FFCP PHASE1:Hg19::chr7:94059923..94059935,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1208|description=CAGE_peak_at_chr7:94059923..94059935,+|id=chr7:94059923..94059935,+|ontology_enrichment_celltype=CL:0000055!1.31e-36!180;CL:0000057!1.25e-22!75;CL:0000680!5.06e-19!57;CL:0000056!5.06e-19!57;CL:0000355!5.06e-19!57;CL:0000187!6.01e-18!54;CL:0000183!2.61e-17!59;CL:0000393!1.61e-14!60;CL:0000211!1.61e-14!60;CL:0000192!1.76e-14!42;CL:0000514!1.76e-14!42;CL:0000048!6.00e-13!430;CL:0000723!4.39e-12!436;CL:0000034!2.90e-11!444;CL:0002620!5.83e-11!23;CL:0000359!1.48e-10!32;CL:0002494!1.63e-08!16;CL:0002334!9.52e-07!12|ontology_enrichment_celltype_v019=CL:0002620;2.53e-11;23!CL:0000134;1.18e-09;55!CL:0000723;1.40e-08;61!CL:0000048;1.42e-08;58!CL:0000187;5.59e-08;55!CL:0000057;1.16e-07;73!CL:0002320;1.49e-07;188!CL:0000499;9.55e-07;28|ontology_enrichment_celltype_v019_2=CL:0000057,2.84e-19,76;CL:0000048,2.83e-16,427;CL:0000723,1.33e-15,433;CL:0000034,9.62e-15,441;CL:0000187,1.72e-11,55;CL:0002620,1.84e-11,23;CL:0000680,1.90e-11,58;CL:0000056,1.90e-11,58;CL:0000355,1.90e-11,58;CL:0000393,1.37e-09,61;CL:0000211,1.37e-09,61;CL:0002320,1.74e-08,361;CL:0000134,3.30e-08,354;CL:0000192,7.22e-08,43;CL:0000514,7.22e-08,43|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;5.22e-08;5!DOID:450;5.22e-08;5!DOID:66;5.22e-08;5!DOID:423;5.22e-08;5!DOID:0080000;5.22e-08;5!DOID:11722;5.22e-08;5|ontology_enrichment_disease_v019_2=DOID:17,4.20e-08,5;DOID:450,4.20e-08,5;DOID:66,4.20e-08,5;DOID:423,4.20e-08,5;DOID:0080000,4.20e-08,5;DOID:11722,4.20e-08,5|ontology_enrichment_uberon=UBERON:0004290!3.60e-19!70;UBERON:0001134!4.00e-19!61;UBERON:0002036!4.00e-19!61;UBERON:0003082!4.00e-19!61;UBERON:0002385!8.52e-19!63;UBERON:0001015!8.52e-19!63;UBERON:0000383!8.52e-19!63;UBERON:0000914!1.15e-18!83;UBERON:0002329!1.15e-18!83;UBERON:0003077!1.15e-18!83;UBERON:0003059!1.15e-18!83;UBERON:0007282!1.15e-18!83;UBERON:0009618!1.15e-18!83;UBERON:0007285!1.15e-18!83;UBERON:0000486!3.01e-15!82;UBERON:0004872!1.31e-09!84;UBERON:0005256!4.65e-09!143;UBERON:0002199!1.37e-08!45;UBERON:0002416!1.37e-08!45;UBERON:0000948!6.01e-08!24;UBERON:0005498!6.01e-08!24;UBERON:0004140!6.01e-08!24;UBERON:0009881!6.01e-08!24;UBERON:0004141!6.01e-08!24;UBERON:0003084!6.01e-08!24;UBERON:0007005!6.01e-08!24;UBERON:0004139!6.01e-08!24;UBERON:0004291!6.01e-08!24;UBERON:0002097!9.21e-08!40;UBERON:0004535!6.27e-07!110;UBERON:0002100!7.05e-07!216;UBERON:0001637!7.44e-07!42;UBERON:0003509!7.44e-07!42;UBERON:0004572!7.44e-07!42|ontology_enrichment_uberon_v019=UBERON:0003688;3.91e-09;6!UBERON:0002358;3.91e-09;6!UBERON:0003684;3.91e-09;6!UBERON:0001178;3.91e-09;6!UBERON:0002097;9.88e-08;41!UBERON:0004457;1.16e-07;9!UBERON:0000042;1.16e-07;9!UBERON:0002384;1.22e-07;198!UBERON:0002199;4.76e-07;46!UBERON:0002416;4.76e-07;46!UBERON:0001013;9.46e-07;14|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.76e-12,62;UBERON:0002036,2.76e-12,62;UBERON:0003082,2.76e-12,62;UBERON:0007524,1.18e-11,73;UBERON:0002385,1.27e-11,64;UBERON:0001015,1.27e-11,64;UBERON:0000383,1.27e-11,64;UBERON:0002329,3.47e-11,71;UBERON:0003059,3.47e-11,71;UBERON:0007282,3.47e-11,71;UBERON:0004290,3.47e-11,71;UBERON:0009618,3.47e-11,71;UBERON:0003077,6.66e-11,72;UBERON:0007285,6.66e-11,72;UBERON:0002097,6.52e-10,41;UBERON:0002384,1.84e-09,371;UBERON:0007503,2.25e-09,78;UBERON:0002199,3.55e-09,46;UBERON:0002416,3.55e-09,46;UBERON:0000486,4.27e-09,83;UBERON:0003688,5.71e-09,6;UBERON:0002358,5.71e-09,6;UBERON:0003684,5.71e-09,6;UBERON:0001178,5.71e-09,6;UBERON:0001013,9.32e-07,14|phase1_expression=1.81678379270557,1.2846031433459,4.08767771878316,5.00366491765652,4.46961094427288,3.48935409640147,2.53299878168311,0,0.261185628199839,0.245733936501509,0,0,0,0.123766352960047,0.331397375727916,0.672325146451775,0.602694528023977,2.92124036154949,0.487932798790507,1.72369481307503,0.408001382488506,0,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,2.68280343881454,1.79007586580942,65.4204865816065,5.0133791063589,1.44846518960824,1.5905718941022,3.40644409211845,0.472674085820339,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95760732373446,2.15271869829786,2.1185468930115,20.9390733146634,0.709336764396714,2.24271040056923,5.33744978648525,0.24666754841716,0.933633106199299,0.942974704487816,0.653847612453835,10.2923050798553,1.72852777344,0.234321431833797,0,0,0.298897361103602,0.469737994575059,0.323745888736263,0.140450806702248,0.408308342509787,0.368502951935304,0,2.37600571456411,4.45080472701402,0.910161361938026,0,0.168336113954066,0,0,1.75591048352335,1.5324389789951,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9.38563769613817,0.488965776731466,1.62758471326295,0,0.201273793591026,0|short_description=p@chr7:94059923..94059935,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1208 | |||
|description=CAGE_peak_at_chr7:94059923..94059935,+ | |||
|id=chr7:94059923..94059935,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.31e-36!180;CL:0000057!1.25e-22!75;CL:0000680!5.06e-19!57;CL:0000056!5.06e-19!57;CL:0000355!5.06e-19!57;CL:0000187!6.01e-18!54;CL:0000183!2.61e-17!59;CL:0000393!1.61e-14!60;CL:0000211!1.61e-14!60;CL:0000192!1.76e-14!42;CL:0000514!1.76e-14!42;CL:0000048!6.00e-13!430;CL:0000723!4.39e-12!436;CL:0000034!2.90e-11!444;CL:0002620!5.83e-11!23;CL:0000359!1.48e-10!32;CL:0002494!1.63e-08!16;CL:0002334!9.52e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.53e-11;23!CL:0000134;1.18e-09;55!CL:0000723;1.40e-08;61!CL:0000048;1.42e-08;58!CL:0000187;5.59e-08;55!CL:0000057;1.16e-07;73!CL:0002320;1.49e-07;188!CL:0000499;9.55e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.84e-19,76;CL:0000048,2.83e-16,427;CL:0000723,1.33e-15,433;CL:0000034,9.62e-15,441;CL:0000187,1.72e-11,55;CL:0002620,1.84e-11,23;CL:0000680,1.90e-11,58;CL:0000056,1.90e-11,58;CL:0000355,1.90e-11,58;CL:0000393,1.37e-09,61;CL:0000211,1.37e-09,61;CL:0002320,1.74e-08,361;CL:0000134,3.30e-08,354;CL:0000192,7.22e-08,43;CL:0000514,7.22e-08,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;5.22e-08;5!DOID:450;5.22e-08;5!DOID:66;5.22e-08;5!DOID:423;5.22e-08;5!DOID:0080000;5.22e-08;5!DOID:11722;5.22e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.20e-08,5;DOID:450,4.20e-08,5;DOID:66,4.20e-08,5;DOID:423,4.20e-08,5;DOID:0080000,4.20e-08,5;DOID:11722,4.20e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0004290!3.60e-19!70;UBERON:0001134!4.00e-19!61;UBERON:0002036!4.00e-19!61;UBERON:0003082!4.00e-19!61;UBERON:0002385!8.52e-19!63;UBERON:0001015!8.52e-19!63;UBERON:0000383!8.52e-19!63;UBERON:0000914!1.15e-18!83;UBERON:0002329!1.15e-18!83;UBERON:0003077!1.15e-18!83;UBERON:0003059!1.15e-18!83;UBERON:0007282!1.15e-18!83;UBERON:0009618!1.15e-18!83;UBERON:0007285!1.15e-18!83;UBERON:0000486!3.01e-15!82;UBERON:0004872!1.31e-09!84;UBERON:0005256!4.65e-09!143;UBERON:0002199!1.37e-08!45;UBERON:0002416!1.37e-08!45;UBERON:0000948!6.01e-08!24;UBERON:0005498!6.01e-08!24;UBERON:0004140!6.01e-08!24;UBERON:0009881!6.01e-08!24;UBERON:0004141!6.01e-08!24;UBERON:0003084!6.01e-08!24;UBERON:0007005!6.01e-08!24;UBERON:0004139!6.01e-08!24;UBERON:0004291!6.01e-08!24;UBERON:0002097!9.21e-08!40;UBERON:0004535!6.27e-07!110;UBERON:0002100!7.05e-07!216;UBERON:0001637!7.44e-07!42;UBERON:0003509!7.44e-07!42;UBERON:0004572!7.44e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.91e-09;6!UBERON:0002358;3.91e-09;6!UBERON:0003684;3.91e-09;6!UBERON:0001178;3.91e-09;6!UBERON:0002097;9.88e-08;41!UBERON:0004457;1.16e-07;9!UBERON:0000042;1.16e-07;9!UBERON:0002384;1.22e-07;198!UBERON:0002199;4.76e-07;46!UBERON:0002416;4.76e-07;46!UBERON:0001013;9.46e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.76e-12,62;UBERON:0002036,2.76e-12,62;UBERON:0003082,2.76e-12,62;UBERON:0007524,1.18e-11,73;UBERON:0002385,1.27e-11,64;UBERON:0001015,1.27e-11,64;UBERON:0000383,1.27e-11,64;UBERON:0002329,3.47e-11,71;UBERON:0003059,3.47e-11,71;UBERON:0007282,3.47e-11,71;UBERON:0004290,3.47e-11,71;UBERON:0009618,3.47e-11,71;UBERON:0003077,6.66e-11,72;UBERON:0007285,6.66e-11,72;UBERON:0002097,6.52e-10,41;UBERON:0002384,1.84e-09,371;UBERON:0007503,2.25e-09,78;UBERON:0002199,3.55e-09,46;UBERON:0002416,3.55e-09,46;UBERON:0000486,4.27e-09,83;UBERON:0003688,5.71e-09,6;UBERON:0002358,5.71e-09,6;UBERON:0003684,5.71e-09,6;UBERON:0001178,5.71e-09,6;UBERON:0001013,9.32e-07,14 | |||
|phase1_expression=1.81678379270557,1.2846031433459,4.08767771878316,5.00366491765652,4.46961094427288,3.48935409640147,2.53299878168311,0,0.261185628199839,0.245733936501509,0,0,0,0.123766352960047,0.331397375727916,0.672325146451775,0.602694528023977,2.92124036154949,0.487932798790507,1.72369481307503,0.408001382488506,0,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,2.68280343881454,1.79007586580942,65.4204865816065,5.0133791063589,1.44846518960824,1.5905718941022,3.40644409211845,0.472674085820339,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95760732373446,2.15271869829786,2.1185468930115,20.9390733146634,0.709336764396714,2.24271040056923,5.33744978648525,0.24666754841716,0.933633106199299,0.942974704487816,0.653847612453835,10.2923050798553,1.72852777344,0.234321431833797,0,0,0.298897361103602,0.469737994575059,0.323745888736263,0.140450806702248,0.408308342509787,0.368502951935304,0,2.37600571456411,4.45080472701402,0.910161361938026,0,0.168336113954066,0,0,1.75591048352335,1.5324389789951,0.901428353439581,1.13432183160021,12.0191055911538,5.33893472046419,6.35795703478686,20.106103437655,1.75189299705346,12.6243864622358,4.65292140828975,6.24472429292685,2.92311015483596,11.107086066741,8.28449087780694,2.42469085228218,19.1705179958972,1.61203357164224,1.69560592310488,0,0,0,0,0,0,0.10366105501537,0,0,1.56449532329816,1.28648187638577,0,1.39310378409594,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,3.2925920906512,2.94017422771084,0,0,0,0,0,0.686271241194102,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0.336393253036082,0.87192013766656,0.1466765716419,3.10252117818667,0,1.690605505112,1.32969058292435,1.04007436911366,0.771622122786426,1.41849132023278,0.266422179016099,3.14551586047925,3.7983512377401,0,0.977208552881205,1.42156779497018,1.58390374586686,0.301439377059586,0.871533458600294,0.099972991182057,0,0,0,1.19812427745791,1.14861935834114,0,1.88215698667853,0.205476322550383,0.716243852959582,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0.271265023699736,10.1905722150095,7.31558854068363,5.04647728108591,4.4513737697231,6.3198680942821,0,0,1.99267679560631,1.84369168541703,1.04260337361699,3.72022199179207,1.71571711905428,0,0,0,0,1.66435439510497,0.604780586659361,3.47350930946288,2.91577749247319,2.24528075546459,10.3792710897118,3.07024349440022,2.0911009748669,4.45254199334973,0.308419387605311,0.887808626565635,0.739144404124282,0,0.697262270759755,0,0,0,0.803701137152247,0.728364672026868,1.44236856455367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.247528499761764,0.574265537996172,0,0,0,1.3864375540318,1.07452572308291,0.275673144969061,1.71872391789238,1.16013355131383,0.255679882248303,1.86967274858148,0,0,0,0,2.32422774648643,28.018298867927,0,4.00443654228915,1.06461206063404,2.60979897622522,1.8532421910392,0.715624433709956,2.232950216158,2.21465597303108,0.762520775695299,1.27948895655667,0.42793898803392,0.95460974377781,0,4.31693898199955,1.92175920815238,0.589062011728432,3.23491970517306,0,0.842516912477962,0,0.243713489631284,1.05650146756755,4.7774968992795,1.97967604735198,0,2.75682671773062,0,0.438450885253763,1.73632660280006,1.31178950409327,3.04365565444056,0.92947049429925,0.563391205064483,0.860468113224309,0.88424136911809,1.78335525740625,0.709522128141196,0.633322905892992,3.95153871551882,0.75894634753143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0.593929361665277,0,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0,4.97663340258892,0,0,0,0.0986434056369336,0,4.44547960578548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07730361905316,0,0,0,0,0.31900115973192,0.824378340616761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,6.42062117839031,0,0,0,0,0.394584402849391,1.20990716048664,0.30607276163049,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,2.23581842213102,0,0,0,0.0969890164884194,0,2.25980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0.543616824294456,0.104602846312333,0,0,0,0,0,0.429765441419957,0,0.558564802544508,1.14580212005842,0,0,0,0,0.134366944973453,3.60299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0.714695326373367,0,0.25426853765475,1.62899880526114,2.5926644736038,0.979762080328227,0,0,2.55582032678133,0,0,0,0,0,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,3.13435086062435,3.50569964770837,3.32883516901568,0.947015026375446,1.76097531226803,3.55924488638614,1.83072054717539,1.96600200892211,1.70980920641059,1.18284119991707,0.95578060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| |||
|short_description=p@chr7:94059923..94059935,+ | |||
}} |
Revision as of 02:32, 14 September 2013
Short description: | p@chr7:94059923..94059935, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:94059923..94059935, + |
Coexpression cluster: | C1208_Chondrocyte_Preadipocyte_Fibroblast_umbilical_Smooth_skin_Olfactory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.84e-19 | 76 |
multi fate stem cell | 2.83e-16 | 427 |
somatic stem cell | 1.33e-15 | 433 |
stem cell | 9.62e-15 | 441 |
muscle cell | 1.72e-11 | 55 |
skin fibroblast | 1.84e-11 | 23 |
muscle precursor cell | 1.90e-11 | 58 |
myoblast | 1.90e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.90e-11 | 58 |
electrically responsive cell | 1.37e-09 | 61 |
electrically active cell | 1.37e-09 | 61 |
connective tissue cell | 1.74e-08 | 361 |
mesenchymal cell | 3.30e-08 | 354 |
smooth muscle cell | 7.22e-08 | 43 |
smooth muscle myoblast | 7.22e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 2.76e-12 | 62 |
striated muscle tissue | 2.76e-12 | 62 |
myotome | 2.76e-12 | 62 |
dense mesenchyme tissue | 1.18e-11 | 73 |
muscle tissue | 1.27e-11 | 64 |
musculature | 1.27e-11 | 64 |
musculature of body | 1.27e-11 | 64 |
somite | 3.47e-11 | 71 |
presomitic mesoderm | 3.47e-11 | 71 |
presumptive segmental plate | 3.47e-11 | 71 |
dermomyotome | 3.47e-11 | 71 |
trunk paraxial mesoderm | 3.47e-11 | 71 |
paraxial mesoderm | 6.66e-11 | 72 |
presumptive paraxial mesoderm | 6.66e-11 | 72 |
skin of body | 6.52e-10 | 41 |
connective tissue | 1.84e-09 | 371 |
epithelial vesicle | 2.25e-09 | 78 |
integument | 3.55e-09 | 46 |
integumental system | 3.55e-09 | 46 |
multilaminar epithelium | 4.27e-09 | 83 |
omentum | 5.71e-09 | 6 |
peritoneum | 5.71e-09 | 6 |
abdominal cavity | 5.71e-09 | 6 |
visceral peritoneum | 5.71e-09 | 6 |
adipose tissue | 9.32e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.20e-08 | 5 |
myotonic disease | 4.20e-08 | 5 |
muscle tissue disease | 4.20e-08 | 5 |
myopathy | 4.20e-08 | 5 |
muscular disease | 4.20e-08 | 5 |
myotonic dystrophy | 4.20e-08 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.