FFCP PHASE1:Mm9::chr5:108948429..108948439,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=42|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:108948429..108948439,-|id=chr5:108948429..108948439,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!3.83e-24!50;UBERON:0006238!3.83e-24!50;UBERON:0002616!4.62e-22!49;UBERON:0001049!1.45e-20!52;UBERON:0005068!1.45e-20!52;UBERON:0006241!1.45e-20!52;UBERON:0007135!1.45e-20!52;UBERON:0000033!3.51e-20!63;UBERON:0001017!7.23e-19!73;UBERON:0005743!7.23e-19!73;UBERON:0000073!3.05e-18!75;UBERON:0001016!3.05e-18!75;UBERON:0000956!5.86e-16!21;UBERON:0001869!5.86e-16!21;UBERON:0000203!5.86e-16!21;UBERON:0002346!1.59e-15!71;UBERON:0003075!1.59e-15!71;UBERON:0007284!1.59e-15!71;UBERON:0007811!1.36e-13!86;UBERON:0002619!1.37e-13!17;UBERON:0004121!1.82e-13!102;UBERON:0000924!1.82e-13!102;UBERON:0006601!1.82e-13!102;UBERON:0002791!2.77e-13!29;UBERON:0003528!2.77e-13!29;UBERON:0001893!2.77e-13!29;UBERON:0002020!4.38e-13!34;UBERON:0003080!1.93e-12!40;UBERON:0000153!4.70e-12!94;UBERON:0002021!2.58e-11!10;UBERON:0000411!2.58e-11!10;UBERON:0001950!2.58e-11!10;UBERON:0003056!3.83e-11!49;UBERON:0002780!5.46e-11!39;UBERON:0001890!5.46e-11!39;UBERON:0006240!5.46e-11!39;UBERON:0003076!1.32e-09!12;UBERON:0003057!1.32e-09!12;UBERON:0004733!2.41e-09!6;UBERON:0004732!2.41e-09!6;UBERON:0002028!2.41e-09!6;UBERON:0007277!2.41e-09!6;UBERON:0002298!5.17e-09!6;UBERON:0001896!5.93e-08!2;UBERON:0005290!5.93e-08!2;UBERON:0010096!5.93e-08!2;UBERON:0000025!3.92e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0004733,1.98e-20,6;UBERON:0004732,1.98e-20,6;UBERON:0002028,1.98e-20,6;UBERON:0007277,1.98e-20,6;UBERON:0001896,9.49e-16,2;UBERON:0002298,9.49e-16,2;UBERON:0005290,9.49e-16,2;UBERON:0010096,9.49e-16,2;UBERON:0003076,8.07e-11,12;UBERON:0003057,8.07e-11,12;UBERON:0002037,1.23e-08,4;UBERON:0002680,1.23e-08,4;UBERON:0001895,1.23e-08,4;UBERON:0010092,1.23e-08,4;UBERON:0006215,1.23e-08,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0.0958454710182364,0,0,0.383062014255563,0.921639199537461,0,0,0,0,0,0.763991238884051,0,0.711858403995515,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,13.6140359428746,0,0,0,0,0.149790639404823,0,0,0.347648640384553,0.255715457330331,0,0.324482526135515,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,1.05490517932983,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,0,0.343706364687375,0.685082519770642,0.755393897389701,0.675022500231806,0,0,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr5:108948429..108948439,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=42 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:108948429..108948439,- | |||
|id=chr5:108948429..108948439,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!3.83e-24!50;UBERON:0006238!3.83e-24!50;UBERON:0002616!4.62e-22!49;UBERON:0001049!1.45e-20!52;UBERON:0005068!1.45e-20!52;UBERON:0006241!1.45e-20!52;UBERON:0007135!1.45e-20!52;UBERON:0000033!3.51e-20!63;UBERON:0001017!7.23e-19!73;UBERON:0005743!7.23e-19!73;UBERON:0000073!3.05e-18!75;UBERON:0001016!3.05e-18!75;UBERON:0000956!5.86e-16!21;UBERON:0001869!5.86e-16!21;UBERON:0000203!5.86e-16!21;UBERON:0002346!1.59e-15!71;UBERON:0003075!1.59e-15!71;UBERON:0007284!1.59e-15!71;UBERON:0007811!1.36e-13!86;UBERON:0002619!1.37e-13!17;UBERON:0004121!1.82e-13!102;UBERON:0000924!1.82e-13!102;UBERON:0006601!1.82e-13!102;UBERON:0002791!2.77e-13!29;UBERON:0003528!2.77e-13!29;UBERON:0001893!2.77e-13!29;UBERON:0002020!4.38e-13!34;UBERON:0003080!1.93e-12!40;UBERON:0000153!4.70e-12!94;UBERON:0002021!2.58e-11!10;UBERON:0000411!2.58e-11!10;UBERON:0001950!2.58e-11!10;UBERON:0003056!3.83e-11!49;UBERON:0002780!5.46e-11!39;UBERON:0001890!5.46e-11!39;UBERON:0006240!5.46e-11!39;UBERON:0003076!1.32e-09!12;UBERON:0003057!1.32e-09!12;UBERON:0004733!2.41e-09!6;UBERON:0004732!2.41e-09!6;UBERON:0002028!2.41e-09!6;UBERON:0007277!2.41e-09!6;UBERON:0002298!5.17e-09!6;UBERON:0001896!5.93e-08!2;UBERON:0005290!5.93e-08!2;UBERON:0010096!5.93e-08!2;UBERON:0000025!3.92e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004733,1.98e-20,6;UBERON:0004732,1.98e-20,6;UBERON:0002028,1.98e-20,6;UBERON:0007277,1.98e-20,6;UBERON:0001896,9.49e-16,2;UBERON:0002298,9.49e-16,2;UBERON:0005290,9.49e-16,2;UBERON:0010096,9.49e-16,2;UBERON:0003076,8.07e-11,12;UBERON:0003057,8.07e-11,12;UBERON:0002037,1.23e-08,4;UBERON:0002680,1.23e-08,4;UBERON:0001895,1.23e-08,4;UBERON:0010092,1.23e-08,4;UBERON:0006215,1.23e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0.0958454710182364,0,0,0.383062014255563,0.921639199537461,0,0,0,0,0,0.763991238884051,0,0.711858403995515,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,13.6140359428746,0,0,0,0,0.149790639404823,0,0,0.347648640384553,0.255715457330331,0,0.324482526135515,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,1.05490517932983,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,0,0.343706364687375,0.685082519770642,0.755393897389701,0.675022500231806,0,0,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:108948429..108948439,- | |||
}} |
Revision as of 05:53, 14 September 2013
Short description: | p@chr5:108948429..108948439, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:108948429..108948439, - |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
segmental subdivision of hindbrain | 1.98e-20 | 6 |
segmental subdivision of nervous system | 1.98e-20 | 6 |
hindbrain | 1.98e-20 | 6 |
presumptive hindbrain | 1.98e-20 | 6 |
medulla oblongata | 9.49e-16 | 2 |
brainstem | 9.49e-16 | 2 |
myelencephalon | 9.49e-16 | 2 |
future myelencephalon | 9.49e-16 | 2 |
posterior neural tube | 8.07e-11 | 12 |
chordal neural plate | 8.07e-11 | 12 |
cerebellum | 1.23e-08 | 4 |
regional part of metencephalon | 1.23e-08 | 4 |
metencephalon | 1.23e-08 | 4 |
future metencephalon | 1.23e-08 | 4 |
rhombic lip | 1.23e-08 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.