FFCP PHASE1:Mm9::chr5:139494354..139494365,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=313|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:139494354..139494365,-|id=chr5:139494354..139494365,-|ontology_enrichment_celltype=CL:0000117!5.76e-22!23;CL:0000337!5.76e-22!23;CL:0000540!5.32e-16!33;CL:0000047!5.32e-16!33;CL:0000031!5.32e-16!33;CL:0000404!5.32e-16!33;CL:0002319!2.89e-15!43;CL:0000221!1.01e-14!44;CL:0000133!1.01e-14!44;CL:0000393!2.17e-12!39;CL:0000211!2.17e-12!39;CL:0000055!6.10e-12!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.01e-31,23;CL:0000337,1.01e-31,23;CL:0000540,3.14e-21,33;CL:0000047,3.14e-21,33;CL:0000031,3.14e-21,33;CL:0000404,3.14e-21,33;CL:0000393,1.64e-17,39;CL:0000211,1.64e-17,39;CL:0002319,1.31e-15,43;CL:0000221,3.46e-15,44;CL:0000133,3.46e-15,44;CL:0002610,8.28e-12,3;CL:0002614,8.28e-12,3;CL:0002612,8.39e-11,3;CL:0002321,1.87e-08,70;CL:0002611,3.69e-08,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.87e-32!75;UBERON:0001016!2.87e-32!75;UBERON:0001017!2.89e-32!73;UBERON:0005743!2.89e-32!73;UBERON:0001049!8.64e-30!52;UBERON:0005068!8.64e-30!52;UBERON:0006241!8.64e-30!52;UBERON:0007135!8.64e-30!52;UBERON:0002020!2.81e-29!34;UBERON:0000955!1.89e-27!50;UBERON:0006238!1.89e-27!50;UBERON:0002616!1.47e-26!49;UBERON:0002346!2.50e-25!71;UBERON:0003075!2.50e-25!71;UBERON:0007284!2.50e-25!71;UBERON:0004121!1.21e-24!102;UBERON:0000924!1.21e-24!102;UBERON:0006601!1.21e-24!102;UBERON:0002791!4.72e-23!29;UBERON:0003528!4.72e-23!29;UBERON:0001893!4.72e-23!29;UBERON:0000033!1.40e-21!63;UBERON:0003080!1.68e-20!40;UBERON:0002780!1.54e-19!39;UBERON:0001890!1.54e-19!39;UBERON:0006240!1.54e-19!39;UBERON:0003056!2.94e-17!49;UBERON:0000956!2.46e-14!21;UBERON:0001869!2.46e-14!21;UBERON:0000203!2.46e-14!21;UBERON:0002619!1.31e-12!17;UBERON:0007811!1.47e-12!86;UBERON:0000153!1.63e-10!94;UBERON:0002021!1.98e-10!10;UBERON:0000411!1.98e-10!10;UBERON:0001950!1.98e-10!10;UBERON:0002420!3.38e-10!8;UBERON:0007245!3.38e-10!8;UBERON:0010009!3.38e-10!8;UBERON:0010011!3.38e-10!8;UBERON:0000454!3.38e-10!8;UBERON:0003076!8.85e-10!12;UBERON:0003057!8.85e-10!12;UBERON:0002240!1.80e-08!6;UBERON:0005174!1.80e-08!6;UBERON:0001137!1.80e-08!6;UBERON:0002298!3.31e-08!6;UBERON:0000025!1.26e-07!114;UBERON:0001948!1.58e-07!5;UBERON:0002315!1.58e-07!5;UBERON:0004111!6.15e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.10e-37,34;UBERON:0000073,1.52e-33,54;UBERON:0001017,5.78e-26,73;UBERON:0001049,8.77e-26,52;UBERON:0005068,8.77e-26,52;UBERON:0006241,8.77e-26,52;UBERON:0007135,8.77e-26,52;UBERON:0001016,3.67e-25,75;UBERON:0003528,4.37e-24,29;UBERON:0002791,4.37e-24,29;UBERON:0001893,4.37e-24,29;UBERON:0002021,6.01e-21,10;UBERON:0000411,6.01e-21,10;UBERON:0001950,6.01e-21,10;UBERON:0002346,3.18e-20,64;UBERON:0003075,3.18e-20,64;UBERON:0007284,3.18e-20,64;UBERON:0002780,8.11e-20,39;UBERON:0001890,8.11e-20,39;UBERON:0006240,8.11e-20,39;UBERON:0003080,3.04e-19,40;UBERON:0004121,5.52e-19,95;UBERON:0000924,5.52e-19,95;UBERON:0006601,5.52e-19,95;UBERON:0001948,2.59e-17,5;UBERON:0002315,2.59e-17,5;UBERON:0010371,3.01e-17,73;UBERON:0002616,2.51e-16,46;UBERON:0000955,6.50e-16,47;UBERON:0006238,6.50e-16,47;UBERON:0003056,3.89e-15,49;UBERON:0000956,1.45e-14,21;UBERON:0001869,1.45e-14,21;UBERON:0000203,1.45e-14,21;UBERON:0002240,2.14e-14,6;UBERON:0005174,2.14e-14,6;UBERON:0001137,2.14e-14,6;UBERON:0010314,7.18e-13,92;UBERON:0002619,7.46e-12,17;UBERON:0002038,8.28e-12,3;UBERON:0009663,8.28e-12,3;UBERON:0009661,8.28e-12,3;UBERON:0000125,8.28e-12,3;UBERON:0002308,8.28e-12,3;UBERON:0004684,8.28e-12,3;UBERON:0002275,8.28e-12,3;UBERON:0002420,4.04e-11,8;UBERON:0007245,4.04e-11,8;UBERON:0010009,4.04e-11,8;UBERON:0010011,4.04e-11,8;UBERON:0000454,4.04e-11,8;UBERON:0002257,8.39e-11,3;UBERON:0000025,1.29e-09,114;UBERON:0002950,5.83e-09,4;UBERON:0001891,5.83e-09,4;UBERON:0009616,5.83e-09,4;UBERON:0010286,5.83e-09,4;UBERON:0004111,1.02e-08,122;UBERON:0002256,3.69e-08,2;UBERON:0003076,4.49e-07,12;UBERON:0003057,4.49e-07,12;UBERON:0011216,4.77e-07,194|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,0,0,0,0,0.988866362566974,0,0.299600110518405,0.384218305321555,0.103689612308478,1.21505344498522,0,2.57085885963423,1.54607978666129,0.367472397644862,0.287536413054709,0.919218786610021,3.30347642998166,1.65993539510744,2.61131106535614,0.263772575460388,1.37231465403614,1.56274011167028,5.862842979029,1.68828783009504,2.29197371665215,1.47314292736834,1.99320353118744,1.1183966749518,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0.83778682725382,0,0,0,0,0.748953197024114,0.457500602818626,0.376963056338593,1.21677024134594,1.02286182932132,2.0778804455956,0.162241263067758,0,0,0,0,0,0,0.180062129805349,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0.19903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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=313 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:139494354..139494365,- | |||
|id=chr5:139494354..139494365,- | |||
|ontology_enrichment_celltype=CL:0000117!5.76e-22!23;CL:0000337!5.76e-22!23;CL:0000540!5.32e-16!33;CL:0000047!5.32e-16!33;CL:0000031!5.32e-16!33;CL:0000404!5.32e-16!33;CL:0002319!2.89e-15!43;CL:0000221!1.01e-14!44;CL:0000133!1.01e-14!44;CL:0000393!2.17e-12!39;CL:0000211!2.17e-12!39;CL:0000055!6.10e-12!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.01e-31,23;CL:0000337,1.01e-31,23;CL:0000540,3.14e-21,33;CL:0000047,3.14e-21,33;CL:0000031,3.14e-21,33;CL:0000404,3.14e-21,33;CL:0000393,1.64e-17,39;CL:0000211,1.64e-17,39;CL:0002319,1.31e-15,43;CL:0000221,3.46e-15,44;CL:0000133,3.46e-15,44;CL:0002610,8.28e-12,3;CL:0002614,8.28e-12,3;CL:0002612,8.39e-11,3;CL:0002321,1.87e-08,70;CL:0002611,3.69e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.87e-32!75;UBERON:0001016!2.87e-32!75;UBERON:0001017!2.89e-32!73;UBERON:0005743!2.89e-32!73;UBERON:0001049!8.64e-30!52;UBERON:0005068!8.64e-30!52;UBERON:0006241!8.64e-30!52;UBERON:0007135!8.64e-30!52;UBERON:0002020!2.81e-29!34;UBERON:0000955!1.89e-27!50;UBERON:0006238!1.89e-27!50;UBERON:0002616!1.47e-26!49;UBERON:0002346!2.50e-25!71;UBERON:0003075!2.50e-25!71;UBERON:0007284!2.50e-25!71;UBERON:0004121!1.21e-24!102;UBERON:0000924!1.21e-24!102;UBERON:0006601!1.21e-24!102;UBERON:0002791!4.72e-23!29;UBERON:0003528!4.72e-23!29;UBERON:0001893!4.72e-23!29;UBERON:0000033!1.40e-21!63;UBERON:0003080!1.68e-20!40;UBERON:0002780!1.54e-19!39;UBERON:0001890!1.54e-19!39;UBERON:0006240!1.54e-19!39;UBERON:0003056!2.94e-17!49;UBERON:0000956!2.46e-14!21;UBERON:0001869!2.46e-14!21;UBERON:0000203!2.46e-14!21;UBERON:0002619!1.31e-12!17;UBERON:0007811!1.47e-12!86;UBERON:0000153!1.63e-10!94;UBERON:0002021!1.98e-10!10;UBERON:0000411!1.98e-10!10;UBERON:0001950!1.98e-10!10;UBERON:0002420!3.38e-10!8;UBERON:0007245!3.38e-10!8;UBERON:0010009!3.38e-10!8;UBERON:0010011!3.38e-10!8;UBERON:0000454!3.38e-10!8;UBERON:0003076!8.85e-10!12;UBERON:0003057!8.85e-10!12;UBERON:0002240!1.80e-08!6;UBERON:0005174!1.80e-08!6;UBERON:0001137!1.80e-08!6;UBERON:0002298!3.31e-08!6;UBERON:0000025!1.26e-07!114;UBERON:0001948!1.58e-07!5;UBERON:0002315!1.58e-07!5;UBERON:0004111!6.15e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.10e-37,34;UBERON:0000073,1.52e-33,54;UBERON:0001017,5.78e-26,73;UBERON:0001049,8.77e-26,52;UBERON:0005068,8.77e-26,52;UBERON:0006241,8.77e-26,52;UBERON:0007135,8.77e-26,52;UBERON:0001016,3.67e-25,75;UBERON:0003528,4.37e-24,29;UBERON:0002791,4.37e-24,29;UBERON:0001893,4.37e-24,29;UBERON:0002021,6.01e-21,10;UBERON:0000411,6.01e-21,10;UBERON:0001950,6.01e-21,10;UBERON:0002346,3.18e-20,64;UBERON:0003075,3.18e-20,64;UBERON:0007284,3.18e-20,64;UBERON:0002780,8.11e-20,39;UBERON:0001890,8.11e-20,39;UBERON:0006240,8.11e-20,39;UBERON:0003080,3.04e-19,40;UBERON:0004121,5.52e-19,95;UBERON:0000924,5.52e-19,95;UBERON:0006601,5.52e-19,95;UBERON:0001948,2.59e-17,5;UBERON:0002315,2.59e-17,5;UBERON:0010371,3.01e-17,73;UBERON:0002616,2.51e-16,46;UBERON:0000955,6.50e-16,47;UBERON:0006238,6.50e-16,47;UBERON:0003056,3.89e-15,49;UBERON:0000956,1.45e-14,21;UBERON:0001869,1.45e-14,21;UBERON:0000203,1.45e-14,21;UBERON:0002240,2.14e-14,6;UBERON:0005174,2.14e-14,6;UBERON:0001137,2.14e-14,6;UBERON:0010314,7.18e-13,92;UBERON:0002619,7.46e-12,17;UBERON:0002038,8.28e-12,3;UBERON:0009663,8.28e-12,3;UBERON:0009661,8.28e-12,3;UBERON:0000125,8.28e-12,3;UBERON:0002308,8.28e-12,3;UBERON:0004684,8.28e-12,3;UBERON:0002275,8.28e-12,3;UBERON:0002420,4.04e-11,8;UBERON:0007245,4.04e-11,8;UBERON:0010009,4.04e-11,8;UBERON:0010011,4.04e-11,8;UBERON:0000454,4.04e-11,8;UBERON:0002257,8.39e-11,3;UBERON:0000025,1.29e-09,114;UBERON:0002950,5.83e-09,4;UBERON:0001891,5.83e-09,4;UBERON:0009616,5.83e-09,4;UBERON:0010286,5.83e-09,4;UBERON:0004111,1.02e-08,122;UBERON:0002256,3.69e-08,2;UBERON:0003076,4.49e-07,12;UBERON:0003057,4.49e-07,12;UBERON:0011216,4.77e-07,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,0,0,0,0,0.988866362566974,0,0.299600110518405,0.384218305321555,0.103689612308478,1.21505344498522,0,2.57085885963423,1.54607978666129,0.367472397644862,0.287536413054709,0.919218786610021,3.30347642998166,1.65993539510744,2.61131106535614,0.263772575460388,1.37231465403614,1.56274011167028,5.862842979029,1.68828783009504,2.29197371665215,1.47314292736834,1.99320353118744,1.1183966749518,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0.83778682725382,0,0,0,0,0.748953197024114,0.457500602818626,0.376963056338593,1.21677024134594,1.02286182932132,2.0778804455956,0.162241263067758,0,0,0,0,0,0,0.180062129805349,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.411618449517138,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0.481651769963376,0.468846746368813,0,0,0,0,0.215423397732799,0,0,0,0.404810701674894,0,0,0.321321316421807,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,1.12950368523413,1.84130094602871,0,1.03111909406213,2.05524755931193,2.2661816921691,1.35004500046361,2.70192721934532,0.453142408984205,1.03552062350364,0,0,0,0,0.209613162627982,0,0.222246727801615,0,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0,0.365855945745545,0,0,0,0.237270036248348,0,0,0,0,0.749431733813838,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr5:139494354..139494365,- | |||
}} |
Revision as of 06:51, 14 September 2013
Short description: | p@chr5:139494354..139494365, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:139494354..139494365, - |
Coexpression cluster: | MCL_coexpression_mm9:313 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.01e-31 | 23 |
neuroblast (sensu Vertebrata) | 1.01e-31 | 23 |
neuron | 3.14e-21 | 33 |
neuronal stem cell | 3.14e-21 | 33 |
neuroblast | 3.14e-21 | 33 |
electrically signaling cell | 3.14e-21 | 33 |
electrically responsive cell | 1.64e-17 | 39 |
electrically active cell | 1.64e-17 | 39 |
neural cell | 1.31e-15 | 43 |
ectodermal cell | 3.46e-15 | 44 |
neurectodermal cell | 3.46e-15 | 44 |
raphe nuclei neuron | 8.28e-12 | 3 |
neuron of the substantia nigra | 8.28e-12 | 3 |
neuron of the ventral spinal cord | 8.39e-11 | 3 |
embryonic cell | 1.87e-08 | 70 |
neuron of the dorsal spinal cord | 3.69e-08 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.