FFCP PHASE1:Mm9::chr5:115644267..115644283,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=29867|HGNC=|MCL_coexpression_id=2|UniProt=D3Z1M4|association_with_transcript=106bp_to_ENSMUST00000112113_5end|description=CAGE_peak_2_at_Cabp1_5end|id=chr5:115644267..115644283,-|ontology_enrichment_celltype=CL:0000117!1.11e-12!23;CL:0000337!1.11e-12!23;CL:0000540!6.27e-08!33;CL:0000047!6.27e-08!33;CL:0000031!6.27e-08!33;CL:0000404!6.27e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,4.00e-14,23;CL:0000337,4.00e-14,23;CL:0000540,6.56e-09,33;CL:0000047,6.56e-09,33;CL:0000031,6.56e-09,33;CL:0000404,6.56e-09,33;CL:0000393,4.38e-07,39;CL:0000211,4.38e-07,39;CL:0002614,8.47e-07,3;CL:0002612,9.31e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.81e-30!71;UBERON:0003075!1.81e-30!71;UBERON:0007284!1.81e-30!71;UBERON:0000033!3.09e-28!63;UBERON:0001049!2.82e-27!52;UBERON:0005068!2.82e-27!52;UBERON:0006241!2.82e-27!52;UBERON:0007135!2.82e-27!52;UBERON:0000955!2.36e-25!50;UBERON:0006238!2.36e-25!50;UBERON:0002616!1.75e-24!49;UBERON:0003056!2.87e-24!49;UBERON:0004121!1.84e-23!102;UBERON:0000924!1.84e-23!102;UBERON:0006601!1.84e-23!102;UBERON:0000073!2.46e-23!75;UBERON:0001016!2.46e-23!75;UBERON:0002020!7.11e-23!34;UBERON:0001017!1.45e-22!73;UBERON:0005743!1.45e-22!73;UBERON:0003080!2.28e-20!40;UBERON:0002780!1.45e-19!39;UBERON:0001890!1.45e-19!39;UBERON:0006240!1.45e-19!39;UBERON:0002791!9.67e-19!29;UBERON:0003528!9.67e-19!29;UBERON:0001893!9.67e-19!29;UBERON:0007811!1.14e-16!86;UBERON:0000153!2.27e-14!94;UBERON:0000956!1.63e-13!21;UBERON:0001869!1.63e-13!21;UBERON:0000203!1.63e-13!21;UBERON:0002021!8.13e-11!10;UBERON:0000411!8.13e-11!10;UBERON:0001950!8.13e-11!10;UBERON:0002619!1.53e-10!17;UBERON:0003076!2.22e-07!12;UBERON:0003057!2.22e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.55e-43,54;UBERON:0001049,1.21e-39,52;UBERON:0005068,1.21e-39,52;UBERON:0006241,1.21e-39,52;UBERON:0007135,1.21e-39,52;UBERON:0002346,3.66e-37,64;UBERON:0003075,3.66e-37,64;UBERON:0007284,3.66e-37,64;UBERON:0001017,8.10e-34,73;UBERON:0001016,1.07e-32,75;UBERON:0002020,1.35e-32,34;UBERON:0010371,1.40e-31,73;UBERON:0000955,5.00e-31,47;UBERON:0006238,5.00e-31,47;UBERON:0002616,2.41e-29,46;UBERON:0004121,6.24e-29,95;UBERON:0000924,6.24e-29,95;UBERON:0006601,6.24e-29,95;UBERON:0003056,3.35e-24,49;UBERON:0003080,4.22e-24,40;UBERON:0003528,5.42e-24,29;UBERON:0002791,5.42e-24,29;UBERON:0001893,5.42e-24,29;UBERON:0010314,2.24e-23,92;UBERON:0002021,5.01e-23,10;UBERON:0000411,5.01e-23,10;UBERON:0001950,5.01e-23,10;UBERON:0002780,1.46e-22,39;UBERON:0001890,1.46e-22,39;UBERON:0006240,1.46e-22,39;UBERON:0000956,1.40e-21,21;UBERON:0001869,1.40e-21,21;UBERON:0000203,1.40e-21,21;UBERON:0003076,1.72e-16,12;UBERON:0003057,1.72e-16,12;UBERON:0002619,3.80e-15,17;UBERON:0000025,7.60e-14,114;UBERON:0004111,1.99e-12,122;UBERON:0002240,2.15e-12,6;UBERON:0005174,2.15e-12,6;UBERON:0001137,2.15e-12,6;UBERON:0001948,1.90e-10,5;UBERON:0002315,1.90e-10,5;UBERON:0002950,1.45e-08,4;UBERON:0001891,1.45e-08,4;UBERON:0009616,1.45e-08,4;UBERON:0010286,1.45e-08,4;UBERON:0000483,1.72e-08,174;UBERON:0000119,2.67e-08,176;UBERON:0011216,1.60e-07,194;UBERON:0002038,8.47e-07,3;UBERON:0009663,8.47e-07,3;UBERON:0009661,8.47e-07,3;UBERON:0000125,8.47e-07,3;UBERON:0002308,8.47e-07,3;UBERON:0002257,9.31e-07,3|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,2.17748185847803,1.35005938331691,2.3135745748652,6.28432165688368,4.8591079009355,0.244981598429908,0.383381884072945,0,3.30347642998166,1.91531007127782,2.4577045320999,0.395658863190582,0.640413505216868,0.52091337055676,10.8881369610539,1.68828783009504,2.90316670775939,4.41942878210502,4.8406371471695,2.79599168737951,0.075726193333184,0.529000920747499,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0.890652834388949,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0.251333182659351,0,0,0,0,0,0,0,8.19786231632332,6.28340120440365,0,0,0,0,4.49371918214468,7.32000964509802,0.376963056338593,16.339486098074,19.9458056717658,3.32460871295296,2.59586020908412,0.101839363850316,0,0,1.89397670297827,0,0.229902104433473,0.180062129805349,0.753524089178575,0.884474488967262,0.896796041993948,1.21812241927647,4.39795730256327,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,5.04695876553905,0.617427674275707,0,0,0,0,0,0,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0.569003702859245,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,8.0275294993896,7.03270119553219,0,0,0,0,0.215423397732799,0,0,0,0,0,0,5.14114106274891,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70219802876894,0.18006109403131,0,0.214337035031592,0,0.535106452806212,0,0.304464949114599,0,0,0,0,0,0,0,0,0.291480836629851,7.6024373824309,0,0,0,0,0,0,0.339956859987711,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0.299033092087958,0.165458490457098,0.583353565032143,0.258319646955462,0.168956125490778,0.234714477291508,0.911430693907651,1.25831213310853,0.483168241652012,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.90652579663893,10.5874804396651,13.1765968091061,9.28007184655913,17.8121455140367,21.1510291269116,13.5004500046361,14.8605997063993,16.7662691324156,19.6748918465692,0.62272408550506,0.399024873401031,0.512200817262403,0.486213434136588,0,0.183843508450014,0.44449345560323,0.618105171716683,0,0.252697211763798,0,0.188626341386076,0,0,0.17230640686684,0,0.347652977834566,0.192909220463705,0.412085900803307,0.294397840268795,0,0.354951612318675,0.238436189947321,0.145346416632329,0,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0.29551344712669,0.409231043169689,0,0,0.749431733813838,0.233931608445408,0,0.191288332068843,0,0.231867835620421|short_description=p2@Cabp1}} | ||
|EntrezGene=29867 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=D3Z1M4 | |||
|association_with_transcript=106bp_to_ENSMUST00000112113_5end | |||
|description=CAGE_peak_2_at_Cabp1_5end | |||
|id=chr5:115644267..115644283,- | |||
|ontology_enrichment_celltype=CL:0000117!1.11e-12!23;CL:0000337!1.11e-12!23;CL:0000540!6.27e-08!33;CL:0000047!6.27e-08!33;CL:0000031!6.27e-08!33;CL:0000404!6.27e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.00e-14,23;CL:0000337,4.00e-14,23;CL:0000540,6.56e-09,33;CL:0000047,6.56e-09,33;CL:0000031,6.56e-09,33;CL:0000404,6.56e-09,33;CL:0000393,4.38e-07,39;CL:0000211,4.38e-07,39;CL:0002614,8.47e-07,3;CL:0002612,9.31e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.81e-30!71;UBERON:0003075!1.81e-30!71;UBERON:0007284!1.81e-30!71;UBERON:0000033!3.09e-28!63;UBERON:0001049!2.82e-27!52;UBERON:0005068!2.82e-27!52;UBERON:0006241!2.82e-27!52;UBERON:0007135!2.82e-27!52;UBERON:0000955!2.36e-25!50;UBERON:0006238!2.36e-25!50;UBERON:0002616!1.75e-24!49;UBERON:0003056!2.87e-24!49;UBERON:0004121!1.84e-23!102;UBERON:0000924!1.84e-23!102;UBERON:0006601!1.84e-23!102;UBERON:0000073!2.46e-23!75;UBERON:0001016!2.46e-23!75;UBERON:0002020!7.11e-23!34;UBERON:0001017!1.45e-22!73;UBERON:0005743!1.45e-22!73;UBERON:0003080!2.28e-20!40;UBERON:0002780!1.45e-19!39;UBERON:0001890!1.45e-19!39;UBERON:0006240!1.45e-19!39;UBERON:0002791!9.67e-19!29;UBERON:0003528!9.67e-19!29;UBERON:0001893!9.67e-19!29;UBERON:0007811!1.14e-16!86;UBERON:0000153!2.27e-14!94;UBERON:0000956!1.63e-13!21;UBERON:0001869!1.63e-13!21;UBERON:0000203!1.63e-13!21;UBERON:0002021!8.13e-11!10;UBERON:0000411!8.13e-11!10;UBERON:0001950!8.13e-11!10;UBERON:0002619!1.53e-10!17;UBERON:0003076!2.22e-07!12;UBERON:0003057!2.22e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.55e-43,54;UBERON:0001049,1.21e-39,52;UBERON:0005068,1.21e-39,52;UBERON:0006241,1.21e-39,52;UBERON:0007135,1.21e-39,52;UBERON:0002346,3.66e-37,64;UBERON:0003075,3.66e-37,64;UBERON:0007284,3.66e-37,64;UBERON:0001017,8.10e-34,73;UBERON:0001016,1.07e-32,75;UBERON:0002020,1.35e-32,34;UBERON:0010371,1.40e-31,73;UBERON:0000955,5.00e-31,47;UBERON:0006238,5.00e-31,47;UBERON:0002616,2.41e-29,46;UBERON:0004121,6.24e-29,95;UBERON:0000924,6.24e-29,95;UBERON:0006601,6.24e-29,95;UBERON:0003056,3.35e-24,49;UBERON:0003080,4.22e-24,40;UBERON:0003528,5.42e-24,29;UBERON:0002791,5.42e-24,29;UBERON:0001893,5.42e-24,29;UBERON:0010314,2.24e-23,92;UBERON:0002021,5.01e-23,10;UBERON:0000411,5.01e-23,10;UBERON:0001950,5.01e-23,10;UBERON:0002780,1.46e-22,39;UBERON:0001890,1.46e-22,39;UBERON:0006240,1.46e-22,39;UBERON:0000956,1.40e-21,21;UBERON:0001869,1.40e-21,21;UBERON:0000203,1.40e-21,21;UBERON:0003076,1.72e-16,12;UBERON:0003057,1.72e-16,12;UBERON:0002619,3.80e-15,17;UBERON:0000025,7.60e-14,114;UBERON:0004111,1.99e-12,122;UBERON:0002240,2.15e-12,6;UBERON:0005174,2.15e-12,6;UBERON:0001137,2.15e-12,6;UBERON:0001948,1.90e-10,5;UBERON:0002315,1.90e-10,5;UBERON:0002950,1.45e-08,4;UBERON:0001891,1.45e-08,4;UBERON:0009616,1.45e-08,4;UBERON:0010286,1.45e-08,4;UBERON:0000483,1.72e-08,174;UBERON:0000119,2.67e-08,176;UBERON:0011216,1.60e-07,194;UBERON:0002038,8.47e-07,3;UBERON:0009663,8.47e-07,3;UBERON:0009661,8.47e-07,3;UBERON:0000125,8.47e-07,3;UBERON:0002308,8.47e-07,3;UBERON:0002257,9.31e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,2.17748185847803,1.35005938331691,2.3135745748652,6.28432165688368,4.8591079009355,0.244981598429908,0.383381884072945,0,3.30347642998166,1.91531007127782,2.4577045320999,0.395658863190582,0.640413505216868,0.52091337055676,10.8881369610539,1.68828783009504,2.90316670775939,4.41942878210502,4.8406371471695,2.79599168737951,0.075726193333184,0.529000920747499,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0.890652834388949,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0.251333182659351,0,0,0,0,0,0,0,8.19786231632332,6.28340120440365,0,0,0,0,4.49371918214468,7.32000964509802,0.376963056338593,16.339486098074,19.9458056717658,3.32460871295296,2.59586020908412,0.101839363850316,0,0,1.89397670297827,0,0.229902104433473,0.180062129805349,0.753524089178575,0.884474488967262,0.896796041993948,1.21812241927647,4.39795730256327,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,5.04695876553905,0.617427674275707,0,0,0,0,0,0,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0.569003702859245,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,8.0275294993896,7.03270119553219,0,0,0,0,0.215423397732799,0,0,0,0,0,0,5.14114106274891,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70219802876894,0.18006109403131,0,0.214337035031592,0,0.535106452806212,0,0.304464949114599,0,0,0,0,0,0,0,0,0.291480836629851,7.6024373824309,0,0,0,0,0,0,0.339956859987711,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0.299033092087958,0.165458490457098,0.583353565032143,0.258319646955462,0.168956125490778,0.234714477291508,0.911430693907651,1.25831213310853,0.483168241652012,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.90652579663893,10.5874804396651,13.1765968091061,9.28007184655913,17.8121455140367,21.1510291269116,13.5004500046361,14.8605997063993,16.7662691324156,19.6748918465692,0.62272408550506,0.399024873401031,0.512200817262403,0.486213434136588,0,0.183843508450014,0.44449345560323,0.618105171716683,0,0.252697211763798,0,0.188626341386076,0,0,0.17230640686684,0,0.347652977834566,0.192909220463705,0.412085900803307,0.294397840268795,0,0.354951612318675,0.238436189947321,0.145346416632329,0,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0.29551344712669,0.409231043169689,0,0,0.749431733813838,0.233931608445408,0,0.191288332068843,0,0.231867835620421 | |||
|short_description=p2@Cabp1 | |||
}} |
Revision as of 06:05, 14 September 2013
Short description: | p2@Cabp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cabp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 106bp_to_ENSMUST00000112113_5end |
EntrezGene: | Cabp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.00e-14 | 23 |
neuroblast (sensu Vertebrata) | 4.00e-14 | 23 |
neuron | 6.56e-09 | 33 |
neuronal stem cell | 6.56e-09 | 33 |
neuroblast | 6.56e-09 | 33 |
electrically signaling cell | 6.56e-09 | 33 |
electrically responsive cell | 4.38e-07 | 39 |
electrically active cell | 4.38e-07 | 39 |
neuron of the substantia nigra | 8.47e-07 | 3 |
neuron of the ventral spinal cord | 9.31e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.