FFCP PHASE1:Hg19::chr7:81400148..81400151,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:81400148..81400151,+|id=chr7:81400148..81400151,+|ontology_enrichment_celltype=CL:0000188!6.37e-08!9;CL:0000594!2.32e-07!3|ontology_enrichment_celltype_v019=CL:0000594;7.92e-22;3!CL:0000188;2.09e-19;9!CL:0002504;6.86e-10;3!CL:1000279;6.86e-10;3!CL:1000280;6.86e-10;3!CL:0000680;1.19e-09;7|ontology_enrichment_celltype_v019_2=CL:0000594,7.42e-22,3;CL:0000188,2.09e-19,9;CL:0002504,7.18e-10,3;CL:1000279,7.18e-10,3;CL:1000280,7.18e-10,3|ontology_enrichment_development_v019=UBERON:0005425;1.84e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3307;5.80e-15;2|ontology_enrichment_disease_v019_2=DOID:3307,6.02e-15,2|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001134;7.96e-11;16!UBERON:0002036;7.96e-11;16!UBERON:0002385;6.03e-10;31!UBERON:0001015;6.03e-10;31!UBERON:0000383;6.03e-10;31!UBERON:0000941;1.84e-08;1!UBERON:0001785;1.84e-08;1!UBERON:0002464;1.84e-08;1!UBERON:0004904;1.84e-08;1!UBERON:0001021;1.84e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.91e-08,1;UBERON:0001785,1.91e-08,1;UBERON:0002464,1.91e-08,1;UBERON:0004904,1.91e-08,1;UBERON:0001021,1.91e-08,1;UBERON:0003902,1.91e-08,1;UBERON:0005425,1.91e-08,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0.344745680736619,0,1.35426486594342,0,0.272906150057846,0,0.306083892370903,0,0,0,0.398927315243264,0,0,0,0,0.251248665256743,1.0429658368404,0.217188844705117,1.21079900526674,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0.326923806226917,0.151357427644931,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,1.17835279767846,1.37630371859161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.432359860250884,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,1.41849132023278,0,0.285955987316295,0,0,0,0.710783897485092,0,0,0,0,0,1.00451418286425,0,0,1.14861935834114,0,0,0.821905290201534,0,0,0,0,0,0,1.30139853857622,1.54657762555539,0,0,0,0,0,0.24538298343828,1.00034104211935,0.542530047399471,0,0,0,0,0.601892199455438,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0.364182336013434,1.04899531967539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62145851343933,4.45160656705776,0.275673144969061,5.80069322288678,5.075584286998,4.85791776271775,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.359744915166629,2.74537029736055,1.17812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0.709522128141196,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37897349296586,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0.332423363800313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.51595809741485,0.19351266257817,0.292357268344742,0.492692742319255,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432164393964449,0,0,0,0,0,2.60055530911367,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0,0,0,0,2.00640639386872,0,0,0,0,0,0,0,0.979762080328227,0,0,0,0,0,0,0.258565912723101,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0.124980407962107,0,0,0,2.81000943484129,0,0.298509605773748,0,1.66441758450784,0,0,0,0,0,0.15543720058278,0,0.159296767163702,0,0,3.7323558705677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.39997479170986,0,0.516644938982447,0,0,0,0,0,0,0,0,0,0,0.867550349813015,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,5.71077681036618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0.336283722218824,0,0,0,0.115233987555779,0,0.40781839786099,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0.697448552208751,0,2.40513409419076,0.207216164163037,0.3414369541879,0.691259661814092,0,0.236664001461131,0.426067023795788,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.103432995861895,0,0.23806443146374,0,0,0,0,1.41482032270754,0,0,0,0,0,0,0,5.7921684686082,0,0,0,0,0,0,0|short_description=p@chr7:81400148..81400151,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:81400148..81400151,+ | |||
|id=chr7:81400148..81400151,+ | |||
|ontology_enrichment_celltype=CL:0000188!6.37e-08!9;CL:0000594!2.32e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000594;7.92e-22;3!CL:0000188;2.09e-19;9!CL:0002504;6.86e-10;3!CL:1000279;6.86e-10;3!CL:1000280;6.86e-10;3!CL:0000680;1.19e-09;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000594,7.42e-22,3;CL:0000188,2.09e-19,9;CL:0002504,7.18e-10,3;CL:1000279,7.18e-10,3;CL:1000280,7.18e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.84e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;5.80e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,6.02e-15,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;7.96e-11;16!UBERON:0002036;7.96e-11;16!UBERON:0002385;6.03e-10;31!UBERON:0001015;6.03e-10;31!UBERON:0000383;6.03e-10;31!UBERON:0000941;1.84e-08;1!UBERON:0001785;1.84e-08;1!UBERON:0002464;1.84e-08;1!UBERON:0004904;1.84e-08;1!UBERON:0001021;1.84e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.91e-08,1;UBERON:0001785,1.91e-08,1;UBERON:0002464,1.91e-08,1;UBERON:0004904,1.91e-08,1;UBERON:0001021,1.91e-08,1;UBERON:0003902,1.91e-08,1;UBERON:0005425,1.91e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0.344745680736619,0,1.35426486594342,0,0.272906150057846,0,0.306083892370903,0,0,0,0.398927315243264,0,0,0,0,0.251248665256743,1.0429658368404,0.217188844705117,1.21079900526674,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0.326923806226917,0.151357427644931,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,1.17835279767846,1.37630371859161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.432359860250884,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,1.41849132023278,0,0.285955987316295,0,0,0,0.710783897485092,0,0,0,0,0,1.00451418286425,0,0,1.14861935834114,0,0,0.821905290201534,0,0,0,0,0,0,1.30139853857622,1.54657762555539,0,0,0,0,0,0.24538298343828,1.00034104211935,0.542530047399471,0,0,0,0,0.601892199455438,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0.364182336013434,1.04899531967539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62145851343933,4.45160656705776,0.275673144969061,5.80069322288678,5.075584286998,4.85791776271775,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.359744915166629,2.74537029736055,1.17812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0.709522128141196,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37897349296586,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0.332423363800313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.51595809741485,0.19351266257817,0.292357268344742,0.492692742319255,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432164393964449,0,0,0,0,0,2.60055530911367,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0,0,0,0,2.00640639386872,0,0,0,0,0,0,0,0.979762080328227,0,0,0,0,0,0,0.258565912723101,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0.124980407962107,0,0,0,2.81000943484129,0,0.298509605773748,0,1.66441758450784,0,0,0,0,0,0.15543720058278,0,0.159296767163702,0,0,3.7323558705677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.39997479170986,0,0.516644938982447,0,0,0,0,0,0,0,0,0,0,0.867550349813015,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,5.71077681036618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0.336283722218824,0,0,0,0.115233987555779,0,0.40781839786099,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0.697448552208751,0,2.40513409419076,0.207216164163037,0.3414369541879,0.691259661814092,0,0.236664001461131,0.426067023795788,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.103432995861895,0,0.23806443146374,0,0,0,0,1.41482032270754,0,0,0,0,0,0,0,5.7921684686082,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:81400148..81400151,+ | |||
}} |
Revision as of 02:11, 14 September 2013
Short description: | p@chr7:81400148..81400151, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:81400148..81400151, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle satellite cell | 7.42e-22 | 3 |
cell of skeletal muscle | 2.09e-19 | 9 |
enteric smooth muscle cell | 7.18e-10 | 3 |
smooth muscle cell of large intestine | 7.18e-10 | 3 |
smooth muscle cell of colon | 7.18e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.91e-08 | 1 |
cranial nerve | 1.91e-08 | 1 |
nerve trunk | 1.91e-08 | 1 |
nerve connecting eye with brain | 1.91e-08 | 1 |
nerve | 1.91e-08 | 1 |
retinal neural layer | 1.91e-08 | 1 |
presumptive neural retina | 1.91e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
teratoma | 6.02e-15 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.