FFCP PHASE1:Mm9::chr3:50247405..50247418,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=26570|HGNC=|UniProt=Q9WTR6,Q542C8,Q8BYV9|association_with_transcript=116bp_to_ENSMUST00000029297,ENSMUST00000142932,NM_011990,uc008pdi.1,uc008pdj.1_5end|description=CAGE_peak_2_at_Slc7a11_5end|id=chr3:50247405..50247418,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002108!8.31e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0000072,1.44e-13,27;UBERON:0006562,8.47e-10,24;UBERON:0001557,8.47e-10,24;UBERON:0001042,8.47e-10,24;UBERON:0008814,8.47e-10,24;UBERON:0009145,8.47e-10,24;UBERON:0001264,1.77e-09,12;UBERON:0000153,2.10e-09,43;UBERON:0002370,8.64e-09,23;UBERON:0000974,8.64e-09,23;UBERON:0004807,8.64e-09,23;UBERON:0005058,8.64e-09,23;UBERON:0003351,8.64e-09,23;UBERON:0009113,8.64e-09,23;UBERON:0003295,8.64e-09,23;UBERON:0009722,8.64e-09,23;UBERON:0005562,8.64e-09,23;UBERON:0007690,8.64e-09,23;UBERON:0003408,2.56e-08,24;UBERON:0007811,4.13e-08,36;UBERON:0000065,1.12e-07,41;UBERON:0001004,2.07e-07,42|phase1_expression=0.480446541314382,0,0.454999239389536,0,0,0.16787927191189,0.700837921786577,0,0,0,0.171217968225505,0.159544317990673,0,0,0.333109761815663,0,0,0.157731082679119,0,0.42438965179803,0.255129870453209,0.496454756004426,0.261199789138935,0.319984845586813,0.45881856213434,0.57423196411502,0,0,0.380046838912748,0.756090389279792,1.10865255327652,0.635030673459631,0,0,0,0,0,10.8818223991596,4.6880120671428,2.09409497589519,19.9998705930545,21.8574555186703,7.76816564849846,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0.210324961351382,0.285650984403804,0.220868540951614,0,0,0,3.30347642998166,0,0.307213066512487,0,0,0,0.279182999001381,0.56276261003168,0.61119299110724,0.294628585473668,0.142371680799103,0,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,4.5463118612355,4.30711771307668,3.0331466700887,0.45673551887624,0,0,0,0,0,0,0,0,0,0,1.76922110389975,0,0,0,1.86391761218122,0.585561594023094,0.209446706813455,0.255457055208591,0.599075622529601,0,0.508280908292259,0.149790639404823,0,0,0.521472960576829,0.767146371990992,1.0389402227978,0.486723789203273,0.203678727700633,0.995255764880744,4.0435641349388,23.990371571058,0.780722657776222,0.459804208866946,0.900310649026746,0.753524089178575,0.272145996605311,0.12811372028485,0.0937017245597288,6.46758426847539,1.72454394346274,0.189106080167819,0.351902248327898,0.43839146485515,0.556094498451196,1.74126083261083,1.02891068203972,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,1.32167513193519,0,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0.216138049874694,0.398282546508734,0,0.114248512609729,0,0,0.387904974335251,0.0701358198903186,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0.172684981865896,0,1.50791283939272,0,0,0.275936746304732,0.481651769963376,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,1.92792789853084,0.709700426041343,0.178065603667255,0.162886959353576,2.96946221350564,17.2568679841952,0,0,1.88605079755898,2.95301892880773,2.45948118355142,0.258428293168221,0.727067458955011,1.42598951353889,7.58488219045958,8.4334886859999,10.3135543248187,0.340439605753788,0,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0,0,0,1.10264199027481,0,0.161464426695906,0.241251699712623,0.238744688006273,0.820704498725306,0.291480836629851,0,0,0,0.740778109478847,0,0,0,1.5298058699447,0.559805809294632,0.276399947608848,0,0,0,0,0.418176592028937,0.218362563746178,1.07891477107857,0.41326727862668,0.785267825952089,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9564559457553,0,0,0.51968329191118,3.04345382634718,4.37098980518783,4.44723163223885,3.54454865218985,6.96668504642219,6.70619898563999,8.16692099608408,6.91950953252242,7.40831180630537,20.6872116861377,1.13365191807606,0,0,0,0,0.375364950902364,5.31139710375069,0.643105137237198,0,0,0,0,0.171853182343688,0,0,0,0,0.906284817968409,0.51776031175182,0,0,0.341467211508268,0.729320151204882,0.419226325255965,0,0,0,0,0,0.50695859978048,0,0.280924522409647,0.320125762024346,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0,0.436039249896986,0.0941093804153306,0,0.182927972872773,0.263069711437843,0.271608227691724,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.499621155875892,0.233931608445408,0,0,0.220591419119515,0|short_description=p2@Slc7a11}} | ||
|EntrezGene=26570 | |||
|HGNC= | |||
|UniProt=Q9WTR6,Q542C8,Q8BYV9 | |||
|association_with_transcript=116bp_to_ENSMUST00000029297,ENSMUST00000142932,NM_011990,uc008pdi.1,uc008pdj.1_5end | |||
|description=CAGE_peak_2_at_Slc7a11_5end | |||
|id=chr3:50247405..50247418,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002108!8.31e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000072,1.44e-13,27;UBERON:0006562,8.47e-10,24;UBERON:0001557,8.47e-10,24;UBERON:0001042,8.47e-10,24;UBERON:0008814,8.47e-10,24;UBERON:0009145,8.47e-10,24;UBERON:0001264,1.77e-09,12;UBERON:0000153,2.10e-09,43;UBERON:0002370,8.64e-09,23;UBERON:0000974,8.64e-09,23;UBERON:0004807,8.64e-09,23;UBERON:0005058,8.64e-09,23;UBERON:0003351,8.64e-09,23;UBERON:0009113,8.64e-09,23;UBERON:0003295,8.64e-09,23;UBERON:0009722,8.64e-09,23;UBERON:0005562,8.64e-09,23;UBERON:0007690,8.64e-09,23;UBERON:0003408,2.56e-08,24;UBERON:0007811,4.13e-08,36;UBERON:0000065,1.12e-07,41;UBERON:0001004,2.07e-07,42 | |||
|phase1_expression=0.480446541314382,0,0.454999239389536,0,0,0.16787927191189,0.700837921786577,0,0,0,0.171217968225505,0.159544317990673,0,0,0.333109761815663,0,0,0.157731082679119,0,0.42438965179803,0.255129870453209,0.496454756004426,0.261199789138935,0.319984845586813,0.45881856213434,0.57423196411502,0,0,0.380046838912748,0.756090389279792,1.10865255327652,0.635030673459631,0,0,0,0,0,10.8818223991596,4.6880120671428,2.09409497589519,19.9998705930545,21.8574555186703,7.76816564849846,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0.210324961351382,0.285650984403804,0.220868540951614,0,0,0,3.30347642998166,0,0.307213066512487,0,0,0,0.279182999001381,0.56276261003168,0.61119299110724,0.294628585473668,0.142371680799103,0,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,4.5463118612355,4.30711771307668,3.0331466700887,0.45673551887624,0,0,0,0,0,0,0,0,0,0,1.76922110389975,0,0,0,1.86391761218122,0.585561594023094,0.209446706813455,0.255457055208591,0.599075622529601,0,0.508280908292259,0.149790639404823,0,0,0.521472960576829,0.767146371990992,1.0389402227978,0.486723789203273,0.203678727700633,0.995255764880744,4.0435641349388,23.990371571058,0.780722657776222,0.459804208866946,0.900310649026746,0.753524089178575,0.272145996605311,0.12811372028485,0.0937017245597288,6.46758426847539,1.72454394346274,0.189106080167819,0.351902248327898,0.43839146485515,0.556094498451196,1.74126083261083,1.02891068203972,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,1.32167513193519,0,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0.216138049874694,0.398282546508734,0,0.114248512609729,0,0,0.387904974335251,0.0701358198903186,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0.172684981865896,0,1.50791283939272,0,0,0.275936746304732,0.481651769963376,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,1.92792789853084,0.709700426041343,0.178065603667255,0.162886959353576,2.96946221350564,17.2568679841952,0,0,1.88605079755898,2.95301892880773,2.45948118355142,0.258428293168221,0.727067458955011,1.42598951353889,7.58488219045958,8.4334886859999,10.3135543248187,0.340439605753788,0,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0,0,0,1.10264199027481,0,0.161464426695906,0.241251699712623,0.238744688006273,0.820704498725306,0.291480836629851,0,0,0,0.740778109478847,0,0,0,1.5298058699447,0.559805809294632,0.276399947608848,0,0,0,0,0.418176592028937,0.218362563746178,1.07891477107857,0.41326727862668,0.785267825952089,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9564559457553,0,0,0.51968329191118,3.04345382634718,4.37098980518783,4.44723163223885,3.54454865218985,6.96668504642219,6.70619898563999,8.16692099608408,6.91950953252242,7.40831180630537,20.6872116861377,1.13365191807606,0,0,0,0,0.375364950902364,5.31139710375069,0.643105137237198,0,0,0,0,0.171853182343688,0,0,0,0,0.906284817968409,0.51776031175182,0,0,0.341467211508268,0.729320151204882,0.419226325255965,0,0,0,0,0,0.50695859978048,0,0.280924522409647,0.320125762024346,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0,0.436039249896986,0.0941093804153306,0,0.182927972872773,0.263069711437843,0.271608227691724,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.499621155875892,0.233931608445408,0,0,0.220591419119515,0 | |||
|short_description=p2@Slc7a11 | |||
}} |
Revision as of 02:14, 14 September 2013
Short description: | p2@Slc7a11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Slc7a11_5end |
Coexpression cluster: | NA |
Association with transcript: | 116bp_to_ENSMUST00000029297, ENSMUST00000142932, NM_011990, uc008pdi.1, uc008pdj.1_5end |
EntrezGene: | Slc7a11 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
segment of respiratory tract | 1.44e-13 | 27 |
pharynx | 8.47e-10 | 24 |
upper respiratory tract | 8.47e-10 | 24 |
chordate pharynx | 8.47e-10 | 24 |
pharyngeal arch system | 8.47e-10 | 24 |
pharyngeal region of foregut | 8.47e-10 | 24 |
pancreas | 1.77e-09 | 12 |
anterior region of body | 2.10e-09 | 43 |
thymus | 8.64e-09 | 23 |
neck | 8.64e-09 | 23 |
respiratory system epithelium | 8.64e-09 | 23 |
hemolymphoid system gland | 8.64e-09 | 23 |
pharyngeal epithelium | 8.64e-09 | 23 |
thymic region | 8.64e-09 | 23 |
pharyngeal gland | 8.64e-09 | 23 |
entire pharyngeal arch endoderm | 8.64e-09 | 23 |
thymus primordium | 8.64e-09 | 23 |
early pharyngeal endoderm | 8.64e-09 | 23 |
gland of gut | 2.56e-08 | 24 |
craniocervical region | 4.13e-08 | 36 |
respiratory tract | 1.12e-07 | 41 |
respiratory system | 2.07e-07 | 42 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.