FFCP PHASE1:Hg19::chr7:54609818..54609830,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=222008|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28499|TSSclassifier=W|UniProt=Q8TAG5|association_with_transcript=-187bp_to_ENST00000302287,ENST00000407838_5end|coexpression_cluster_id=C3|description=CAGE_peak_16_at_VSTM2A_5end|id=chr7:54609818..54609830,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006222;8.62e-12;1!UBERON:0006601;1.04e-09;82!UBERON:0010122;9.69e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002780!5.29e-82!41;UBERON:0001890!5.29e-82!41;UBERON:0006240!5.29e-82!41;UBERON:0003080!6.19e-80!42;UBERON:0001049!8.88e-80!57;UBERON:0005068!8.88e-80!57;UBERON:0006241!8.88e-80!57;UBERON:0007135!8.88e-80!57;UBERON:0002020!9.35e-80!34;UBERON:0003528!9.35e-80!34;UBERON:0001893!9.35e-80!34;UBERON:0001869!1.24e-78!32;UBERON:0002791!5.17e-76!33;UBERON:0002619!3.27e-73!22;UBERON:0002616!4.18e-72!59;UBERON:0001950!3.01e-65!20;UBERON:0000956!3.43e-64!25;UBERON:0000203!3.43e-64!25;UBERON:0000955!8.66e-64!69;UBERON:0006238!8.66e-64!69;UBERON:0005743!1.34e-63!86;UBERON:0000073!1.73e-63!94;UBERON:0001016!1.73e-63!94;UBERON:0001017!2.19e-63!82;UBERON:0003075!2.45e-57!86;UBERON:0007284!2.45e-57!86;UBERON:0003056!3.82e-57!61;UBERON:0002346!1.82e-54!90;UBERON:0000033!4.54e-35!123;UBERON:0007023!4.45e-34!115;UBERON:0000153!4.21e-33!129;UBERON:0007811!4.21e-33!129;UBERON:0004121!3.96e-32!169;UBERON:0000924!3.32e-31!173;UBERON:0006601!3.32e-31!173;UBERON:0000200!2.12e-26!6;UBERON:0001872!2.46e-22!5;UBERON:0000025!1.11e-19!194;UBERON:0001871!1.27e-19!7;UBERON:0002308!7.25e-17!9;UBERON:0000125!7.25e-17!9;UBERON:0002021!5.23e-15!5;UBERON:0000349!2.12e-14!5;UBERON:0004111!2.48e-14!241;UBERON:0002771!3.16e-14!3;UBERON:0000064!5.29e-13!219;UBERON:0000988!7.99e-13!3;UBERON:0002420!2.67e-12!9;UBERON:0007245!2.67e-12!9;UBERON:0010009!2.67e-12!9;UBERON:0010011!2.67e-12!9;UBERON:0000454!2.67e-12!9;UBERON:0000483!3.30e-11!309;UBERON:0000119!5.06e-11!312;UBERON:0000369!6.95e-11!4;UBERON:0002435!6.95e-11!4;UBERON:0000204!6.95e-11!4;UBERON:0010082!6.95e-11!4;UBERON:0000477!7.32e-11!286;UBERON:0009663!2.16e-10!7;UBERON:0001870!5.93e-10!2;UBERON:0001954!1.25e-09!2;UBERON:0003022!1.25e-09!2;UBERON:0002421!1.25e-09!2;UBERON:0002600!1.25e-09!2;UBERON:0002148!3.22e-09!2;UBERON:0009662!3.22e-09!2;UBERON:0000475!5.36e-09!365;UBERON:0002298!2.87e-08!8;UBERON:0000481!1.24e-07!347;UBERON:0005383!4.21e-07!3;UBERON:0005382!4.21e-07!3;UBERON:0000062!6.67e-07!511|ontology_enrichment_uberon_v019=UBERON:0001950;1.04e-69;20!UBERON:0002619;1.61e-63;22!UBERON:0002791;6.29e-59;32!UBERON:0001869;6.29e-59;32!UBERON:0001893;2.55e-57;34!UBERON:0000956;5.12e-56;25!UBERON:0000203;5.12e-56;25!UBERON:0003528;3.23e-55;34!UBERON:0002020;3.23e-55;34!UBERON:0002780;3.85e-43;41!UBERON:0001890;3.85e-43;41!UBERON:0000073;4.44e-27;53!UBERON:0002616;4.44e-27;53!UBERON:0000369;2.34e-24;4!UBERON:0002435;2.34e-24;4!UBERON:0000204;2.34e-24;4!UBERON:0002021;1.27e-19;5!UBERON:0001872;2.31e-19;5!UBERON:0002420;5.68e-19;9!UBERON:0007245;5.68e-19;9!UBERON:0010009;5.68e-19;9!UBERON:0010011;5.68e-19;9!UBERON:0000454;5.68e-19;9!UBERON:0001017;3.43e-18;75!UBERON:0000955;1.71e-17;68!UBERON:0000200;1.85e-16;6!UBERON:0005383;3.58e-15;3!UBERON:0005382;3.58e-15;3!UBERON:0001870;7.01e-15;3!UBERON:0001871;3.39e-14;6!UBERON:0009663;3.39e-14;7!UBERON:0001016;1.30e-13;83!UBERON:0002902;3.09e-12;1!UBERON:0009899;3.09e-12;1!UBERON:0002581;8.62e-12;1!UBERON:0001882;8.62e-12;1!UBERON:0002022;8.62e-12;1!UBERON:0001874;8.62e-12;1!UBERON:0005403;8.62e-12;1!UBERON:0000125;3.61e-11;9!UBERON:0002308;3.61e-11;9!UBERON:0007023;2.40e-10;114!UBERON:0000349;2.68e-09;5!UBERON:0002771;9.69e-07;2!UBERON:0001873;9.69e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001950,3.13e-70,20;UBERON:0002791,3.14e-69,32;UBERON:0001869,3.14e-69,32;UBERON:0003528,3.63e-65,34;UBERON:0002020,3.63e-65,34;UBERON:0001893,3.63e-65,34;UBERON:0002619,5.38e-64,22;UBERON:0002780,1.80e-61,41;UBERON:0001890,1.80e-61,41;UBERON:0003080,1.80e-61,41;UBERON:0006240,1.80e-61,41;UBERON:0000956,1.94e-56,25;UBERON:0000203,1.94e-56,25;UBERON:0000073,2.31e-47,53;UBERON:0002616,2.31e-47,53;UBERON:0001049,9.19e-45,56;UBERON:0005068,9.19e-45,56;UBERON:0006241,9.19e-45,56;UBERON:0007135,9.19e-45,56;UBERON:0003056,5.49e-41,61;UBERON:0000955,8.12e-41,68;UBERON:0006238,8.12e-41,68;UBERON:0001017,2.02e-38,81;UBERON:0001016,1.90e-34,89;UBERON:0003075,4.40e-30,82;UBERON:0007284,4.40e-30,82;UBERON:0002346,1.34e-28,86;UBERON:0007023,3.33e-24,114;UBERON:0000369,4.98e-24,4;UBERON:0002435,4.98e-24,4;UBERON:0000204,4.98e-24,4;UBERON:0010082,4.98e-24,4;UBERON:0010371,2.53e-23,104;UBERON:0002021,5.74e-20,5;UBERON:0001872,1.40e-19,5;UBERON:0002420,8.08e-19,9;UBERON:0007245,8.08e-19,9;UBERON:0010009,8.08e-19,9;UBERON:0010011,8.08e-19,9;UBERON:0000454,8.08e-19,9;UBERON:0010314,6.08e-18,132;UBERON:0004121,4.06e-17,171;UBERON:0000924,4.06e-17,171;UBERON:0006601,4.06e-17,171;UBERON:0000200,1.38e-16,6;UBERON:0005383,4.60e-15,3;UBERON:0005382,4.60e-15,3;UBERON:0001870,7.53e-15,3;UBERON:0001871,3.97e-14,6;UBERON:0009663,5.20e-14,7;UBERON:0011216,1.51e-12,223;UBERON:0002902,2.93e-12,1;UBERON:0009899,2.93e-12,1;UBERON:0002581,4.53e-12,1;UBERON:0002022,5.62e-12,1;UBERON:0001874,1.19e-11,1;UBERON:0000025,1.21e-11,192;UBERON:0001882,1.63e-11,1;UBERON:0005403,1.63e-11,1;UBERON:0000125,5.02e-11,9;UBERON:0002308,5.02e-11,9;UBERON:0000349,3.17e-09,5;UBERON:0004111,7.65e-09,240;UBERON:0001873,9.96e-07,2;UBERON:0010122,9.96e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88743956579008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54736358051564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02044907978036,0,0,0,0,0,0,0,0,0,0,0,2.53252521113357,0,0,0,1.31631238292384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,1.1713222286267,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,1.26621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0,0.137539436597234,0,0,0,1.57948847310864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.610131324509816,1.502291168478,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07387654227596,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,1.02766760154335,0,1.59633859057151,1.8460472781668,0.756215088665154,2.76629009856872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,1.56215619722769,0.826747186004736,1.26831620387814,0.546974809018219,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0.135939465953663,1.84163765975977,0,0,0,1.25692471932802,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0.603851374266694,0,0,0,0,0,0,0,0.8453114551668,0,0,0,0,0,0,0,0.730336388246517,0,0,0,1.22384682343646,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p16@VSTM2A}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=222008 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28499 | |||
|TSSclassifier=W | |||
|UniProt=Q8TAG5 | |||
|association_with_transcript=-187bp_to_ENST00000302287,ENST00000407838_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_16_at_VSTM2A_5end | |||
|id=chr7:54609818..54609830,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006222;8.62e-12;1!UBERON:0006601;1.04e-09;82!UBERON:0010122;9.69e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p16@VSTM2A | |||
}} |
Revision as of 01:34, 14 September 2013
Short description: | p16@VSTM2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_VSTM2A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -187bp_to_ENST00000302287, ENST00000407838_5end |
EntrezGene: | VSTM2A |
HGNC: | 28499 |
UniProt: | Q8TAG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.