!CL:0000133;2.54e-09;59!CL:0000221;5.46e-07;72|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000966!3.47e-18!5;UBERON:0005388!3.47e-18!5;UBERON:0001802!3.47e-18!5;UBERON:0001781!5.52e-18!3;UBERON:0001782!5.52e-18!3;UBERON:0005424!5.52e-18!3;UBERON:0005743!1.37e-14!86;UBERON:0003075!1.38e-14!86;UBERON:0007284!1.38e-14!86;UBERON:0002346!8.77e-14!90;UBERON:0000019!2.96e-13!19;UBERON:0000047!2.96e-13!19;UBERON:0004088!2.96e-13!19;UBERON:0003072!2.96e-13!19;UBERON:0003071!2.96e-13!19;UBERON:0004128!2.96e-13!19;UBERON:0000073!6.80e-13!94;UBERON:0001016!6.80e-13!94;UBERON:0000970!1.51e-12!20;UBERON:0007625!2.01e-12!11;UBERON:0002104!6.58e-12!21;UBERON:0001456!6.58e-12!21;UBERON:0000153!4.77e-11!129;UBERON:0007811!4.77e-11!129;UBERON:0000020!8.55e-11!23;UBERON:0003056!1.94e-10!61;UBERON:0000033!2.15e-10!123;UBERON:0001032!2.62e-10!24;UBERON:0004456!2.62e-10!24;UBERON:0004121!1.47e-09!169;UBERON:0000924!3.06e-09!173;UBERON:0006601!3.06e-09!173;UBERON:0002037!6.56e-09!6;UBERON:0006215!6.56e-09!6;UBERON:0001017!1.49e-08!82;UBERON:0005085!2.24e-08!29;UBERON:0000063!3.47e-08!97;UBERON:0004733!1.32e-07!12;UBERON:0002028!1.32e-07!12;UBERON:0007277!1.32e-07!12;UBERON:0004732!5.05e-07!13|ontology_enrichment_uberon_v019=UBERON:0001781;2.66e-44;3!UBERON:0001782;2.66e-44;3!UBERON:0000966;4.34e-27;5!UBERON:0005388;4.34e-27;5!UBERON:0001802;4.34e-27;5!UBERON:0007625;6.30e-13;11!UBERON:0000956;3.31e-12;25!UBERON:0000203;3.31e-12;25!UBERON:0002791;3.77e-10;32!UBERON:0001869;3.77e-10;32!UBERON:0003528;1.28e-09;34!UBERON:0002020;1.28e-09;34!UBERON:0001893;1.28e-09;34!UBERON:0000019;6.70e-08;19!UBERON:0000047;6.70e-08;19!UBERON:0004088;6.70e-08;19!UBERON:0010230;6.70e-08;19!UBERON:0000970;1.50e-07;20!UBERON:0002104;3.10e-07;21!UBERON:0001456;3.10e-07;21|ontology_enrichment_uberon_v019_2=UBERON:0001782,2.97e-44,3;UBERON:0005424,2.97e-44,3;UBERON:0001781,1.63e-33,4;UBERON:0000966,9.46e-23,6;UBERON:0005388,9.46e-23,6;UBERON:0001802,9.46e-23,6;UBERON:0003056,9.68e-14,61;UBERON:0007625,6.49e-13,11;UBERON:0000956,3.25e-12,25;UBERON:0000203,3.25e-12,25;UBERON:0003075,2.22e-10,82;UBERON:0007284,2.22e-10,82;UBERON:0002346,6.36e-10,86;UBERON:0002791,8.77e-10,32;UBERON:0001869,8.77e-10,32;UBERON:0003528,2.89e-09,34;UBERON:0002020,2.89e-09,34;UBERON:0001893,2.89e-09,34;UBERON:0010371,2.74e-08,104;UBERON:0000955,3.85e-08,68;UBERON:0006238,3.85e-08,68;UBERON:0002780,7.76e-08,41;UBERON:0001890,7.76e-08,41;UBERON:0003080,7.76e-08,41;UBERON:0006240,7.76e-08,41;UBERON:0000019,1.52e-07,20;UBERON:0000047,1.52e-07,20;UBERON:0010312,1.52e-07,20;UBERON:0004088,1.52e-07,20;UBERON:0010230,1.52e-07,20;UBERON:0003072,1.52e-07,20;UBERON:0004128,1.52e-07,20;UBERON:0003071,1.52e-07,20;UBERON:0000970,3.14e-07,21;UBERON:0002104,3.14e-07,21;UBERON:0004121,3.21e-07,171;UBERON:0000924,3.21e-07,171;UBERON:0006601,3.21e-07,171;UBERON:0001456,6.09e-07,22;UBERON:0001017,6.13e-07,81|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492484232307152,0.204000691244253,0.626909442956176,2.86235987131057,3.28498620174922,5.27279086298172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0.348259474598534,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=34bp_to_ENST00000437461_5end | |||
|coexpression_cluster_id=C1861 | |||
|description=CAGE_peak_1_at_ENST00000437461_5end | |||
|id=chr9:127025189..127025200,+ | |||
|ontology_enrichment_celltype=CL:0000128!2.71e-39!7;CL:0000126!2.71e-39!7;CL:0000127!2.71e-39!7;CL:0002453!2.71e-39!7;CL:0002319!4.68e-19!25;CL:0002605!3.13e-18!3;CL:0002586!5.52e-18!3;CL:0002603!2.50e-17!3;CL:0000243!1.19e-15!15;CL:0000125!1.19e-15!15;CL:0000030!1.19e-15!15;CL:0000339!1.19e-15!15;CL:0000095!6.64e-14!17;CL:0000123!6.64e-14!17;CL:0000149!1.29e-13!4;CL:0000133!9.19e-11!59;CL:0000221!1.32e-08!71;CL:0000333!2.92e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0002605;1.31e-98;3!CL:0000128;1.97e-75;7!CL:0000126;1.97e-75;7!CL:0000127;1.97e-75;7!CL:0002586;2.66e-44;3!CL:0000149;1.50e-33;4!CL:0000243;1.38e-31;15!CL:0000125;1.38e-31;15!CL:0000095;2.40e-28;17!CL:0002319;3.62e-20;25!CL:0000147;2.24e-10;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.11e-98,3;CL:0000128,1.79e-75,7;CL:0000126,1.79e-75,7;CL:0000127,1.79e-75,7;CL:0002453,1.79e-75,7;CL:0002586,2.97e-44,3;CL:0000149,1.63e-33,4;CL:0000243,1.33e-31,15;CL:0000125,1.33e-31,15;CL:0000030,1.33e-31,15;CL:0000339,1.33e-31,15;CL:0000095,2.32e-28,17;CL:0000123,2.32e-28,17;CL:0002319,3.53e-20,25;CL:0000333,6.51e-13,41;CL:0000147,2.29e-10,14;CL:0000133,2.88e-09,59;CL:0000221,9.99e-08,72 | |||
|ontology_enrichment_development_v019=CL:0000339;1.38e-31;15!CL:0000133;2.54e-09;59!CL:0000221;5.46e-07;72 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000966!3.47e-18!5;UBERON:0005388!3.47e-18!5;UBERON:0001802!3.47e-18!5;UBERON:0001781!5.52e-18!3;UBERON:0001782!5.52e-18!3;UBERON:0005424!5.52e-18!3;UBERON:0005743!1.37e-14!86;UBERON:0003075!1.38e-14!86;UBERON:0007284!1.38e-14!86;UBERON:0002346!8.77e-14!90;UBERON:0000019!2.96e-13!19;UBERON:0000047!2.96e-13!19;UBERON:0004088!2.96e-13!19;UBERON:0003072!2.96e-13!19;UBERON:0003071!2.96e-13!19;UBERON:0004128!2.96e-13!19;UBERON:0000073!6.80e-13!94;UBERON:0001016!6.80e-13!94;UBERON:0000970!1.51e-12!20;UBERON:0007625!2.01e-12!11;UBERON:0002104!6.58e-12!21;UBERON:0001456!6.58e-12!21;UBERON:0000153!4.77e-11!129;UBERON:0007811!4.77e-11!129;UBERON:0000020!8.55e-11!23;UBERON:0003056!1.94e-10!61;UBERON:0000033!2.15e-10!123;UBERON:0001032!2.62e-10!24;UBERON:0004456!2.62e-10!24;UBERON:0004121!1.47e-09!169;UBERON:0000924!3.06e-09!173;UBERON:0006601!3.06e-09!173;UBERON:0002037!6.56e-09!6;UBERON:0006215!6.56e-09!6;UBERON:0001017!1.49e-08!82;UBERON:0005085!2.24e-08!29;UBERON:0000063!3.47e-08!97;UBERON:0004733!1.32e-07!12;UBERON:0002028!1.32e-07!12;UBERON:0007277!1.32e-07!12;UBERON:0004732!5.05e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001781;2.66e-44;3!UBERON:0001782;2.66e-44;3!UBERON:0000966;4.34e-27;5!UBERON:0005388;4.34e-27;5!UBERON:0001802;4.34e-27;5!UBERON:0007625;6.30e-13;11!UBERON:0000956;3.31e-12;25!UBERON:0000203;3.31e-12;25!UBERON:0002791;3.77e-10;32!UBERON:0001869;3.77e-10;32!UBERON:0003528;1.28e-09;34!UBERON:0002020;1.28e-09;34!UBERON:0001893;1.28e-09;34!UBERON:0000019;6.70e-08;19!UBERON:0000047;6.70e-08;19!UBERON:0004088;6.70e-08;19!UBERON:0010230;6.70e-08;19!UBERON:0000970;1.50e-07;20!UBERON:0002104;3.10e-07;21!UBERON:0001456;3.10e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,2.97e-44,3;UBERON:0005424,2.97e-44,3;UBERON:0001781,1.63e-33,4;UBERON:0000966,9.46e-23,6;UBERON:0005388,9.46e-23,6;UBERON:0001802,9.46e-23,6;UBERON:0003056,9.68e-14,61;UBERON:0007625,6.49e-13,11;UBERON:0000956,3.25e-12,25;UBERON:0000203,3.25e-12,25;UBERON:0003075,2.22e-10,82;UBERON:0007284,2.22e-10,82;UBERON:0002346,6.36e-10,86;UBERON:0002791,8.77e-10,32;UBERON:0001869,8.77e-10,32;UBERON:0003528,2.89e-09,34;UBERON:0002020,2.89e-09,34;UBERON:0001893,2.89e-09,34;UBERON:0010371,2.74e-08,104;UBERON:0000955,3.85e-08,68;UBERON:0006238,3.85e-08,68;UBERON:0002780,7.76e-08,41;UBERON:0001890,7.76e-08,41;UBERON:0003080,7.76e-08,41;UBERON:0006240,7.76e-08,41;UBERON:0000019,1.52e-07,20;UBERON:0000047,1.52e-07,20;UBERON:0010312,1.52e-07,20;UBERON:0004088,1.52e-07,20;UBERON:0010230,1.52e-07,20;UBERON:0003072,1.52e-07,20;UBERON:0004128,1.52e-07,20;UBERON:0003071,1.52e-07,20;UBERON:0000970,3.14e-07,21;UBERON:0002104,3.14e-07,21;UBERON:0004121,3.21e-07,171;UBERON:0000924,3.21e-07,171;UBERON:0006601,3.21e-07,171;UBERON:0001456,6.09e-07,22;UBERON:0001017,6.13e-07,81 | |||
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|short_description=p1@ENST00000437461 | |||
}} |
Revision as of 07:23, 14 September 2013
Short description: | p1@ENST00000437461 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000437461_5end |
Coexpression cluster: | C1861_astrocytoma_Astrocyte_Ciliary_adrenal_Neural_ductal_temporal |
Association with transcript: | 34bp_to_ENST00000437461_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.11e-98 | 3 |
oligodendrocyte | 1.79e-75 | 7 |
macroglial cell | 1.79e-75 | 7 |
astrocyte | 1.79e-75 | 7 |
oligodendrocyte precursor cell | 1.79e-75 | 7 |
retinal pigment epithelial cell | 2.97e-44 | 3 |
visual pigment cell | 1.63e-33 | 4 |
glial cell (sensu Vertebrata) | 1.33e-31 | 15 |
glial cell | 1.33e-31 | 15 |
glioblast | 1.33e-31 | 15 |
glioblast (sensu Vertebrata) | 1.33e-31 | 15 |
neuron associated cell | 2.32e-28 | 17 |
neuron associated cell (sensu Vertebrata) | 2.32e-28 | 17 |
neural cell | 3.53e-20 | 25 |
migratory neural crest cell | 6.51e-13 | 41 |
pigment cell | 2.29e-10 | 14 |
neurectodermal cell | 2.88e-09 | 59 |
ectodermal cell | 9.99e-08 | 72 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.