FFCP PHASE1:Hg19::chr8:55471789..55471798,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6101|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=10263|TSSclassifier=S|UniProt=E7EVW9|association_with_transcript=60bp_to_ENST00000427058_5end|coexpression_cluster_id=C131|description=CAGE_peak_7_at_RP1_5end|id=chr8:55471789..55471798,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0008947;8.32e-29;29!UBERON:0001041;1.04e-10;30|ontology_enrichment_disease=DOID:3908!2.17e-09!5|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003127!1.34e-22!2;UBERON:0000341!2.85e-22!2;UBERON:0005178!8.12e-15!34;UBERON:0002224!8.12e-15!34;UBERON:0005181!2.25e-14!35;UBERON:0008947!3.46e-13!38;UBERON:0003258!3.46e-13!38;UBERON:0002171!2.93e-12!1;UBERON:0006518!2.93e-12!1;UBERON:0008949!2.93e-12!1;UBERON:0000101!2.93e-12!1;UBERON:0002167!2.93e-12!1;UBERON:0002048!4.15e-12!22;UBERON:0000117!4.15e-12!22;UBERON:0000171!4.15e-12!22;UBERON:0000170!4.15e-12!22;UBERON:0005597!4.15e-12!22;UBERON:0000118!4.15e-12!22;UBERON:0005153!5.53e-10!37;UBERON:0000915!1.88e-09!52;UBERON:0000065!2.92e-09!53;UBERON:0007196!1.97e-07!14;UBERON:0001558!1.97e-07!14;UBERON:0005911!2.52e-07!82;UBERON:0005157!4.01e-07!51;UBERON:0003126!4.20e-07!7;UBERON:0001005!4.20e-07!7|ontology_enrichment_uberon_v019=UBERON:0003127;5.53e-66;2!UBERON:0002171;2.58e-34;1!UBERON:0006518;2.58e-34;1!UBERON:0008949;2.58e-34;1!UBERON:0000101;2.58e-34;1!UBERON:0002167;2.58e-34;1!UBERON:0003126;9.48e-20;7!UBERON:0001005;9.48e-20;7!UBERON:0005178;1.40e-19;34!UBERON:0002224;1.40e-19;34!UBERON:0000341;9.86e-18;2!UBERON:0005181;6.98e-17;35!UBERON:0000065;1.20e-14;44!UBERON:0002048;2.55e-14;22!UBERON:0000117;2.55e-14;22!UBERON:0000171;2.55e-14;22!UBERON:0000170;2.55e-14;22!UBERON:0000915;1.06e-10;52!UBERON:0007196;8.85e-10;15!UBERON:0001558;8.85e-10;15!UBERON:0001004;3.89e-08;65!UBERON:0000974;8.72e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0003127,2.84e-66,2;UBERON:0002171,2.58e-34,1;UBERON:0006518,2.58e-34,1;UBERON:0008949,2.58e-34,1;UBERON:0000101,2.58e-34,1;UBERON:0002167,2.58e-34,1;UBERON:0005178,1.07e-24,34;UBERON:0002224,1.07e-24,34;UBERON:0005181,5.19e-24,35;UBERON:0008947,3.64e-22,38;UBERON:0003258,3.64e-22,38;UBERON:0003126,7.84e-20,7;UBERON:0001005,7.84e-20,7;UBERON:0000341,1.27e-17,2;UBERON:0000915,2.36e-16,52;UBERON:0000065,9.10e-16,54;UBERON:0002048,2.61e-14,22;UBERON:0000117,2.61e-14,22;UBERON:0000171,2.61e-14,22;UBERON:0000170,2.61e-14,22;UBERON:0005597,2.61e-14,22;UBERON:0000118,2.61e-14,22;UBERON:0001004,1.22e-11,74;UBERON:0001041,5.77e-10,87;UBERON:0007196,8.10e-10,15;UBERON:0001558,8.10e-10,15;UBERON:0005153,8.17e-09,37;UBERON:0005177,1.22e-08,101;UBERON:0009569,7.95e-08,112;UBERON:0004921,2.19e-07,118;UBERON:0005157,4.40e-07,47|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0.950403028674658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28144895081234,6.13096789888697,2.07119527673598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,1.1903221573187,0,0,0.112131862580613,0,0,0,0,0,1.43444410785353,1.33064142618405,0,0,0,0,0,0,0,0,0,0|short_description=p7@RP1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6101 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=10263 | |||
|TSSclassifier=S | |||
|UniProt=E7EVW9 | |||
|association_with_transcript=60bp_to_ENST00000427058_5end | |||
|coexpression_cluster_id=C131 | |||
|description=CAGE_peak_7_at_RP1_5end | |||
|id=chr8:55471789..55471798,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;8.32e-29;29!UBERON:0001041;1.04e-10;30 | |||
|ontology_enrichment_disease=DOID:3908!2.17e-09!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!1.34e-22!2;UBERON:0000341!2.85e-22!2;UBERON:0005178!8.12e-15!34;UBERON:0002224!8.12e-15!34;UBERON:0005181!2.25e-14!35;UBERON:0008947!3.46e-13!38;UBERON:0003258!3.46e-13!38;UBERON:0002171!2.93e-12!1;UBERON:0006518!2.93e-12!1;UBERON:0008949!2.93e-12!1;UBERON:0000101!2.93e-12!1;UBERON:0002167!2.93e-12!1;UBERON:0002048!4.15e-12!22;UBERON:0000117!4.15e-12!22;UBERON:0000171!4.15e-12!22;UBERON:0000170!4.15e-12!22;UBERON:0005597!4.15e-12!22;UBERON:0000118!4.15e-12!22;UBERON:0005153!5.53e-10!37;UBERON:0000915!1.88e-09!52;UBERON:0000065!2.92e-09!53;UBERON:0007196!1.97e-07!14;UBERON:0001558!1.97e-07!14;UBERON:0005911!2.52e-07!82;UBERON:0005157!4.01e-07!51;UBERON:0003126!4.20e-07!7;UBERON:0001005!4.20e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;5.53e-66;2!UBERON:0002171;2.58e-34;1!UBERON:0006518;2.58e-34;1!UBERON:0008949;2.58e-34;1!UBERON:0000101;2.58e-34;1!UBERON:0002167;2.58e-34;1!UBERON:0003126;9.48e-20;7!UBERON:0001005;9.48e-20;7!UBERON:0005178;1.40e-19;34!UBERON:0002224;1.40e-19;34!UBERON:0000341;9.86e-18;2!UBERON:0005181;6.98e-17;35!UBERON:0000065;1.20e-14;44!UBERON:0002048;2.55e-14;22!UBERON:0000117;2.55e-14;22!UBERON:0000171;2.55e-14;22!UBERON:0000170;2.55e-14;22!UBERON:0000915;1.06e-10;52!UBERON:0007196;8.85e-10;15!UBERON:0001558;8.85e-10;15!UBERON:0001004;3.89e-08;65!UBERON:0000974;8.72e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,2.84e-66,2;UBERON:0002171,2.58e-34,1;UBERON:0006518,2.58e-34,1;UBERON:0008949,2.58e-34,1;UBERON:0000101,2.58e-34,1;UBERON:0002167,2.58e-34,1;UBERON:0005178,1.07e-24,34;UBERON:0002224,1.07e-24,34;UBERON:0005181,5.19e-24,35;UBERON:0008947,3.64e-22,38;UBERON:0003258,3.64e-22,38;UBERON:0003126,7.84e-20,7;UBERON:0001005,7.84e-20,7;UBERON:0000341,1.27e-17,2;UBERON:0000915,2.36e-16,52;UBERON:0000065,9.10e-16,54;UBERON:0002048,2.61e-14,22;UBERON:0000117,2.61e-14,22;UBERON:0000171,2.61e-14,22;UBERON:0000170,2.61e-14,22;UBERON:0005597,2.61e-14,22;UBERON:0000118,2.61e-14,22;UBERON:0001004,1.22e-11,74;UBERON:0001041,5.77e-10,87;UBERON:0007196,8.10e-10,15;UBERON:0001558,8.10e-10,15;UBERON:0005153,8.17e-09,37;UBERON:0005177,1.22e-08,101;UBERON:0009569,7.95e-08,112;UBERON:0004921,2.19e-07,118;UBERON:0005157,4.40e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0.950403028674658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28144895081234,6.13096789888697,2.07119527673598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,1.1903221573187,0,0,0.112131862580613,0,0,0,0,0,1.43444410785353,1.33064142618405,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@RP1 | |||
}} |
Revision as of 05:33, 14 September 2013
Short description: | p7@RP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_RP1_5end |
Coexpression cluster: | C131_lung_trachea_Alveolar_thyroid_umbilical_throat_skin |
Association with transcript: | 60bp_to_ENST00000427058_5end |
EntrezGene: | RP1 |
HGNC: | 10263 |
UniProt: | E7EVW9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 2.84e-66 | 2 |
lower lobe of right lung | 2.58e-34 | 1 |
right lung lobe | 2.58e-34 | 1 |
lower lobe of lung | 2.58e-34 | 1 |
lobe of lung | 2.58e-34 | 1 |
right lung | 2.58e-34 | 1 |
thoracic cavity element | 1.07e-24 | 34 |
thoracic cavity | 1.07e-24 | 34 |
thoracic segment organ | 5.19e-24 | 35 |
respiratory primordium | 3.64e-22 | 38 |
endoderm of foregut | 3.64e-22 | 38 |
trachea | 7.84e-20 | 7 |
respiratory airway | 7.84e-20 | 7 |
throat | 1.27e-17 | 2 |
thoracic segment of trunk | 2.36e-16 | 52 |
respiratory tract | 9.10e-16 | 54 |
lung | 2.61e-14 | 22 |
respiratory tube | 2.61e-14 | 22 |
respiration organ | 2.61e-14 | 22 |
pair of lungs | 2.61e-14 | 22 |
lung primordium | 2.61e-14 | 22 |
lung bud | 2.61e-14 | 22 |
respiratory system | 1.22e-11 | 74 |
foregut | 5.77e-10 | 87 |
tracheobronchial tree | 8.10e-10 | 15 |
lower respiratory tract | 8.10e-10 | 15 |
epithelial bud | 8.17e-09 | 37 |
trunk region element | 1.22e-08 | 101 |
subdivision of trunk | 7.95e-08 | 112 |
subdivision of digestive tract | 2.19e-07 | 118 |
epithelial fold | 4.40e-07 | 47 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.