FFCP PHASE1:Mm9::chr4:138813018..138813038,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=402|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:138813018..138813038,+|id=chr4:138813018..138813038,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!3.88e-24!14;UBERON:0000117!3.88e-24!14;UBERON:0000171!3.88e-24!14;UBERON:0000170!3.88e-24!14;UBERON:0005597!3.88e-24!14;UBERON:0000118!3.88e-24!14;UBERON:0005153!3.92e-19!17;UBERON:0005178!3.92e-19!17;UBERON:0005181!3.92e-19!17;UBERON:0002224!3.92e-19!17;UBERON:0000915!3.92e-19!17;UBERON:0008947!3.92e-19!17;UBERON:0003258!3.92e-19!17;UBERON:0000310!9.50e-11!6;UBERON:0001443!9.50e-11!6;UBERON:0005157!1.50e-10!27|ontology_enrichment_uberon_v019_2=UBERON:0002048,3.43e-56,14;UBERON:0000117,3.43e-56,14;UBERON:0000171,3.43e-56,14;UBERON:0000170,3.43e-56,14;UBERON:0005597,3.43e-56,14;UBERON:0000118,3.43e-56,14;UBERON:0005153,4.81e-46,17;UBERON:0005178,4.81e-46,17;UBERON:0005181,4.81e-46,17;UBERON:0002224,4.81e-46,17;UBERON:0000915,4.81e-46,17;UBERON:0008947,4.81e-46,17;UBERON:0003258,4.81e-46,17;UBERON:0005157,6.17e-39,20;UBERON:0000065,3.01e-18,41;UBERON:0001004,8.92e-18,42;UBERON:0000310,1.70e-15,6;UBERON:0001443,1.70e-15,6;UBERON:0009569,9.86e-11,66;UBERON:0005911,3.41e-10,69;UBERON:0005177,1.08e-08,79;UBERON:0001041,1.46e-08,80;UBERON:0002100,2.02e-07,90|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0.229902104433473,0,0,0,0,0,0,0.431135985865684,0.189106080167819,0.351902248327898,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0.575392274901621,0,0,0,0,0,0,0,0,3.32555742299888,0.189491411770485,1.46668478797823,0.848725428875941,5.39787571063555,8.87783164441623,14.9967493758189,7.61021226645415,2.67979744980525,1.99318220683897,1.2756381492599,1.96635977658886,1.89953480052485,1.44649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63549621259146,0,0.16488625294148,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551530525350042,0.222246727801615,0.824140228955577,0.962757628775446,0,0.50695859978048,1.69763707247469,0.749132059759059,0.640251524048693,0.459483751644906,1.90517476513229,0.927074607558844,0.38581844092741,1.23625770240992,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.581385666529314,0.752875043322645,0.507687647350059,0.548783918618318,0.263069711437843,0.679020569229309,0,0.237270036248348,0.394017929502254,0,0.619747364743864,0.578719832943424,0,1.16965804222704,0.214871054048298,0,0,0|short_description=p@chr4:138813018..138813038,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=402 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:138813018..138813038,+ | |||
|id=chr4:138813018..138813038,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!3.88e-24!14;UBERON:0000117!3.88e-24!14;UBERON:0000171!3.88e-24!14;UBERON:0000170!3.88e-24!14;UBERON:0005597!3.88e-24!14;UBERON:0000118!3.88e-24!14;UBERON:0005153!3.92e-19!17;UBERON:0005178!3.92e-19!17;UBERON:0005181!3.92e-19!17;UBERON:0002224!3.92e-19!17;UBERON:0000915!3.92e-19!17;UBERON:0008947!3.92e-19!17;UBERON:0003258!3.92e-19!17;UBERON:0000310!9.50e-11!6;UBERON:0001443!9.50e-11!6;UBERON:0005157!1.50e-10!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,3.43e-56,14;UBERON:0000117,3.43e-56,14;UBERON:0000171,3.43e-56,14;UBERON:0000170,3.43e-56,14;UBERON:0005597,3.43e-56,14;UBERON:0000118,3.43e-56,14;UBERON:0005153,4.81e-46,17;UBERON:0005178,4.81e-46,17;UBERON:0005181,4.81e-46,17;UBERON:0002224,4.81e-46,17;UBERON:0000915,4.81e-46,17;UBERON:0008947,4.81e-46,17;UBERON:0003258,4.81e-46,17;UBERON:0005157,6.17e-39,20;UBERON:0000065,3.01e-18,41;UBERON:0001004,8.92e-18,42;UBERON:0000310,1.70e-15,6;UBERON:0001443,1.70e-15,6;UBERON:0009569,9.86e-11,66;UBERON:0005911,3.41e-10,69;UBERON:0005177,1.08e-08,79;UBERON:0001041,1.46e-08,80;UBERON:0002100,2.02e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0.229902104433473,0,0,0,0,0,0,0.431135985865684,0.189106080167819,0.351902248327898,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0.575392274901621,0,0,0,0,0,0,0,0,3.32555742299888,0.189491411770485,1.46668478797823,0.848725428875941,5.39787571063555,8.87783164441623,14.9967493758189,7.61021226645415,2.67979744980525,1.99318220683897,1.2756381492599,1.96635977658886,1.89953480052485,1.44649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63549621259146,0,0.16488625294148,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551530525350042,0.222246727801615,0.824140228955577,0.962757628775446,0,0.50695859978048,1.69763707247469,0.749132059759059,0.640251524048693,0.459483751644906,1.90517476513229,0.927074607558844,0.38581844092741,1.23625770240992,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.581385666529314,0.752875043322645,0.507687647350059,0.548783918618318,0.263069711437843,0.679020569229309,0,0.237270036248348,0.394017929502254,0,0.619747364743864,0.578719832943424,0,1.16965804222704,0.214871054048298,0,0,0 | |||
|short_description=p@chr4:138813018..138813038,+ | |||
}} |
Revision as of 04:16, 14 September 2013
Short description: | p@chr4:138813018..138813038, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:138813018..138813038, + |
Coexpression cluster: | MCL_coexpression_mm9:402 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 3.43e-56 | 14 |
respiratory tube | 3.43e-56 | 14 |
respiration organ | 3.43e-56 | 14 |
pair of lungs | 3.43e-56 | 14 |
lung primordium | 3.43e-56 | 14 |
lung bud | 3.43e-56 | 14 |
epithelial bud | 4.81e-46 | 17 |
thoracic cavity element | 4.81e-46 | 17 |
thoracic segment organ | 4.81e-46 | 17 |
thoracic cavity | 4.81e-46 | 17 |
thoracic segment of trunk | 4.81e-46 | 17 |
respiratory primordium | 4.81e-46 | 17 |
endoderm of foregut | 4.81e-46 | 17 |
epithelial fold | 6.17e-39 | 20 |
respiratory tract | 3.01e-18 | 41 |
respiratory system | 8.92e-18 | 42 |
breast | 1.70e-15 | 6 |
chest | 1.70e-15 | 6 |
subdivision of trunk | 9.86e-11 | 66 |
endo-epithelium | 3.41e-10 | 69 |
trunk region element | 1.08e-08 | 79 |
foregut | 1.46e-08 | 80 |
trunk | 2.02e-07 | 90 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.