FFCP PHASE1:Mm9::chr3:88893877..88893930,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=72296|HGNC=|UniProt=Q8BG26,Q3TDG5|association_with_transcript=22bp_to_ENSMUST00000166687,NM_001083808,uc008pxl.1_5end|description=CAGE_peak_2_at_Rusc1_5end|id=chr3:88893877..88893930,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!7.82e-14!51;UBERON:0000160!2.64e-09!43;UBERON:0005409!1.61e-07!59|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.43e-14,51;UBERON:0000160,1.14e-07,31|phase1_expression=2.5623815536767,27.5690572035095,25.9349566452036,18.1478526784098,15.5277676283368,12.9267039372155,11.9142446703718,22.9839515726006,20.695942156295,29.0240012639272,4.79410311031414,5.02564601670619,19.6880839420887,22.2922026168443,6.66219523631325,4.25198061518635,2.79824751251259,12.4607555316504,11.7918412900935,14.429248161133,6.4632900514813,3.97163804803541,4.96279599363977,12.6394014006791,11.2410547722913,26.4146703492909,11.1998119001359,29.3040876452809,11.4014051673824,8.06496415231778,19.5122849376668,8.89042942843484,7.99584223859941,15.8481681015439,3.17736781726402,4.65457007003779,4.08338712524738,12.9744805528441,10.1573594788094,8.37637990358077,14.1175557127443,10.2456822743767,13.1087795318411,6.16894408080329,3.24406179902447,3.30384153891027,14.8654355426127,1.96222640742402,4.61340983742391,3.4997381833371,3.91961980551015,2.87505128729943,22.1473039996212,32.6412963905105,22.8543783416875,5.91696702882678,6.87680255853016,5.67239301505187,1.01158230429799,1.05798195854407,2.53532561402472,2.37191172448392,11.5608323494448,19.7977937801908,28.6771245144423,24.1563239081674,10.7856039786626,9.22123932771731,0.725827286159344,0.945041568321835,0.841299845405528,1.42825492201902,1.54607978666129,0.734944795289724,0.575072826109418,0.919218786610021,5.50579404996943,7.15049093277051,4.45458946443106,0.791317726381163,1.00636407962651,0,9.49222196604695,7.31591393041184,6.72312290217964,2.06240009831567,0.854230084794618,0.745597783301202,3.02904773332736,2.64500460373749,12.1743085254705,11.185510400758,7.47968467078526,8.09554787456726,6.49776417447669,6.72040330646003,9.55022056895913,2.55645483867087,2.59786004602869,3.18005617059306,1.83096445709685,1.28326477414318,0,0,2.59789249213457,3.80039798212648,2.52762222507392,7.07940054258172,13.4647699496529,13.5082346548991,4.3371331691534,8.8294988710521,16.3737003051802,17.0316583824463,10.2302175208063,5.6549966098354,23.4835219347655,12.7247434089522,5.30766331169925,5.3383060482645,4.19598885074748,3.87900202508178,14.9113408974498,5.85561594023094,3.14170060220183,15.5828803677241,6.70964697233154,7.7987355029143,7.75128385145695,5.84183493678809,10.5225138648284,0.376963056338593,7.82209440865244,7.16003280524926,9.3504620051802,6.81413304884582,3.56437773476107,7.58882520721567,9.60346482047964,8.83855794723191,2.86264974517948,2.06911893990126,1.80062129805349,2.71268672104287,1.7009124787832,1.0249097622788,1.49922759295566,4.13925393182425,2.58681591519411,3.78212160335639,6.68614271823006,7.67185063496512,5.83899223373756,9.05455632957633,5.55611768301447,2.38841120182192,7.02213187313235,6.69104558498259,11.0823764764281,1.86413195281952,3.51789089971644,3.24111710629827,3.55117103377815,4.32881309844288,2.77680803197281,2.55787339225449,3.75582761959467,3.50296027101508,3.12663714835613,3.77585167381919,5.83695428730161,8.62579925809461,9.22110484222413,11.0049263383505,9.2527577368216,1.23485534855141,27.755177770639,17.1892868331304,2.98603550749328,2.78684006232526,5.67016829817211,12.5043785266472,17.5678654637448,18.4518857329182,13.2868137232463,12.0230236948528,10.8074139784116,12.7332142106337,13.6474860983384,6.29173586057955,12.5360068927323,15.5330193138406,3.79335801906163,3.31320686568214,4.50830942692322,2.44381593414377,6.20647958936402,4.41855665309007,4.86921335856781,6.7900668070617,6.12295038581362,8.76119863844784,7.70776830426587,3.50374722003798,3.53806191203765,3.14806957338795,2.63718157805054,3.37648023653384,2.5462585178142,3.74004978686054,1.45921704097532,2.74561413188081,1.43768206527355,2.97712758134803,1.87222603868736,3.78868316920668,2.87035861635059,6.27176577772377,17.1820466854942,1.89491411770485,3.25929952884052,2.71592137240301,4.22442446919304,9.71536293162531,15.4728366575909,9.17128144931655,4.25614889086716,8.19419351700467,6.37819074629948,10.1595255123758,10.0157289482219,12.5844680965915,10.5553898757491,11.9659250440116,12.7858710984949,14.9005843004556,5.77982123956051,4.21962071731931,1.96721934452011,13.6334300690361,1.89304931649754,1.95219372148319,3.66219776145758,3.10659437338318,3.7875774594007,3.39691836946599,2.02405350837447,2.92255857911312,2.37172666767914,5.46246237917072,7.38088443082997,5.1639025063504,4.56083486190013,8.41347627159931,29.2039304347918,3.15614827001476,4.53485335447127,8.29862350925952,11.2214719294694,15.0643222492524,11.3708448994017,6.5436071305951,6.06045543254026,12.009396801561,25.3004660579997,8.2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| ||
|EntrezGene=72296 | |||
|HGNC= | |||
|UniProt=Q8BG26,Q3TDG5 | |||
|association_with_transcript=22bp_to_ENSMUST00000166687,NM_001083808,uc008pxl.1_5end | |||
|description=CAGE_peak_2_at_Rusc1_5end | |||
|id=chr3:88893877..88893930,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.82e-14!51;UBERON:0000160!2.64e-09!43;UBERON:0005409!1.61e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.43e-14,51;UBERON:0000160,1.14e-07,31 | |||
|phase1_expression=2.5623815536767,27.5690572035095,25.9349566452036,18.1478526784098,15.5277676283368,12.9267039372155,11.9142446703718,22.9839515726006,20.695942156295,29.0240012639272,4.79410311031414,5.02564601670619,19.6880839420887,22.2922026168443,6.66219523631325,4.25198061518635,2.79824751251259,12.4607555316504,11.7918412900935,14.429248161133,6.4632900514813,3.97163804803541,4.96279599363977,12.6394014006791,11.2410547722913,26.4146703492909,11.1998119001359,29.3040876452809,11.4014051673824,8.06496415231778,19.5122849376668,8.89042942843484,7.99584223859941,15.8481681015439,3.17736781726402,4.65457007003779,4.08338712524738,12.9744805528441,10.1573594788094,8.37637990358077,14.1175557127443,10.2456822743767,13.1087795318411,6.16894408080329,3.24406179902447,3.30384153891027,14.8654355426127,1.96222640742402,4.61340983742391,3.4997381833371,3.91961980551015,2.87505128729943,22.1473039996212,32.6412963905105,22.8543783416875,5.91696702882678,6.87680255853016,5.67239301505187,1.01158230429799,1.05798195854407,2.53532561402472,2.37191172448392,11.5608323494448,19.7977937801908,28.6771245144423,24.1563239081674,10.7856039786626,9.22123932771731,0.725827286159344,0.945041568321835,0.841299845405528,1.42825492201902,1.54607978666129,0.734944795289724,0.575072826109418,0.919218786610021,5.50579404996943,7.15049093277051,4.45458946443106,0.791317726381163,1.00636407962651,0,9.49222196604695,7.31591393041184,6.72312290217964,2.06240009831567,0.854230084794618,0.745597783301202,3.02904773332736,2.64500460373749,12.1743085254705,11.185510400758,7.47968467078526,8.09554787456726,6.49776417447669,6.72040330646003,9.55022056895913,2.55645483867087,2.59786004602869,3.18005617059306,1.83096445709685,1.28326477414318,0,0,2.59789249213457,3.80039798212648,2.52762222507392,7.07940054258172,13.4647699496529,13.5082346548991,4.3371331691534,8.8294988710521,16.3737003051802,17.0316583824463,10.2302175208063,5.6549966098354,23.4835219347655,12.7247434089522,5.30766331169925,5.3383060482645,4.19598885074748,3.87900202508178,14.9113408974498,5.85561594023094,3.14170060220183,15.5828803677241,6.70964697233154,7.7987355029143,7.75128385145695,5.84183493678809,10.5225138648284,0.376963056338593,7.82209440865244,7.16003280524926,9.3504620051802,6.81413304884582,3.56437773476107,7.58882520721567,9.60346482047964,8.83855794723191,2.86264974517948,2.06911893990126,1.80062129805349,2.71268672104287,1.7009124787832,1.0249097622788,1.49922759295566,4.13925393182425,2.58681591519411,3.78212160335639,6.68614271823006,7.67185063496512,5.83899223373756,9.05455632957633,5.55611768301447,2.38841120182192,7.02213187313235,6.69104558498259,11.0823764764281,1.86413195281952,3.51789089971644,3.24111710629827,3.55117103377815,4.32881309844288,2.77680803197281,2.55787339225449,3.75582761959467,3.50296027101508,3.12663714835613,3.77585167381919,5.83695428730161,8.62579925809461,9.22110484222413,11.0049263383505,9.2527577368216,1.23485534855141,27.755177770639,17.1892868331304,2.98603550749328,2.78684006232526,5.67016829817211,12.5043785266472,17.5678654637448,18.4518857329182,13.2868137232463,12.0230236948528,10.8074139784116,12.7332142106337,13.6474860983384,6.29173586057955,12.5360068927323,15.5330193138406,3.79335801906163,3.31320686568214,4.50830942692322,2.44381593414377,6.20647958936402,4.41855665309007,4.86921335856781,6.7900668070617,6.12295038581362,8.76119863844784,7.70776830426587,3.50374722003798,3.53806191203765,3.14806957338795,2.63718157805054,3.37648023653384,2.5462585178142,3.74004978686054,1.45921704097532,2.74561413188081,1.43768206527355,2.97712758134803,1.87222603868736,3.78868316920668,2.87035861635059,6.27176577772377,17.1820466854942,1.89491411770485,3.25929952884052,2.71592137240301,4.22442446919304,9.71536293162531,15.4728366575909,9.17128144931655,4.25614889086716,8.19419351700467,6.37819074629948,10.1595255123758,10.0157289482219,12.5844680965915,10.5553898757491,11.9659250440116,12.7858710984949,14.9005843004556,5.77982123956051,4.21962071731931,1.96721934452011,13.6334300690361,1.89304931649754,1.95219372148319,3.66219776145758,3.10659437338318,3.7875774594007,3.39691836946599,2.02405350837447,2.92255857911312,2.37172666767914,5.46246237917072,7.38088443082997,5.1639025063504,4.56083486190013,8.41347627159931,29.2039304347918,3.15614827001476,4.53485335447127,8.29862350925952,11.2214719294694,15.0643222492524,11.3708448994017,6.5436071305951,6.06045543254026,12.009396801561,25.3004660579997,8.25084345985495,21.4476951624886,3.24109969256358,2.97524972700335,4.07240366560025,5.32020700926821,5.52943334566419,4.77192159746151,7.30715877875038,26.5179030111993,14.4045808187398,19.1859706307817,9.0687439117814,4.03661066739764,4.70440814439616,7.16234064018819,6.89391778929257,11.9507143018239,4.45020724825223,5.63873906632914,3.92135049130123,3.33350149265481,3.57900068308913,3.2806614653046,5.0331198105435,7.9889862097112,12.1757763521582,8.56839837587428,24.821436068393,3.79603192297362,4.06638934253697,4.536224314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| |||
|short_description=p2@Rusc1 | |||
}} | |||
Revision as of 02:49, 14 September 2013
| Short description: | p2@Rusc1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Rusc1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 22bp_to_ENSMUST00000166687, NM_001083808, uc008pxl.1_5end |
| EntrezGene: | Rusc1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 7.43e-14 | 51 |
| intestine | 1.14e-07 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
