FFCP PHASE1:Mm9::chr5:125780785..125780797,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1190|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:125780785..125780797,-|id=chr5:125780785..125780797,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!1.15e-11!49;UBERON:0005173!1.15e-11!49;UBERON:0002417!1.15e-11!49;UBERON:0000916!1.15e-11!49;UBERON:0009569!1.30e-08!66;UBERON:0002107!1.02e-07!22;UBERON:0007499!1.02e-07!22;UBERON:0006925!1.02e-07!22;UBERON:0009497!1.02e-07!22;UBERON:0000015!1.02e-07!22;UBERON:0002423!1.02e-07!22;UBERON:0006235!1.02e-07!22;UBERON:0008835!1.02e-07!22;UBERON:0003894!1.02e-07!22;UBERON:0004161!1.02e-07!22;UBERON:0008836!1.02e-07!22;UBERON:0005256!1.19e-07!47;UBERON:0005177!4.02e-07!85;UBERON:0009854!4.76e-07!23;UBERON:0009856!4.76e-07!23;UBERON:0002369!4.79e-07!7;UBERON:0006858!4.79e-07!7;UBERON:0000466!6.66e-07!79;UBERON:0002365!6.94e-07!25;UBERON:0002330!6.94e-07!25|ontology_enrichment_uberon_v019_2=UBERON:0002369,5.49e-31,7;UBERON:0006858,5.49e-31,7;UBERON:0003064,4.11e-15,14;UBERON:0005256,3.09e-14,45;UBERON:0005172,6.81e-13,49;UBERON:0005173,6.81e-13,49;UBERON:0002417,6.81e-13,49;UBERON:0000916,6.81e-13,49;UBERON:0002368,4.04e-10,60;UBERON:0003104,6.45e-10,61;UBERON:0009142,6.45e-10,61;UBERON:0002530,3.61e-09,65;UBERON:0009569,5.38e-09,66;UBERON:0000949,4.66e-08,72;UBERON:0005177,3.82e-07,79|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0.202475267389826,0,0,0,0,0.340173160604279,0.0992909512008853,0,0.159992422793407,0,0,0.430761996159075,0,0,0,0,1.27006134691926,1.84519436275371,0,0,0,0,0,0.7813353445238,0,0,0,0,0,0,0.183546752161682,0.782391344348039,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0.449949858640699,1.97773272513395,0.7104801149461,0.898800331555214,0.384218305321555,0.207379224616955,0,0,0.285650984403804,0,0.122490799214954,0.0958454710182364,0,0,0.255374676170375,0.307213066512487,0,0.0914876436024097,0,0,0,0,0,0.427115042397309,0,0.151452386666368,0,0.289864488701678,0.860423876981386,0.679971333707751,2.15881276655127,1.29955283489534,0.448026887097336,0.280888840263504,0.170430322578058,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,1.02765491747154,0.258937883647172,2.67195850316685,3.46970653532272,13.0920155674221,8.30215790121811,13.565037649736,5.76184664964954,2.63899841792318,2.47194967734374,0,0,0,0,0,0,0,0.209446706813455,0,0.11981512450592,0,0.254140454146129,0,0,0,0,0,0,0,0.305518091550949,0.124406970610093,0,0,0.260240885925407,0,0,0,0.204109497453984,0.12811372028485,0.281105173679186,0,0,0,0,0,0,0,0,0.199034266818493,0,0.51469581422943,0,0,0.234526059981096,0.180062061461015,0,0,0,0.465067889500816,0.268273401399619,0.467061369468678,0.16455984991348,0.164167464079095,0.162137619091711,0.292399974850665,0,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0.329397909448022,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0,0.569003702859245,0.342745537829186,0,0.203651327845314,0.387904974335251,0.210407459670956,0,0,0.31399745568275,0,0.592905254174298,0.333690211432188,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0.575392274901621,0.648540907100142,1.09824565275233,20.1275489138296,1.48856379067401,1.5601883655728,0.252578877947112,0.358794827043824,0,0.184753190166605,0,0,0,0,0.335012514883631,0.238043640886014,0.195133647857799,0,0,0.159454768657487,0,0.345369963731791,0.578596234326046,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0,0.321321316421807,0.425820255624806,0.178065603667255,0.325773918707152,0,0,0.728341908464944,0.906970670894253,0,0,0.614870295887855,0,0.363533729477506,0,0.316036757935816,0,0,0.680879211507576,0.18006109403131,0,0,0,0.178368817602071,0.164549020602121,0.608929898229199,1.40803024838226,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0.328281799490123,0,0,0.170870880797853,0.206386867963223,0.185194527369712,0.188368457004691,0.27338845544205,0,0.339956859987711,0.279902904647316,0,0,0,0,0.216010681643603,0,0,0.404593039154462,0,0,0.259229946583586,0,0,0.299033092087958,0.66183396182839,0.972255941720238,1.80823752868824,1.520605129417,0.938857909166032,0.2604087696879,0.629156066554265,0.241584120826006,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0.288635524920988,0,0.226730383615211,0,0.448569283047378,0.671538465456314,0,0.187682475451182,0,0,0.501572104035363,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0.177475806159338,0.238436189947321,0.290692833264657,0.0941093804153306,0.0846146078916765,0.365855945745545,0.526139422875686,0.135804113845862,0.561142271657738,0.237270036248348,0.0985044823755635,0.818462086339379,0,0.192906610981141,0.249810577937946,0,0,0,0,0|short_description=p@chr5:125780785..125780797,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1190 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:125780785..125780797,- | |||
|id=chr5:125780785..125780797,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!1.15e-11!49;UBERON:0005173!1.15e-11!49;UBERON:0002417!1.15e-11!49;UBERON:0000916!1.15e-11!49;UBERON:0009569!1.30e-08!66;UBERON:0002107!1.02e-07!22;UBERON:0007499!1.02e-07!22;UBERON:0006925!1.02e-07!22;UBERON:0009497!1.02e-07!22;UBERON:0000015!1.02e-07!22;UBERON:0002423!1.02e-07!22;UBERON:0006235!1.02e-07!22;UBERON:0008835!1.02e-07!22;UBERON:0003894!1.02e-07!22;UBERON:0004161!1.02e-07!22;UBERON:0008836!1.02e-07!22;UBERON:0005256!1.19e-07!47;UBERON:0005177!4.02e-07!85;UBERON:0009854!4.76e-07!23;UBERON:0009856!4.76e-07!23;UBERON:0002369!4.79e-07!7;UBERON:0006858!4.79e-07!7;UBERON:0000466!6.66e-07!79;UBERON:0002365!6.94e-07!25;UBERON:0002330!6.94e-07!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,5.49e-31,7;UBERON:0006858,5.49e-31,7;UBERON:0003064,4.11e-15,14;UBERON:0005256,3.09e-14,45;UBERON:0005172,6.81e-13,49;UBERON:0005173,6.81e-13,49;UBERON:0002417,6.81e-13,49;UBERON:0000916,6.81e-13,49;UBERON:0002368,4.04e-10,60;UBERON:0003104,6.45e-10,61;UBERON:0009142,6.45e-10,61;UBERON:0002530,3.61e-09,65;UBERON:0009569,5.38e-09,66;UBERON:0000949,4.66e-08,72;UBERON:0005177,3.82e-07,79 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0.202475267389826,0,0,0,0,0.340173160604279,0.0992909512008853,0,0.159992422793407,0,0,0.430761996159075,0,0,0,0,1.27006134691926,1.84519436275371,0,0,0,0,0,0.7813353445238,0,0,0,0,0,0,0.183546752161682,0.782391344348039,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0.449949858640699,1.97773272513395,0.7104801149461,0.898800331555214,0.384218305321555,0.207379224616955,0,0,0.285650984403804,0,0.122490799214954,0.0958454710182364,0,0,0.255374676170375,0.307213066512487,0,0.0914876436024097,0,0,0,0,0,0.427115042397309,0,0.151452386666368,0,0.289864488701678,0.860423876981386,0.679971333707751,2.15881276655127,1.29955283489534,0.448026887097336,0.280888840263504,0.170430322578058,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,1.02765491747154,0.258937883647172,2.67195850316685,3.46970653532272,13.0920155674221,8.30215790121811,13.565037649736,5.76184664964954,2.63899841792318,2.47194967734374,0,0,0,0,0,0,0,0.209446706813455,0,0.11981512450592,0,0.254140454146129,0,0,0,0,0,0,0,0.305518091550949,0.124406970610093,0,0,0.260240885925407,0,0,0,0.204109497453984,0.12811372028485,0.281105173679186,0,0,0,0,0,0,0,0,0.199034266818493,0,0.51469581422943,0,0,0.234526059981096,0.180062061461015,0,0,0,0.465067889500816,0.268273401399619,0.467061369468678,0.16455984991348,0.164167464079095,0.162137619091711,0.292399974850665,0,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0.329397909448022,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0,0.569003702859245,0.342745537829186,0,0.203651327845314,0.387904974335251,0.210407459670956,0,0,0.31399745568275,0,0.592905254174298,0.333690211432188,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0.575392274901621,0.648540907100142,1.09824565275233,20.1275489138296,1.48856379067401,1.5601883655728,0.252578877947112,0.358794827043824,0,0.184753190166605,0,0,0,0,0.335012514883631,0.238043640886014,0.195133647857799,0,0,0.159454768657487,0,0.345369963731791,0.578596234326046,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0,0.321321316421807,0.425820255624806,0.178065603667255,0.325773918707152,0,0,0.728341908464944,0.906970670894253,0,0,0.614870295887855,0,0.363533729477506,0,0.316036757935816,0,0,0.680879211507576,0.18006109403131,0,0,0,0.178368817602071,0.164549020602121,0.608929898229199,1.40803024838226,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0.328281799490123,0,0,0.170870880797853,0.206386867963223,0.185194527369712,0.188368457004691,0.27338845544205,0,0.339956859987711,0.279902904647316,0,0,0,0,0.216010681643603,0,0,0.404593039154462,0,0,0.259229946583586,0,0,0.299033092087958,0.66183396182839,0.972255941720238,1.80823752868824,1.520605129417,0.938857909166032,0.2604087696879,0.629156066554265,0.241584120826006,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0.288635524920988,0,0.226730383615211,0,0.448569283047378,0.671538465456314,0,0.187682475451182,0,0,0.501572104035363,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0.177475806159338,0.238436189947321,0.290692833264657,0.0941093804153306,0.0846146078916765,0.365855945745545,0.526139422875686,0.135804113845862,0.561142271657738,0.237270036248348,0.0985044823755635,0.818462086339379,0,0.192906610981141,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr5:125780785..125780797,- | |||
}} |
Revision as of 06:29, 14 September 2013
Short description: | p@chr5:125780785..125780797, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:125780785..125780797, - |
Coexpression cluster: | MCL_coexpression_mm9:1190 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adrenal gland | 5.49e-31 | 7 |
adrenal/interrenal gland | 5.49e-31 | 7 |
intermediate mesoderm | 4.11e-15 | 14 |
trunk mesenchyme | 3.09e-14 | 45 |
abdomen element | 6.81e-13 | 49 |
abdominal segment element | 6.81e-13 | 49 |
abdominal segment of trunk | 6.81e-13 | 49 |
abdomen | 6.81e-13 | 49 |
endocrine gland | 4.04e-10 | 60 |
mesenchyme | 6.45e-10 | 61 |
entire embryonic mesenchyme | 6.45e-10 | 61 |
gland | 3.61e-09 | 65 |
subdivision of trunk | 5.38e-09 | 66 |
endocrine system | 4.66e-08 | 72 |
trunk region element | 3.82e-07 | 79 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.