FFCP PHASE1:Mm9::chr3:135488612..135488628,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67547|HGNC=|MCL_coexpression_id=46|UniProt=Q91W10|association_with_transcript=0bp_to_ENSMUST00000139953,NM_001135149,uc008rma.2,uc012cyh.1_5end|description=CAGE_peak_1_at_Slc39a8_5end|id=chr3:135488612..135488628,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005177!4.05e-16!85;UBERON:0009569!6.14e-15!66;UBERON:0002100!2.46e-13!98;UBERON:0004119!9.84e-13!130;UBERON:0000925!9.84e-13!130;UBERON:0006595!9.84e-13!130;UBERON:0004921!1.50e-12!126;UBERON:0004185!1.50e-12!126;UBERON:0001007!2.63e-12!128;UBERON:0001555!2.63e-12!128;UBERON:0007026!2.63e-12!128;UBERON:0005172!1.22e-10!49;UBERON:0005173!1.22e-10!49;UBERON:0002417!1.22e-10!49;UBERON:0000916!1.22e-10!49;UBERON:0000466!4.60e-10!79;UBERON:0005911!9.11e-10!69;UBERON:0003104!1.12e-09!131;UBERON:0009142!1.12e-09!131;UBERON:0000077!1.65e-09!97;UBERON:0005153!2.32e-09!17;UBERON:0002365!7.14e-09!25;UBERON:0002330!7.14e-09!25;UBERON:0001041!1.10e-08!92;UBERON:0002107!1.92e-08!22;UBERON:0007499!1.92e-08!22;UBERON:0006925!1.92e-08!22;UBERON:0009497!1.92e-08!22;UBERON:0000015!1.92e-08!22;UBERON:0002423!1.92e-08!22;UBERON:0006235!1.92e-08!22;UBERON:0008835!1.92e-08!22;UBERON:0003894!1.92e-08!22;UBERON:0004161!1.92e-08!22;UBERON:0008836!1.92e-08!22;UBERON:0003914!5.61e-08!47;UBERON:0009854!6.28e-08!23;UBERON:0009856!6.28e-08!23;UBERON:0002048!1.50e-07!14;UBERON:0000117!1.50e-07!14;UBERON:0000171!1.50e-07!14;UBERON:0000170!1.50e-07!14;UBERON:0005597!1.50e-07!14;UBERON:0000118!1.50e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.14e-17,79;UBERON:0009569,5.01e-15,66;UBERON:0002100,4.39e-14,90;UBERON:0005172,1.11e-10,49;UBERON:0005173,1.11e-10,49;UBERON:0002417,1.11e-10,49;UBERON:0000916,1.11e-10,49;UBERON:0004119,1.63e-10,118;UBERON:0000925,1.63e-10,118;UBERON:0006595,1.63e-10,118;UBERON:0004921,2.35e-10,114;UBERON:0001007,4.00e-10,116;UBERON:0001555,4.00e-10,116;UBERON:0007026,4.00e-10,116;UBERON:0005911,4.98e-10,69;UBERON:0005153,1.86e-09,17;UBERON:0002365,5.78e-09,25;UBERON:0002330,5.78e-09,25;UBERON:0002107,1.57e-08,22;UBERON:0007499,1.57e-08,22;UBERON:0006925,1.57e-08,22;UBERON:0009497,1.57e-08,22;UBERON:0000015,1.57e-08,22;UBERON:0002423,1.57e-08,22;UBERON:0006235,1.57e-08,22;UBERON:0008835,1.57e-08,22;UBERON:0003894,1.57e-08,22;UBERON:0004161,1.57e-08,22;UBERON:0008836,1.57e-08,22;UBERON:0009854,5.23e-08,23;UBERON:0009856,5.23e-08,23;UBERON:0003914,6.29e-08,47;UBERON:0002048,1.26e-07,14;UBERON:0000117,1.26e-07,14;UBERON:0000171,1.26e-07,14;UBERON:0000170,1.26e-07,14;UBERON:0005597,1.26e-07,14;UBERON:0000118,1.26e-07,14;UBERON:0006554,6.31e-07,18;UBERON:0001041,7.73e-07,80|phase1_expression=2.88267924788629,3.14077866875425,3.18499467572675,2.41971369045464,2.50447864973174,6.5472916045637,4.43864017131499,2.96983643915625,9.85521055061667,7.95819389494778,1.36974374580404,0.8774937489487,1.36960583944965,2.09808965805594,4.66353666541928,7.89653542820321,2.79824751251259,0,0.137114433605739,0,15.6479653877968,0.496454756004426,0,2.07990149631429,2.52350209173887,1.72269589234506,4.73838195774982,6.46413698057667,4.18051522804023,2.52030129759931,2.21730510655305,0.635030673459631,0,15.8481681015439,8.08784535303569,7.48055904113216,6.73758875665818,0.418531630736908,0,0.523523743973798,0.588231488031014,0,0.485510353031154,1.1330713617802,1.62203089951223,0.734187008646726,0.782391344348039,0,0.219686182734472,0.194429899074283,0.419959264876088,0,0,2.90144856804538,2.01656279485478,0.514518872071894,5.44413535883638,10.8291139378263,1.01158230429799,1.05798195854407,0.633831403506179,0.338844532069132,0,0.449949858640699,0.988866362566974,0.7104801149461,0,0.384218305321555,1.65903379693564,1.08004750665353,2.10324961351382,1.99955689082663,1.76694832761291,0.857435594504678,1.0543001812006,0.919218786610021,0,0.638436690425939,0.921639199537461,1.71452174049252,1.18933936683133,2.08365348222704,1.11673199600552,1.68828783009504,1.98637722109853,2.06240009831567,4.41352210477219,2.42319279572891,0.454357159999104,0.453429360640713,13.3337664802772,5.16254326188832,2.03991400112325,7.55584468292944,14.2950811838487,12.5447528387254,6.60088774619234,0,0,0,11.6900038414645,0,0,0,1.73192832808971,0.760079596425296,0,16.3282947998256,0.776813650941515,1.48442139064825,1.21439728736295,0.608930956624282,3.45923245884088,1.3565037649736,6.82014501387088,1.25666591329675,207.39657792914,9.10975948595443,0.884610551949874,1.7794353494215,3.09178125844551,4.363877278217,1.86391761218122,0.292780797011547,0.83778682725382,4.59822699375465,1.07833612055328,1.79970819298022,1.52484272487678,1.04853447583376,0.457500602818626,1.25654352112864,0.347648640384553,1.27857728665165,0.62336413367868,1.1356888414743,11.915205570487,5.22509276562391,30.326731012041,10.5220927943237,2.47228841629137,0.919608417733892,0.360124259610698,1.80845781402858,3.40182495756639,2.0498195245576,3.27956035959051,3.3631438196072,1.07783996466421,1.512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| ||
|EntrezGene=67547 | |||
|HGNC= | |||
|MCL_coexpression_id=46 | |||
|UniProt=Q91W10 | |||
|association_with_transcript=0bp_to_ENSMUST00000139953,NM_001135149,uc008rma.2,uc012cyh.1_5end | |||
|description=CAGE_peak_1_at_Slc39a8_5end | |||
|id=chr3:135488612..135488628,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005177!4.05e-16!85;UBERON:0009569!6.14e-15!66;UBERON:0002100!2.46e-13!98;UBERON:0004119!9.84e-13!130;UBERON:0000925!9.84e-13!130;UBERON:0006595!9.84e-13!130;UBERON:0004921!1.50e-12!126;UBERON:0004185!1.50e-12!126;UBERON:0001007!2.63e-12!128;UBERON:0001555!2.63e-12!128;UBERON:0007026!2.63e-12!128;UBERON:0005172!1.22e-10!49;UBERON:0005173!1.22e-10!49;UBERON:0002417!1.22e-10!49;UBERON:0000916!1.22e-10!49;UBERON:0000466!4.60e-10!79;UBERON:0005911!9.11e-10!69;UBERON:0003104!1.12e-09!131;UBERON:0009142!1.12e-09!131;UBERON:0000077!1.65e-09!97;UBERON:0005153!2.32e-09!17;UBERON:0002365!7.14e-09!25;UBERON:0002330!7.14e-09!25;UBERON:0001041!1.10e-08!92;UBERON:0002107!1.92e-08!22;UBERON:0007499!1.92e-08!22;UBERON:0006925!1.92e-08!22;UBERON:0009497!1.92e-08!22;UBERON:0000015!1.92e-08!22;UBERON:0002423!1.92e-08!22;UBERON:0006235!1.92e-08!22;UBERON:0008835!1.92e-08!22;UBERON:0003894!1.92e-08!22;UBERON:0004161!1.92e-08!22;UBERON:0008836!1.92e-08!22;UBERON:0003914!5.61e-08!47;UBERON:0009854!6.28e-08!23;UBERON:0009856!6.28e-08!23;UBERON:0002048!1.50e-07!14;UBERON:0000117!1.50e-07!14;UBERON:0000171!1.50e-07!14;UBERON:0000170!1.50e-07!14;UBERON:0005597!1.50e-07!14;UBERON:0000118!1.50e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.14e-17,79;UBERON:0009569,5.01e-15,66;UBERON:0002100,4.39e-14,90;UBERON:0005172,1.11e-10,49;UBERON:0005173,1.11e-10,49;UBERON:0002417,1.11e-10,49;UBERON:0000916,1.11e-10,49;UBERON:0004119,1.63e-10,118;UBERON:0000925,1.63e-10,118;UBERON:0006595,1.63e-10,118;UBERON:0004921,2.35e-10,114;UBERON:0001007,4.00e-10,116;UBERON:0001555,4.00e-10,116;UBERON:0007026,4.00e-10,116;UBERON:0005911,4.98e-10,69;UBERON:0005153,1.86e-09,17;UBERON:0002365,5.78e-09,25;UBERON:0002330,5.78e-09,25;UBERON:0002107,1.57e-08,22;UBERON:0007499,1.57e-08,22;UBERON:0006925,1.57e-08,22;UBERON:0009497,1.57e-08,22;UBERON:0000015,1.57e-08,22;UBERON:0002423,1.57e-08,22;UBERON:0006235,1.57e-08,22;UBERON:0008835,1.57e-08,22;UBERON:0003894,1.57e-08,22;UBERON:0004161,1.57e-08,22;UBERON:0008836,1.57e-08,22;UBERON:0009854,5.23e-08,23;UBERON:0009856,5.23e-08,23;UBERON:0003914,6.29e-08,47;UBERON:0002048,1.26e-07,14;UBERON:0000117,1.26e-07,14;UBERON:0000171,1.26e-07,14;UBERON:0000170,1.26e-07,14;UBERON:0005597,1.26e-07,14;UBERON:0000118,1.26e-07,14;UBERON:0006554,6.31e-07,18;UBERON:0001041,7.73e-07,80 | |||
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| |||
|short_description=p1@Slc39a8 | |||
}} |
Revision as of 01:37, 14 September 2013
Short description: | p1@Slc39a8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc39a8_5end |
Coexpression cluster: | MCL_coexpression_mm9:46 |
Association with transcript: | 0bp_to_ENSMUST00000139953, NM_001135149, uc008rma.2, uc012cyh.1_5end |
EntrezGene: | Slc39a8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.