FFCP PHASE1:Hg19::chr9:103235365..103235419,+: Difference between revisions
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{{FFCP | 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18,7.34319574142268,8.01652215796681,8.45433075720573,14.2903297396654,0.303114792872958,1.87574891109325,6.63335551567024,11.9982275199798,0.639701945702943,2.61870874610114,0.645889098360061,0.931120714437869,1.23345048838675,2.29129769801394,1.0105859447911,0,0,0.0673520530145875,0.143444410785353,0.99798106963804,8.3031333983194,3.52200241396461,0,0.449126010532934,0,0.733448665097199,2.03448089157869,0,0,0|short_description=p1@TMEFF1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=8577 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11866 | |||
|TSSclassifier=S | |||
|UniProt=Q8IYR6 | |||
|association_with_transcript=0bp_to_ENST00000374879_5end | |||
|coexpression_cluster_id=C4786 | |||
|description=CAGE_peak_1_at_TMEFF1_5end | |||
|id=chr9:103235365..103235419,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.17e-10!24;CL:0002319!6.11e-10!25;CL:0002321!1.41e-09!248;CL:0000115!5.34e-09!35;CL:0000220!6.19e-09!246;CL:0000133!8.74e-09!59;CL:0002078!2.83e-08!44;CL:0000071!1.28e-07!18;CL:0002546!1.28e-07!18;CL:0000213!1.39e-07!57;CL:0000215!1.39e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.03e-12;24!CL:0002319;2.37e-10;25!CL:0000115;5.08e-10;36!CL:0000071;5.60e-09;18!CL:0000540;7.29e-07;6!CL:0000404;7.29e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.46e-13,24;CL:0000115,4.06e-12,36;CL:0002319,1.15e-10,25;CL:0000071,1.81e-09,18;CL:0002546,1.81e-09,18;CL:0002078,3.81e-09,45;CL:0000133,4.29e-09,59;CL:0000047,6.10e-08,8;CL:0000213,9.93e-08,58;CL:0000215,9.93e-08,58;CL:0000540,7.80e-07,6;CL:0000031,7.80e-07,6;CL:0000404,7.80e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;5.60e-09;18!UBERON:0006601;2.98e-07;82!CL:0000031;7.29e-07;6 | |||
|ontology_enrichment_disease=DOID:3095!1.81e-09!22;DOID:2994!1.81e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.29e-11;22!DOID:2994;1.29e-11;22!DOID:171;2.73e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.63e-11,22;DOID:2994,1.63e-11,22;DOID:171,3.53e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.99e-32!94;UBERON:0001016!3.99e-32!94;UBERON:0005743!4.17e-29!86;UBERON:0001017!3.25e-28!82;UBERON:0000955!5.29e-22!69;UBERON:0006238!5.29e-22!69;UBERON:0001049!5.80e-22!57;UBERON:0005068!5.80e-22!57;UBERON:0006241!5.80e-22!57;UBERON:0007135!5.80e-22!57;UBERON:0002346!3.68e-21!90;UBERON:0003075!1.43e-19!86;UBERON:0007284!1.43e-19!86;UBERON:0000924!2.82e-19!173;UBERON:0006601!2.82e-19!173;UBERON:0003056!6.24e-19!61;UBERON:0002616!1.85e-18!59;UBERON:0001893!5.66e-18!34;UBERON:0003080!5.85e-18!42;UBERON:0002020!6.38e-18!34;UBERON:0003528!6.38e-18!34;UBERON:0004121!6.85e-18!169;UBERON:0002780!7.27e-18!41;UBERON:0001890!7.27e-18!41;UBERON:0006240!7.27e-18!41;UBERON:0000025!1.65e-17!194;UBERON:0002791!1.86e-17!33;UBERON:0001869!8.51e-17!32;UBERON:0000119!3.86e-16!312;UBERON:0000033!5.07e-16!123;UBERON:0000483!7.32e-16!309;UBERON:0000153!2.23e-15!129;UBERON:0007811!2.23e-15!129;UBERON:0004111!5.19e-15!241;UBERON:0000956!8.69e-13!25;UBERON:0000203!8.69e-13!25;UBERON:0000477!5.27e-12!286;UBERON:0002619!1.12e-11!22;UBERON:0000475!2.96e-11!365;UBERON:0001950!1.51e-10!20;UBERON:0000468!3.32e-08!659;UBERON:0001986!1.28e-07!18;UBERON:0004638!1.28e-07!18;UBERON:0004852!1.28e-07!18;UBERON:0002049!2.98e-07!79;UBERON:0007798!2.98e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.41e-20;34!UBERON:0003528;5.13e-20;34!UBERON:0002020;5.13e-20;34!UBERON:0002791;8.08e-20;32!UBERON:0001869;9.95e-20;32!UBERON:0000956;1.44e-16;25!UBERON:0000203;1.44e-16;25!UBERON:0002780;7.35e-16;41!UBERON:0001890;7.35e-16;41!UBERON:0002619;3.98e-15;22!UBERON:0000073;7.54e-15;53!UBERON:0002616;7.54e-15;53!UBERON:0001950;1.23e-13;20!UBERON:0001016;5.52e-12;83!UBERON:0001017;8.62e-12;75!UBERON:0000955;1.50e-11;68!UBERON:0004638;5.60e-09;18!UBERON:0001986;5.60e-09;18!UBERON:0004852;5.60e-09;18!UBERON:0000125;3.18e-08;9!UBERON:0002308;3.18e-08;9!UBERON:0002420;5.66e-08;9!UBERON:0007245;5.66e-08;9!UBERON:0010009;5.66e-08;9!UBERON:0010011;5.66e-08;9!UBERON:0000454;5.66e-08;9!UBERON:0009663;6.64e-07;7 | |||
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| |||
|short_description=p1@TMEFF1 | |||
}} |
Revision as of 06:42, 14 September 2013
Short description: | p1@TMEFF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TMEFF1_5end |
Coexpression cluster: | C4786_occipital_H9_parietal_Neural_duodenum_Neurons_temporal |
Association with transcript: | 0bp_to_ENST00000374879_5end |
EntrezGene: | TMEFF1 |
HGNC: | 11866 |
UniProt: | Q8IYR6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.46e-13 | 24 |
endothelial cell | 4.06e-12 | 36 |
neural cell | 1.15e-10 | 25 |
blood vessel endothelial cell | 1.81e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.81e-09 | 18 |
meso-epithelial cell | 3.81e-09 | 45 |
neurectodermal cell | 4.29e-09 | 59 |
neuronal stem cell | 6.10e-08 | 8 |
lining cell | 9.93e-08 | 58 |
barrier cell | 9.93e-08 | 58 |
neuron | 7.80e-07 | 6 |
neuroblast | 7.80e-07 | 6 |
electrically signaling cell | 7.80e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.63e-11 | 22 |
germ cell cancer | 1.63e-11 | 22 |
neuroectodermal tumor | 3.53e-07 | 10 |
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