FFCP PHASE1:Hg19::chr9:113801505..113801517,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1902|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=3166|TSSclassifier=S|UniProt=|association_with_transcript=8bp_to_uc010mub.2_5end|description=CAGE_peak_36_at_LPAR1_5end|id=chr9:113801505..113801517,-|ontology_enrichment_celltype=CL:0002076!7.76e-15!43;CL:0002251!1.88e-10!21;CL:0000223!4.46e-09!59;CL:0000066!4.53e-07!254;CL:0002621!8.38e-07!3|ontology_enrichment_celltype_v019=CL:0002336;5.92e-26;1!CL:0002261;5.92e-26;1!CL:0002170;5.92e-26;1!CL:0002251;3.42e-20;20!CL:0002076;2.11e-15;42!CL:0000317;6.43e-14;2!CL:1000448;6.43e-14;2!CL:0002308;6.43e-14;2!CL:0002140;6.43e-14;2!CL:1000415;1.07e-13;2!CL:0002621;1.41e-09;3|ontology_enrichment_celltype_v019_2=CL:0002336,3.58e-26,1;CL:0002261,3.58e-26,1;CL:0002170,3.58e-26,1;CL:0002251,3.43e-20,20;CL:0002076,5.92e-15,42;CL:0000317,6.43e-14,2;CL:1000448,6.43e-14,2;CL:0002308,6.43e-14,2;CL:0002140,6.43e-14,2;CL:1000415,1.07e-13,2;CL:0000223,6.66e-11,58;CL:0002621,1.67e-09,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1749!3.36e-09!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!2.02e-16!169;UBERON:0000925!2.02e-16!169;UBERON:0006595!2.02e-16!169;UBERON:0000161!5.31e-14!35;UBERON:0001007!1.65e-13!155;UBERON:0001555!1.65e-13!155;UBERON:0007026!1.65e-13!155;UBERON:0000344!1.40e-10!12;UBERON:0000165!1.62e-10!28;UBERON:0000930!1.62e-10!28;UBERON:0003729!5.46e-10!5;UBERON:0000166!1.74e-09!21;UBERON:0003102!1.97e-09!95;UBERON:0001004!2.83e-09!72;UBERON:0003343!3.55e-08!4;UBERON:0004785!3.55e-08!4;UBERON:0000974!5.04e-08!10;UBERON:0005911!6.03e-08!82;UBERON:0004921!1.21e-07!129;UBERON:0004185!1.21e-07!129;UBERON:0000077!6.35e-07!130;UBERON:0001949!8.38e-07!3|ontology_enrichment_uberon_v019=UBERON:0003729;8.57e-18;13!UBERON:0002294;4.07e-15;7!UBERON:0001173;4.07e-15;7!UBERON:0002419;6.43e-14;2!UBERON:0007771;6.43e-14;2!UBERON:0003297;6.43e-14;2!UBERON:0001821;6.43e-14;2!UBERON:0003487;6.43e-14;2!UBERON:0001820;6.43e-14;2!UBERON:0006562;1.07e-13;2!UBERON:0000344;7.96e-12;20!UBERON:0002110;1.41e-09;3!UBERON:0001949;1.41e-09;3!UBERON:0000165;1.23e-08;28!UBERON:0003343;1.69e-07;4!UBERON:0002394;1.69e-07;4!UBERON:0004785;1.69e-07;4!UBERON:0003928;1.69e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0003729,7.22e-18,13;UBERON:0002419,6.43e-14,2;UBERON:0007771,6.43e-14,2;UBERON:0003297,6.43e-14,2;UBERON:0001821,6.43e-14,2;UBERON:0003487,6.43e-14,2;UBERON:0001820,6.43e-14,2;UBERON:0005089,6.43e-14,2;UBERON:0005088,6.43e-14,2;UBERON:0002294,5.22e-12,9;UBERON:0001173,5.22e-12,9;UBERON:0004912,5.22e-12,9;UBERON:0000344,7.13e-12,20;UBERON:0002110,1.41e-09,3;UBERON:0006242,1.41e-09,3;UBERON:0001949,1.67e-09,3;UBERON:0000165,2.16e-08,29;UBERON:0000930,2.16e-08,29;UBERON:0003343,1.40e-07,4;UBERON:0004785,1.40e-07,4;UBERON:0004119,1.63e-07,160;UBERON:0000925,1.63e-07,160;UBERON:0006595,1.63e-07,160|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0.168336113954066,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0.57978255948989,1.09098448236334,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0.100528972411631,1.75918045801206,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0.16798212819886,0.567100388969546,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0,0.241718899183244,0.40101294060657,0.276242966807689,0.114814448164607,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.206082023295445,0,0,2.29706215198469,0.650060246036521,0,0,0,0,0,0,0.145016693914229,0,0,0.661139661443912,0.192190067365106,1.27612712494584,0.50578890427775,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865999014529609,0,0,0,0,0,0.886860307073351,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0.622079175323615,1.52776196950456,0.537063524026827,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.455173793141999,0.254253650292766,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0.13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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1902 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3166 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=8bp_to_uc010mub.2_5end | |||
|description=CAGE_peak_36_at_LPAR1_5end | |||
|id=chr9:113801505..113801517,- | |||
|ontology_enrichment_celltype=CL:0002076!7.76e-15!43;CL:0002251!1.88e-10!21;CL:0000223!4.46e-09!59;CL:0000066!4.53e-07!254;CL:0002621!8.38e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002336;5.92e-26;1!CL:0002261;5.92e-26;1!CL:0002170;5.92e-26;1!CL:0002251;3.42e-20;20!CL:0002076;2.11e-15;42!CL:0000317;6.43e-14;2!CL:1000448;6.43e-14;2!CL:0002308;6.43e-14;2!CL:0002140;6.43e-14;2!CL:1000415;1.07e-13;2!CL:0002621;1.41e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002336,3.58e-26,1;CL:0002261,3.58e-26,1;CL:0002170,3.58e-26,1;CL:0002251,3.43e-20,20;CL:0002076,5.92e-15,42;CL:0000317,6.43e-14,2;CL:1000448,6.43e-14,2;CL:0002308,6.43e-14,2;CL:0002140,6.43e-14,2;CL:1000415,1.07e-13,2;CL:0000223,6.66e-11,58;CL:0002621,1.67e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!3.36e-09!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.02e-16!169;UBERON:0000925!2.02e-16!169;UBERON:0006595!2.02e-16!169;UBERON:0000161!5.31e-14!35;UBERON:0001007!1.65e-13!155;UBERON:0001555!1.65e-13!155;UBERON:0007026!1.65e-13!155;UBERON:0000344!1.40e-10!12;UBERON:0000165!1.62e-10!28;UBERON:0000930!1.62e-10!28;UBERON:0003729!5.46e-10!5;UBERON:0000166!1.74e-09!21;UBERON:0003102!1.97e-09!95;UBERON:0001004!2.83e-09!72;UBERON:0003343!3.55e-08!4;UBERON:0004785!3.55e-08!4;UBERON:0000974!5.04e-08!10;UBERON:0005911!6.03e-08!82;UBERON:0004921!1.21e-07!129;UBERON:0004185!1.21e-07!129;UBERON:0000077!6.35e-07!130;UBERON:0001949!8.38e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003729;8.57e-18;13!UBERON:0002294;4.07e-15;7!UBERON:0001173;4.07e-15;7!UBERON:0002419;6.43e-14;2!UBERON:0007771;6.43e-14;2!UBERON:0003297;6.43e-14;2!UBERON:0001821;6.43e-14;2!UBERON:0003487;6.43e-14;2!UBERON:0001820;6.43e-14;2!UBERON:0006562;1.07e-13;2!UBERON:0000344;7.96e-12;20!UBERON:0002110;1.41e-09;3!UBERON:0001949;1.41e-09;3!UBERON:0000165;1.23e-08;28!UBERON:0003343;1.69e-07;4!UBERON:0002394;1.69e-07;4!UBERON:0004785;1.69e-07;4!UBERON:0003928;1.69e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003729,7.22e-18,13;UBERON:0002419,6.43e-14,2;UBERON:0007771,6.43e-14,2;UBERON:0003297,6.43e-14,2;UBERON:0001821,6.43e-14,2;UBERON:0003487,6.43e-14,2;UBERON:0001820,6.43e-14,2;UBERON:0005089,6.43e-14,2;UBERON:0005088,6.43e-14,2;UBERON:0002294,5.22e-12,9;UBERON:0001173,5.22e-12,9;UBERON:0004912,5.22e-12,9;UBERON:0000344,7.13e-12,20;UBERON:0002110,1.41e-09,3;UBERON:0006242,1.41e-09,3;UBERON:0001949,1.67e-09,3;UBERON:0000165,2.16e-08,29;UBERON:0000930,2.16e-08,29;UBERON:0003343,1.40e-07,4;UBERON:0004785,1.40e-07,4;UBERON:0004119,1.63e-07,160;UBERON:0000925,1.63e-07,160;UBERON:0006595,1.63e-07,160 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0.168336113954066,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0.57978255948989,1.09098448236334,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0.100528972411631,1.75918045801206,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0.16798212819886,0.567100388969546,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0,0.241718899183244,0.40101294060657,0.276242966807689,0.114814448164607,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.206082023295445,0,0,2.29706215198469,0.650060246036521,0,0,0,0,0,0,0.145016693914229,0,0,0.661139661443912,0.192190067365106,1.27612712494584,0.50578890427775,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865999014529609,0,0,0,0,0,0.886860307073351,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0.622079175323615,1.52776196950456,0.537063524026827,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.455173793141999,0.254253650292766,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0.139423744278603,0.307801034015188,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.141353071433941,0,0,0.442287822516696,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,0.484945082442097,0,0.225980740780532,0,0,0,1.36885967914362,0,0,0.19980960958213,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0.104909176269996,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0.704815022316672,0.320362237703084,0.314408610199332,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.874862855734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0.449803112163605,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76872455576384,0,0,0,0.194860308839388,0.265729680626726,0,0,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,1.88751557356385,0.550285795565037,0.462102664601353,0,0,0,0.225630985047772,0,0.781514011233092,0,0,0.443568258651136,0,0,0,0,0,0,0,0,1.02209942111676,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0.121917924982269,0,0,0,0.485710993059139,0,0,0,0,0,0,0.771741581079447,0.218559560503957,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.103432995861895,0.426467963801962,0,0.129177819672012,0.248298857183432,0,0,0.202117188958219,0.217716747896961,0.342233301085281,0.134704106029175,0.430333232356058,0,0.407016343054873,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p36@LPAR1 | |||
}} |
Revision as of 06:57, 14 September 2013
Short description: | p36@LPAR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_36_at_LPAR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_uc010mub.2_5end |
EntrezGene: | LPAR1 |
HGNC: | 3166 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
buccal mucosa cell | 3.58e-26 | 1 |
endothelial cell of viscerocranial mucosa | 3.58e-26 | 1 |
keratinized cell of the oral mucosa | 3.58e-26 | 1 |
epithelial cell of alimentary canal | 3.43e-20 | 20 |
endo-epithelial cell | 5.92e-15 | 42 |
sebum secreting cell | 6.43e-14 | 2 |
epithelial cell of sweat gland | 6.43e-14 | 2 |
epithelial cell of skin gland | 6.43e-14 | 2 |
acinar cell of sebaceous gland | 6.43e-14 | 2 |
epithelial cell of gall bladder | 1.07e-13 | 2 |
endodermal cell | 6.66e-11 | 58 |
gingival epithelial cell | 1.67e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
mouth mucosa | 7.22e-18 | 13 |
skin gland | 6.43e-14 | 2 |
epidermis gland | 6.43e-14 | 2 |
gland of integumental system | 6.43e-14 | 2 |
sebaceous gland | 6.43e-14 | 2 |
skin sebaceous gland | 6.43e-14 | 2 |
sweat gland | 6.43e-14 | 2 |
sweat gland placode | 6.43e-14 | 2 |
sebaceous gland placode | 6.43e-14 | 2 |
biliary system | 5.22e-12 | 9 |
biliary tree | 5.22e-12 | 9 |
biliary bud | 5.22e-12 | 9 |
mucosa | 7.13e-12 | 20 |
gallbladder | 1.41e-09 | 3 |
gall bladder primordium | 1.41e-09 | 3 |
gingival epithelium | 1.67e-09 | 3 |
mouth | 2.16e-08 | 29 |
stomodeum | 2.16e-08 | 29 |
mucosa of oral region | 1.40e-07 | 4 |
respiratory system mucosa | 1.40e-07 | 4 |
endoderm-derived structure | 1.63e-07 | 160 |
endoderm | 1.63e-07 | 160 |
presumptive endoderm | 1.63e-07 | 160 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.