FFCP PHASE1:Mm9::chr4:57155977..57156033,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=54357|HGNC=|MCL_coexpression_id=12|UniProt=Q3TMR3,Q9JMC8|association_with_transcript=0bp_to_NM_019427,uc008sxy.2,uc008sxz.2_5end|description=CAGE_peak_1_at_Epb4.1l4b_5end|id=chr4:57155977..57156033,-|ontology_enrichment_celltype=CL:0000066!4.86e-07!25|ontology_enrichment_celltype_v019_2=CL:0000066,6.85e-08,25;CL:0002563,8.88e-07,9;CL:0002251,8.88e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!5.42e-18!43;UBERON:0005409!3.07e-14!59;UBERON:0004119!5.79e-11!130;UBERON:0000925!5.79e-11!130;UBERON:0006595!5.79e-11!130;UBERON:0001007!8.61e-11!128;UBERON:0001555!8.61e-11!128;UBERON:0007026!8.61e-11!128;UBERON:0000344!3.41e-10!15;UBERON:0004921!5.96e-10!126;UBERON:0004185!5.96e-10!126;UBERON:0001242!4.37e-09!13;UBERON:0000060!4.37e-09!13;UBERON:0001262!4.37e-09!13;UBERON:0004786!4.37e-09!13;UBERON:0007023!3.75e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.63e-17,31;UBERON:0005409,3.23e-12,47;UBERON:0000344,1.32e-10,15;UBERON:0001242,1.91e-09,13;UBERON:0001262,1.91e-09,13;UBERON:0004786,1.91e-09,13;UBERON:0004119,1.18e-08,118;UBERON:0000925,1.18e-08,118;UBERON:0006595,1.18e-08,118;UBERON:0001007,1.69e-08,116;UBERON:0001555,1.69e-08,116;UBERON:0007026,1.69e-08,116;UBERON:0004921,9.83e-08,114;UBERON:0007023,4.82e-07,51;UBERON:0003350,8.88e-07,9;UBERON:0004808,8.88e-07,9;UBERON:0001277,8.88e-07,9|phase1_expression=2.24208385946712,154.596105584237,184.729691192152,242.878761679385,260.966675302047,42.8092143375319,45.5544649161275,0,0,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0,4.5072943780067,11.9149141441062,13.8435888243636,58.3972343195934,62.6287337313374,143.557991028755,97.3522111319509,71.9673917170869,145.747962723039,105.096564109891,64.9670396220043,1.90509202037889,1.84519436275371,0,25.4189425381122,27.0962471934343,30.0128953705683,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0,0.782391344348039,0.65407546914134,2.41654801007919,2.52758868796568,0.55994568650145,5.75010257459886,0.167782606057736,0,0,0.257259436035947,0,0,1.01158230429799,0,1.90149421051854,0,0,0,0,0,2.09720077362883,0.384218305321555,0.103689612308478,0,0,3.14216082844184,3.53389665522582,0,0,0,2.20231761998777,3.95830748064082,3.22573719838111,0.395658863190582,0.731901148819277,1.56274011167028,5.58365998002762,1.68828783009504,2.75036845998258,4.12480019663135,3.55929201997757,1.1183966749518,22.2635008399561,32.7980570863449,2.89864488701678,19.7897491705719,22.4390540123558,58.8276478885221,36.3874793770695,50.1790113549016,22.049773960685,0,0,0,11.1266301623578,0,0,0,8.65964164044856,9.88103475352884,8.59391556525132,34.7118994345942,0.517875767294343,0.29688427812965,0.520455980298408,0.608930956624282,0.461230994512117,0.753613202763113,0.823120949949934,1.0053327306374,21.5059621928905,1.73519228303894,0.884610551949874,1.45590164952668,2.65009822152472,0.969750506270444,61.5092812019803,9.07620470735796,5.23616767033638,108.569248463651,4.91242010474273,3.59941638596045,2.28726408731516,7.78911324905078,2.74500361691176,0,2.78118912307642,1.02286182932132,4.77912502486988,2.10913641988085,1.12023300235348,4.47865094196335,8.84529654517861,15.1518136238261,0.650602214813519,0.689706313300419,1.62055916824814,3.31550599238573,5.98721192531685,2.43416068541215,3.46696380870997,6.20888089773638,0.431135985865684,0.189106080167819,0.527853372491847,0.876782929710299,1.39023624612799,0.348252166522167,2.88094990971121,0.796137067273973,0.702213187313235,0.51469581422943,0.568326998791185,0,0,0.180062061461015,0.23674473558521,0.393528463494808,0.154267112887378,0.232533944750408,0.268273401399619,0.116765342367169,0.822799249567402,1.14917224855367,1.29710095273369,1.16959989940266,1.09775057645525,1.34206418760372,3.78521907415429,0.514523061896422,222.70225973108,118.473853865268,0.213288250535234,1.16118335930219,7.7320476793256,19.3616183638409,27.1301213490742,41.4691864925379,106.769038847515,65.0560871159843,60.5717853208649,54.7130298113165,66.48275370762,110.554787264469,92.5070853463691,110.722547929428,0.189667900953082,0.228497025219458,3.38123207019241,3.05476991767971,2.52138233317913,4.27828501330943,5.88099795255593,5.75679577120448,6.90794402502049,6.29325536001183,61.0692411799527,0.333690211432188,1.76903095601883,1.57403478669398,1.21716072833102,2.65294875727659,6.62027214631691,14.6725030099913,7.7824908852017,12.0807021802756,18.6898668485561,14.5134969590716,23.0907878104775,30.5620442316005,33.0091240880318,39.5603687517961,11.4546977903295,0.37898282354097,0.162964976442026,0.169745085775188,0.938760993154008,2.68010011906905,8.33152743101048,7.21994497073856,3.31033802623001,3.32197034473162,3.02964060449226,4.91589944147214,4.48980952851328,8.67894351489069,0,0,24.0964493779328,18.4877620024171,4.97706828962155,3.7507739709505,0,1.76729649043061,12.304820557234,12.1036010731958,15.0796378412959,26.0475989768282,23.3938607786514,22.6461224631066,14.9779959619711,16.9508397588561,16.602086673754,2.24924921495265,3.12268187458191,1.95872164033981,0.325773918707152,5.27904393512113,21.2392221343941,0.485561272309963,1.81394134178851,8.11001842950362,14.7650946440386,13.5271465095328,13.4382712447475,6.90714086007261,11.4079161083111,17.0659849285341,29.5172104009997,13.4076206222643,7.83011093233712,0.18006109403131,0.129358683782755,0.428674070063185,0.354680467284547,0.356737635204141,2.46823530903181,3.04464949114599,4.22409074514679,4.87213762986786,15.2164594657924,8.73897140589844,1.61464426695906,3.73940134554566,8.71418111222896,9.84845398470368,91.816463538403,6.86073617438886,0.170870880797853,0.206386867963223,0.185194527369712,0.376736914009382,0.27338845544205,0,5.09935289981566,6.15786390224095,6.21899882119907,31.5041303944987,0.316335993581135,2.43983360552218,5.61627772273367,4.39085421630384,8.51613998610093,7.01294601201068,12.5633252702511,17.799404054914,79.7132085744526,7.45607175704311,0,0,0,0.388902376688095,0.258319646955462,0,0.352071715937262,1.43224823328345,0.524296722128554,0.724752362478018,0.288030006257865,0.632022241256357,0.405450430580328,0.410843828659309,0.129920822977795,0.358053391334963,0.39736270956253,0.721172697119813,0.295379054349154,1.11063094942962,0.457240839929999,0.604957110821043,1.46186821109629,0.865906574762965,1.40252282617883,3.62768613784338,0,0.179427713218951,0.167884616364078,9.85266929564171,4.69206188627955,6.04400360081975,6.00231461421384,9.02829787263654,1.12950368523413,0.920650473014354,1.71868654031819,0.343706364687375,0.685082519770642,2.2661816921691,2.02506750069542,3.15224842256954,1.35942722695261,4.14208249401456,0.207574695168353,0,0.341467211508268,1.70174701947806,0.419226325255965,3.49302666055027,5.778414922842,5.97501665992793,5.45562656306086,6.31743029409494,4.30914809813408,6.41329560712659,4.02658482120494,5.95433917365284,4.82457939227151,6.19181798667996,4.63537303779422,4.43691207066522,4.12085900803307,3.97437084362873,4.80016953339582,4.08194354166476,3.57654284920981,5.52316383202848,5.45834406408918,4.90764725771724,4.57319932181931,3.6829759601298,5.02475221229689,6.17256498823512,6.16902094245706,5.51625101303155,6.13846564754534,5.11291575913688,4.82266527452853,0.499621155875892,4.21076895201735,4.51229213501426,4.97349663378993,4.63241980150983,3.01428186306548|short_description=p1@Epb4.1l4b}} | ||
|EntrezGene=54357 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=Q3TMR3,Q9JMC8 | |||
|association_with_transcript=0bp_to_NM_019427,uc008sxy.2,uc008sxz.2_5end | |||
|description=CAGE_peak_1_at_Epb4.1l4b_5end | |||
|id=chr4:57155977..57156033,- | |||
|ontology_enrichment_celltype=CL:0000066!4.86e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.85e-08,25;CL:0002563,8.88e-07,9;CL:0002251,8.88e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.42e-18!43;UBERON:0005409!3.07e-14!59;UBERON:0004119!5.79e-11!130;UBERON:0000925!5.79e-11!130;UBERON:0006595!5.79e-11!130;UBERON:0001007!8.61e-11!128;UBERON:0001555!8.61e-11!128;UBERON:0007026!8.61e-11!128;UBERON:0000344!3.41e-10!15;UBERON:0004921!5.96e-10!126;UBERON:0004185!5.96e-10!126;UBERON:0001242!4.37e-09!13;UBERON:0000060!4.37e-09!13;UBERON:0001262!4.37e-09!13;UBERON:0004786!4.37e-09!13;UBERON:0007023!3.75e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.63e-17,31;UBERON:0005409,3.23e-12,47;UBERON:0000344,1.32e-10,15;UBERON:0001242,1.91e-09,13;UBERON:0001262,1.91e-09,13;UBERON:0004786,1.91e-09,13;UBERON:0004119,1.18e-08,118;UBERON:0000925,1.18e-08,118;UBERON:0006595,1.18e-08,118;UBERON:0001007,1.69e-08,116;UBERON:0001555,1.69e-08,116;UBERON:0007026,1.69e-08,116;UBERON:0004921,9.83e-08,114;UBERON:0007023,4.82e-07,51;UBERON:0003350,8.88e-07,9;UBERON:0004808,8.88e-07,9;UBERON:0001277,8.88e-07,9 | |||
|phase1_expression=2.24208385946712,154.596105584237,184.729691192152,242.878761679385,260.966675302047,42.8092143375319,45.5544649161275,0,0,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0,4.5072943780067,11.9149141441062,13.8435888243636,58.3972343195934,62.6287337313374,143.557991028755,97.3522111319509,71.9673917170869,145.747962723039,105.096564109891,64.9670396220043,1.90509202037889,1.84519436275371,0,25.4189425381122,27.0962471934343,30.0128953705683,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0,0.782391344348039,0.65407546914134,2.41654801007919,2.52758868796568,0.55994568650145,5.75010257459886,0.167782606057736,0,0,0.257259436035947,0,0,1.01158230429799,0,1.90149421051854,0,0,0,0,0,2.09720077362883,0.384218305321555,0.103689612308478,0,0,3.14216082844184,3.53389665522582,0,0,0,2.20231761998777,3.95830748064082,3.22573719838111,0.395658863190582,0.731901148819277,1.56274011167028,5.58365998002762,1.68828783009504,2.75036845998258,4.12480019663135,3.55929201997757,1.1183966749518,22.2635008399561,32.7980570863449,2.89864488701678,19.7897491705719,22.4390540123558,58.8276478885221,36.3874793770695,50.1790113549016,22.049773960685,0,0,0,11.1266301623578,0,0,0,8.65964164044856,9.88103475352884,8.59391556525132,34.7118994345942,0.517875767294343,0.29688427812965,0.520455980298408,0.608930956624282,0.461230994512117,0.753613202763113,0.823120949949934,1.0053327306374,21.5059621928905,1.73519228303894,0.884610551949874,1.45590164952668,2.65009822152472,0.969750506270444,61.5092812019803,9.07620470735796,5.23616767033638,108.569248463651,4.91242010474273,3.59941638596045,2.28726408731516,7.78911324905078,2.74500361691176,0,2.78118912307642,1.02286182932132,4.77912502486988,2.10913641988085,1.12023300235348,4.47865094196335,8.84529654517861,15.1518136238261,0.650602214813519,0.689706313300419,1.62055916824814,3.31550599238573,5.98721192531685,2.43416068541215,3.46696380870997,6.20888089773638,0.431135985865684,0.189106080167819,0.527853372491847,0.876782929710299,1.39023624612799,0.348252166522167,2.88094990971121,0.796137067273973,0.702213187313235,0.51469581422943,0.568326998791185,0,0,0.180062061461015,0.23674473558521,0.393528463494808,0.154267112887378,0.232533944750408,0.268273401399619,0.116765342367169,0.822799249567402,1.14917224855367,1.29710095273369,1.16959989940266,1.09775057645525,1.34206418760372,3.78521907415429,0.514523061896422,222.70225973108,118.473853865268,0.213288250535234,1.16118335930219,7.7320476793256,19.3616183638409,27.1301213490742,41.4691864925379,106.769038847515,65.0560871159843,60.5717853208649,54.7130298113165,66.48275370762,110.554787264469,92.5070853463691,110.722547929428,0.189667900953082,0.228497025219458,3.38123207019241,3.05476991767971,2.52138233317913,4.27828501330943,5.88099795255593,5.75679577120448,6.90794402502049,6.29325536001183,61.0692411799527,0.333690211432188,1.76903095601883,1.57403478669398,1.21716072833102,2.65294875727659,6.62027214631691,14.6725030099913,7.7824908852017,12.0807021802756,18.6898668485561,14.5134969590716,23.0907878104775,30.5620442316005,33.0091240880318,39.5603687517961,11.4546977903295,0.37898282354097,0.162964976442026,0.169745085775188,0.938760993154008,2.68010011906905,8.33152743101048,7.21994497073856,3.31033802623001,3.32197034473162,3.02964060449226,4.91589944147214,4.48980952851328,8.67894351489069,0,0,24.0964493779328,18.4877620024171,4.97706828962155,3.7507739709505,0,1.76729649043061,12.304820557234,12.1036010731958,15.0796378412959,26.0475989768282,23.3938607786514,22.6461224631066,14.9779959619711,16.9508397588561,16.602086673754,2.24924921495265,3.12268187458191,1.95872164033981,0.325773918707152,5.27904393512113,21.2392221343941,0.485561272309963,1.81394134178851,8.11001842950362,14.7650946440386,13.5271465095328,13.4382712447475,6.90714086007261,11.4079161083111,17.0659849285341,29.5172104009997,13.4076206222643,7.83011093233712,0.18006109403131,0.129358683782755,0.428674070063185,0.354680467284547,0.356737635204141,2.46823530903181,3.04464949114599,4.22409074514679,4.87213762986786,15.2164594657924,8.73897140589844,1.61464426695906,3.73940134554566,8.71418111222896,9.84845398470368,91.816463538403,6.86073617438886,0.170870880797853,0.206386867963223,0.185194527369712,0.376736914009382,0.27338845544205,0,5.09935289981566,6.15786390224095,6.21899882119907,31.5041303944987,0.316335993581135,2.43983360552218,5.61627772273367,4.39085421630384,8.51613998610093,7.01294601201068,12.5633252702511,17.799404054914,79.7132085744526,7.45607175704311,0,0,0,0.388902376688095,0.258319646955462,0,0.352071715937262,1.43224823328345,0.524296722128554,0.724752362478018,0.288030006257865,0.632022241256357,0.405450430580328,0.410843828659309,0.129920822977795,0.358053391334963,0.39736270956253,0.721172697119813,0.295379054349154,1.11063094942962,0.457240839929999,0.604957110821043,1.46186821109629,0.865906574762965,1.40252282617883,3.62768613784338,0,0.179427713218951,0.167884616364078,9.85266929564171,4.692061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| |||
|short_description=p1@Epb4.1l4b | |||
}} | |||
Revision as of 05:15, 14 September 2013
| Short description: | p1@Epb4.1l4b |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Epb4.1l4b_5end |
| Coexpression cluster: | MCL_coexpression_mm9:12 |
| Association with transcript: | 0bp_to_NM_019427, uc008sxy.2, uc008sxz.2_5end |
| EntrezGene: | Epb4.1l4b |
| Link to Zenbu: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 6.85e-08 | 25 |
| intestinal epithelial cell | 8.88e-07 | 9 |
| epithelial cell of alimentary canal | 8.88e-07 | 9 |
| Ontology term | p-value | n |
|---|---|---|
| intestine | 9.63e-17 | 31 |
| gastrointestinal system | 3.23e-12 | 47 |
| mucosa | 1.32e-10 | 15 |
| intestinal mucosa | 1.91e-09 | 13 |
| wall of intestine | 1.91e-09 | 13 |
| gastrointestinal system mucosa | 1.91e-09 | 13 |
| endoderm-derived structure | 1.18e-08 | 118 |
| endoderm | 1.18e-08 | 118 |
| presumptive endoderm | 1.18e-08 | 118 |
| digestive system | 1.69e-08 | 116 |
| digestive tract | 1.69e-08 | 116 |
| primitive gut | 1.69e-08 | 116 |
| subdivision of digestive tract | 9.83e-08 | 114 |
| adult organism | 4.82e-07 | 51 |
| epithelium of mucosa | 8.88e-07 | 9 |
| gastrointestinal system epithelium | 8.88e-07 | 9 |
| intestinal epithelium | 8.88e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
