FFCP PHASE1:Mm9::chr3:79432582..79432667,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=66841|HGNC=|MCL_coexpression_id=201|UniProt=Q6PF96|association_with_transcript=0bp_to_ENSMUST00000120992,ENSMUST00000126809,ENSMUST00000135058,ENSMUST00000149511_5end|description=CAGE_peak_1_at_Etfdh_5end|id=chr3:79432582..79432667,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!1.24e-13!47;UBERON:0009854!5.20e-08!23;UBERON:0009856!5.20e-08!23;UBERON:0002107!6.54e-08!22;UBERON:0007499!6.54e-08!22;UBERON:0006925!6.54e-08!22;UBERON:0009497!6.54e-08!22;UBERON:0000015!6.54e-08!22;UBERON:0002423!6.54e-08!22;UBERON:0006235!6.54e-08!22;UBERON:0008835!6.54e-08!22;UBERON:0003894!6.54e-08!22;UBERON:0004161!6.54e-08!22;UBERON:0008836!6.54e-08!22;UBERON:0002365!8.12e-08!25;UBERON:0002330!8.12e-08!25;UBERON:0007100!8.38e-08!18;UBERON:0000948!8.38e-08!18;UBERON:0005498!8.38e-08!18;UBERON:0004140!8.38e-08!18;UBERON:0009881!8.38e-08!18;UBERON:0004141!8.38e-08!18;UBERON:0003084!8.38e-08!18;UBERON:0007005!8.38e-08!18;UBERON:0004139!8.38e-08!18;UBERON:0004291!8.38e-08!18;UBERON:0004535!2.72e-07!23;UBERON:0001009!2.72e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.24e-13,47;UBERON:0009854,5.20e-08,23;UBERON:0009856,5.20e-08,23;UBERON:0002107,6.54e-08,22;UBERON:0007499,6.54e-08,22;UBERON:0006925,6.54e-08,22;UBERON:0009497,6.54e-08,22;UBERON:0000015,6.54e-08,22;UBERON:0002423,6.54e-08,22;UBERON:0006235,6.54e-08,22;UBERON:0008835,6.54e-08,22;UBERON:0003894,6.54e-08,22;UBERON:0004161,6.54e-08,22;UBERON:0008836,6.54e-08,22;UBERON:0002365,8.12e-08,25;UBERON:0002330,8.12e-08,25;UBERON:0007100,8.38e-08,18;UBERON:0000948,8.38e-08,18;UBERON:0005498,8.38e-08,18;UBERON:0004140,8.38e-08,18;UBERON:0009881,8.38e-08,18;UBERON:0004141,8.38e-08,18;UBERON:0003084,8.38e-08,18;UBERON:0007005,8.38e-08,18;UBERON:0004139,8.38e-08,18;UBERON:0004291,8.38e-08,18;UBERON:0004535,2.72e-07,23;UBERON:0001009,2.72e-07,23;UBERON:0000160,2.85e-07,31;UBERON:0003104,6.93e-07,61;UBERON:0009142,6.93e-07,61|phase1_expression=23.5418805244047,101.551843623054,109.654816692878,90.1343349694354,75.1343594919521,67.8232258524035,65.1779267261517,19.6267451631196,23.230139155025,24.3427107374873,9.58820622062828,6.38177271962691,17.462474452983,19.6695905442744,19.6534759471241,23.28465574983,26.5833513688696,12.3030244489713,15.76815986466,12.3072999021429,31.636103936198,21.8440092641948,25.5975793356157,94.8755067164902,88.5519824919276,109.104073181854,95.1984011511555,106.227317714143,103.942810442637,79.893551133898,74.944912601493,8.89042942843484,6.1506478758457,0,49.6824785972192,51.8652093518496,37.1588228397512,25.1118978442145,22.6587249911902,29.8408534065065,22.3527965451785,19.8083190637949,17.9638830621527,32.4813790376989,28.182786879025,28.6332933372223,4.69434806608824,11.7733584445441,10.9843091367236,20.609569301874,12.5987779462826,15.8127820801469,14.2615215149076,14.5072428402269,22.1821907434026,25.2114247315228,36.3897468722221,39.7067511053631,8.29497489524351,9.52183762689659,8.87363964908651,8.80995783379743,8.00365316500025,7.64914759689189,7.9109309005358,5.6838409195688,5.39280198933128,7.30014780110954,8.29516898467821,7.2903206699113,7.99234853135252,15.7108041422092,14.5773237028065,9.92175473641128,6.3258010872036,5.51531271966013,14.3150645299205,21.9622221506523,24.577045320999,8.70449499019279,10.2466160834699,9.37644067002168,22.3346399201105,20.8222165711722,24.7533161398432,23.5702868378934,22.6370972470574,15.2847545576746,18.7043697532965,29.1706222012192,43.18980881655,157.457569487594,61.1974200336975,252.581093686498,237.818168785847,202.508152967996,140.584864551884,21.4742206448353,17.4056623083922,21.9070536196411,25.9151892389092,7.69958864485907,22.9324715735981,7.11066703153331,20.3501578550541,17.2284708523067,19.7154533555765,165.22407395348,28.4831672011889,74.0726273933476,32.6152414320335,63.9377504455497,68.4928026850494,66.6194071242592,69.4949259172015,126.043591103664,50.1805784500779,374.512334422571,55.7304647728421,71.6627145267023,70.2276028704051,39.274895503953,63.3731988141615,19.0307518057506,26.3902850584953,68.4624907959025,17.3731930533584,22.7963037777495,23.3809217814439,25.1648274200102,24.2475319493872,14.827213549318,17.7300806596122,20.2015211290961,15.3763152974074,22.8760180925538,29.2278974250408,45.0353233608537,30.0740082536073,85.6498353457949,24.2024023910629,20.4612872945791,19.9868964083938,22.3043130396858,24.1529571987214,29.4661556655155,21.5513966487376,52.7754876307592,12.5029435901048,18.1541836961106,16.7153567955751,21.2619860454748,26.4144886764318,26.4671646556847,25.9285491874009,27.6657630877706,19.6619692447706,20.0731367549478,26.1430419443945,74.7724038853162,70.3578179943289,79.2273070428465,89.2527653156243,114.713547108736,128.195970809411,164.634032883289,161.232314241171,213.330280504819,333.233696074798,488.234038171229,495.411495134724,596.934548657632,399.361659714421,463.012144723283,19.3466752678997,17.1850702673405,108.377360818686,87.2686869989696,20.4756720513825,16.953277045812,28.2219740295384,55.4629692714192,67.3805472849957,91.498526160141,82.0935276472005,123.19481813356,113.603514377722,119.37388322469,95.1424745141306,84.4890244134968,88.8327384984993,104.947451005052,17.2597789867304,23.0781995471652,38.3206301288473,43.9886868145879,46.7425494073978,51.4796917994938,79.9942194621855,111.29805157662,128.110961918562,153.382674754798,229.75078599254,21.8567088488083,31.0563212278861,33.5044547453432,40.1663040349236,43.8942430749399,70.2767350916719,94.0766369464151,229.907751567,240.790359365947,227.15376631322,322.646201628592,285.826508572937,299.305970367327,247.747828073761,293.808104510291,27.3434721446575,23.3074436477696,23.7928865605358,21.0483906361233,18.3058393665032,30.4861388544105,30.9456733151818,39.2218632194176,33.5762856946187,39.4207147574819,34.9205943359897,37.524699069904,39.1994908835583,37.030158996867,28.6503439484617,22.3001330365671,32.4564420192564,53.5317287831181,24.5642402681322,27.7791697223522,18.3607138821876,158.551742284346,34.0748876969557,35.5299257309941,40.9304455692318,32.2607877235945,30.0778210011232,26.6091938941502,39.2666380624648,34.4861912335348,39.1334900167058,22.8138134659483,51.808131101018,28.1343653794263,24.4330439030364,33.8188752093698,31.8588332015911,22.5785991624133,23.8835610002153,33.0058889572822,33.0738120026465,43.0409207121498,56.3373679106722,36.3533729477506,46.7011565683985,34.4480066150039,35.8423269154996,40.2228618667929,55.8320953436212,25.2085531643834,27.2946822781612,32.579229324802,51.0739872889748,43.8787291301094,34.8843923676496,24.9661258273971,33.0887108369832,42.1545821019002,30.8739757276947,34.9558856235938,69.4297034792394,48.0694011677402,44.4065119691668,46.1235928283622,106.099024533266,23.3635880533242,17.9414424837745,19.8131393244694,19.26023084645,32.2110061478022,26.2452917224368,21.5051482814131,30.596117398894,32.6086883914123,33.9971935558883,81.1470025312846,18.3474876277058,25.4149333908561,31.4295541791442,38.2631581706478,52.1886527353364,64.0605645327898,94.1422860711576,83.2383895509214,80.102053494328,62.1339313086926,15.7834022831573,27.2120113800041,33.0916980914195,34.2234091485524,36.1647505737647,43.0838120001484,42.2486059124714,36.58743214115,30.4092098834561,22.4673232368186,32.5473907071388,33.4971787865869,17.8398189455344,27.4238255630089,28.7125018780927,22.7363903497701,31.9876981197836,27.164171591513,32.0486273968833,37.3575864808146,34.3692698014049,33.7767720208416,27.1907487263909,25.399926193047,36.6993472850126,149.188592418809,19.9787358036658,9.41995494399495,18.2994231836845,28.5920599167642,37.7241775656876,48.9014836793598,36.6569928225203,33.6053309703693,19.7663144915973,20.2543104063158,25.2074025913335,20.7942350635862,16.4419804744954,18.1294535373528,18.9006300064906,13.9599572999508,15.406841905463,15.0150490408028,15.3605274424581,23.1434426572598,21.683167930775,28.4434858969904,23.476674214334,55.5207395519043,83.3425229256057,83.0321280672744,86.3272673801983,84.4008687291084,83.6481689637791,81.2979531373988,76.7860361253036,77.406409257487,78.6865924691902,85.2565707396702,80.0760692278951,80.6360541538287,82.4171801606613,81.8425995947249,77.4884510391039,77.5569272916305,73.6767826937222,73.2545939826936,78.0166763643091,84.0223056364348,79.5736681996561,82.6038893914827,71.5687679967692,72.948495315506,74.9773314544781,78.7050814180752,92.8954467995195,81.6517153050041,57.8719832943424,22.982573170291,84.215379040347,146.327187806891,165.655695571618,171.840715494103,175.9876872359|short_description=p1@Etfdh}} | ||
|EntrezGene=66841 | |||
|HGNC= | |||
|MCL_coexpression_id=201 | |||
|UniProt=Q6PF96 | |||
|association_with_transcript=0bp_to_ENSMUST00000120992,ENSMUST00000126809,ENSMUST00000135058,ENSMUST00000149511_5end | |||
|description=CAGE_peak_1_at_Etfdh_5end | |||
|id=chr3:79432582..79432667,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.24e-13!47;UBERON:0009854!5.20e-08!23;UBERON:0009856!5.20e-08!23;UBERON:0002107!6.54e-08!22;UBERON:0007499!6.54e-08!22;UBERON:0006925!6.54e-08!22;UBERON:0009497!6.54e-08!22;UBERON:0000015!6.54e-08!22;UBERON:0002423!6.54e-08!22;UBERON:0006235!6.54e-08!22;UBERON:0008835!6.54e-08!22;UBERON:0003894!6.54e-08!22;UBERON:0004161!6.54e-08!22;UBERON:0008836!6.54e-08!22;UBERON:0002365!8.12e-08!25;UBERON:0002330!8.12e-08!25;UBERON:0007100!8.38e-08!18;UBERON:0000948!8.38e-08!18;UBERON:0005498!8.38e-08!18;UBERON:0004140!8.38e-08!18;UBERON:0009881!8.38e-08!18;UBERON:0004141!8.38e-08!18;UBERON:0003084!8.38e-08!18;UBERON:0007005!8.38e-08!18;UBERON:0004139!8.38e-08!18;UBERON:0004291!8.38e-08!18;UBERON:0004535!2.72e-07!23;UBERON:0001009!2.72e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.24e-13,47;UBERON:0009854,5.20e-08,23;UBERON:0009856,5.20e-08,23;UBERON:0002107,6.54e-08,22;UBERON:0007499,6.54e-08,22;UBERON:0006925,6.54e-08,22;UBERON:0009497,6.54e-08,22;UBERON:0000015,6.54e-08,22;UBERON:0002423,6.54e-08,22;UBERON:0006235,6.54e-08,22;UBERON:0008835,6.54e-08,22;UBERON:0003894,6.54e-08,22;UBERON:0004161,6.54e-08,22;UBERON:0008836,6.54e-08,22;UBERON:0002365,8.12e-08,25;UBERON:0002330,8.12e-08,25;UBERON:0007100,8.38e-08,18;UBERON:0000948,8.38e-08,18;UBERON:0005498,8.38e-08,18;UBERON:0004140,8.38e-08,18;UBERON:0009881,8.38e-08,18;UBERON:0004141,8.38e-08,18;UBERON:0003084,8.38e-08,18;UBERON:0007005,8.38e-08,18;UBERON:0004139,8.38e-08,18;UBERON:0004291,8.38e-08,18;UBERON:0004535,2.72e-07,23;UBERON:0001009,2.72e-07,23;UBERON:0000160,2.85e-07,31;UBERON:0003104,6.93e-07,61;UBERON:0009142,6.93e-07,61 | |||
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| |||
|short_description=p1@Etfdh | |||
}} |
Revision as of 02:33, 14 September 2013
Short description: | p1@Etfdh |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Etfdh_5end |
Coexpression cluster: | MCL_coexpression_mm9:201 |
Association with transcript: | 0bp_to_ENSMUST00000120992, ENSMUST00000126809, ENSMUST00000135058, ENSMUST00000149511_5end |
EntrezGene: | Etfdh |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial tube | 1.24e-13 | 47 |
digestive tract diverticulum | 5.20e-08 | 23 |
sac | 5.20e-08 | 23 |
liver | 6.54e-08 | 22 |
epithelial sac | 6.54e-08 | 22 |
digestive gland | 6.54e-08 | 22 |
epithelium of foregut-midgut junction | 6.54e-08 | 22 |
anatomical boundary | 6.54e-08 | 22 |
hepatobiliary system | 6.54e-08 | 22 |
foregut-midgut junction | 6.54e-08 | 22 |
hepatic diverticulum | 6.54e-08 | 22 |
liver primordium | 6.54e-08 | 22 |
septum transversum | 6.54e-08 | 22 |
liver bud | 6.54e-08 | 22 |
exocrine gland | 8.12e-08 | 25 |
exocrine system | 8.12e-08 | 25 |
primary circulatory organ | 8.38e-08 | 18 |
heart | 8.38e-08 | 18 |
primitive heart tube | 8.38e-08 | 18 |
primary heart field | 8.38e-08 | 18 |
anterior lateral plate mesoderm | 8.38e-08 | 18 |
heart tube | 8.38e-08 | 18 |
heart primordium | 8.38e-08 | 18 |
cardiac mesoderm | 8.38e-08 | 18 |
cardiogenic plate | 8.38e-08 | 18 |
heart rudiment | 8.38e-08 | 18 |
cardiovascular system | 2.72e-07 | 23 |
circulatory system | 2.72e-07 | 23 |
intestine | 2.85e-07 | 31 |
mesenchyme | 6.93e-07 | 61 |
entire embryonic mesenchyme | 6.93e-07 | 61 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.