FFCP PHASE1:Hg19::chr7:38316320..38316349,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=445347|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=|TSSclassifier=N|UniProt=|association_with_transcript=-401bp_to_uc003tgd.1_5end|coexpression_cluster_id=C260|description=CAGE_peak_3_at_TARP_5end|id=chr7:38316320..38316349,-|ontology_enrichment_celltype=CL:0000037!1.98e-22!172;CL:0000566!1.98e-22!172;CL:0000988!2.63e-20!182;CL:0002032!1.51e-18!165;CL:0000837!1.51e-18!165;CL:0000763!2.40e-16!112;CL:0000049!2.40e-16!112;CL:0000738!7.91e-08!140;CL:0000625!9.51e-08!11;CL:0002087!1.42e-07!119;CL:0000623!1.62e-07!3;CL:0000825!1.62e-07!3;CL:0000767!2.61e-07!3;CL:0000842!8.63e-07!3|ontology_enrichment_celltype_v019=CL:0000623;2.91e-13;3!CL:0000767;7.80e-13;3!CL:0000226;5.74e-12;3!CL:0000842;5.74e-12;3|ontology_enrichment_celltype_v019_2=CL:0000037,2.56e-20,168;CL:0000988,7.13e-19,177;CL:0002032,6.00e-16,161;CL:0000837,6.00e-16,161;CL:0000623,2.74e-13,3;CL:0000825,2.74e-13,3;CL:0000767,6.93e-13,3;CL:0000763,3.58e-12,108;CL:0000049,3.58e-12,108;CL:0000226,7.23e-12,3;CL:0000842,7.23e-12,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:8692!6.71e-24!31;DOID:1240!9.97e-20!39;DOID:2531!1.58e-13!51;DOID:0060083!1.58e-13!51|ontology_enrichment_disease_v019=DOID:8692;3.90e-28;31!DOID:1240;2.43e-20;39!DOID:2531;7.47e-13;51!DOID:0060083;7.47e-13;51|ontology_enrichment_disease_v019_2=DOID:8692,2.76e-29,31;DOID:1240,1.30e-25,39;DOID:2531,1.34e-18,51;DOID:0060083,1.34e-18,51|ontology_enrichment_uberon=UBERON:0000178!2.14e-18!15;UBERON:0000179!2.14e-18!15;UBERON:0000463!2.14e-18!15;UBERON:0002390!1.47e-13!102;UBERON:0003061!1.47e-13!102;UBERON:0002193!2.40e-12!112;UBERON:0007023!3.40e-11!115;UBERON:0004177!5.09e-07!7|ontology_enrichment_uberon_v019=UBERON:0000178;5.60e-36;15!UBERON:0000179;5.60e-36;15!UBERON:0000463;5.60e-36;15!UBERON:0002390;5.77e-29;32!UBERON:0002193;3.98e-15;42!UBERON:0002370;3.35e-08;2!UBERON:0005058;3.35e-08;2!UBERON:0009113;3.35e-08;2!UBERON:0004177;4.59e-07;5!UBERON:0005057;4.59e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.89e-36,15;UBERON:0000179,5.89e-36,15;UBERON:0000463,5.89e-36,15;UBERON:0002390,8.78e-14,98;UBERON:0003061,8.78e-14,98;UBERON:0002193,4.86e-12,108;UBERON:0002370,4.19e-09,4;UBERON:0005058,4.19e-09,4;UBERON:0009113,4.19e-09,4;UBERON:0003295,4.19e-09,4;UBERON:0005562,4.19e-09,4;UBERON:0004177,9.20e-09,7;UBERON:0005057,9.20e-09,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.68719270643137,6.90892916574983,2.78669021968937,0,0,0,0,0,5.28480790802725,0.553995408531877,0.401088894940283,2.60413044859022,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0,0,0,0.752969358170419,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0.580418477257168,0,0,0,0,0.217188844705117,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,0,0,0,0,0,0,0,0,0,0.560508562981536,2.89722493252585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91139248594458,3.25541726928209,2.85135613334512,0.602300476311091,0.76791966692651,0,1.89421801635213,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.81966119172167,10.6396610509041,3.45004119775228,15.9145364986888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10152039184331,2.5885704098234,1.38745825144478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,1.0457418040996,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.564862804660675,0,0,0,0,4.56702848308952,7.64637207142375,3.98753031021914,4.76463550915578,5.75907182320672,7.78167973431261,3.24018862342869,3.17250070517708,0,0,0,0,0,0,0,48.4977872581744,14.7459135001922,3.17510374085824,2.59697552219644,5.33514638415572,0,2.50687833236837,2.50634477090067,3.04725200042886,6.42352300414798,1.61439765752838,0.851692475380653,0,3.6868891717015,4.02616994206349,3.67068111766199,4.68931428964897,0,0,0.811367035427949,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.492339221844278,0,0,0,13.3008816258987,0,9.57932369387759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.06411153777611,0.166211681900156,0,0,0,0,0.953619473882272,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55493176133945,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.293104467356165,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=445347 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-401bp_to_uc003tgd.1_5end | |||
|coexpression_cluster_id=C260 | |||
|description=CAGE_peak_3_at_TARP_5end | |||
|id=chr7:38316320..38316349,- | |||
|ontology_enrichment_celltype=CL:0000037!1.98e-22!172;CL:0000566!1.98e-22!172;CL:0000988!2.63e-20!182;CL:0002032!1.51e-18!165;CL:0000837!1.51e-18!165;CL:0000763!2.40e-16!112;CL:0000049!2.40e-16!112;CL:0000738!7.91e-08!140;CL:0000625!9.51e-08!11;CL:0002087!1.42e-07!119;CL:0000623!1.62e-07!3;CL:0000825!1.62e-07!3;CL:0000767!2.61e-07!3;CL:0000842!8.63e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000623;2.91e-13;3!CL:0000767;7.80e-13;3!CL:0000226;5.74e-12;3!CL:0000842;5.74e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.56e-20,168;CL:0000988,7.13e-19,177;CL:0002032,6.00e-16,161;CL:0000837,6.00e-16,161;CL:0000623,2.74e-13,3;CL:0000825,2.74e-13,3;CL:0000767,6.93e-13,3;CL:0000763,3.58e-12,108;CL:0000049,3.58e-12,108;CL:0000226,7.23e-12,3;CL:0000842,7.23e-12,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!6.71e-24!31;DOID:1240!9.97e-20!39;DOID:2531!1.58e-13!51;DOID:0060083!1.58e-13!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.90e-28;31!DOID:1240;2.43e-20;39!DOID:2531;7.47e-13;51!DOID:0060083;7.47e-13;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.76e-29,31;DOID:1240,1.30e-25,39;DOID:2531,1.34e-18,51;DOID:0060083,1.34e-18,51 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.14e-18!15;UBERON:0000179!2.14e-18!15;UBERON:0000463!2.14e-18!15;UBERON:0002390!1.47e-13!102;UBERON:0003061!1.47e-13!102;UBERON:0002193!2.40e-12!112;UBERON:0007023!3.40e-11!115;UBERON:0004177!5.09e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.60e-36;15!UBERON:0000179;5.60e-36;15!UBERON:0000463;5.60e-36;15!UBERON:0002390;5.77e-29;32!UBERON:0002193;3.98e-15;42!UBERON:0002370;3.35e-08;2!UBERON:0005058;3.35e-08;2!UBERON:0009113;3.35e-08;2!UBERON:0004177;4.59e-07;5!UBERON:0005057;4.59e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.89e-36,15;UBERON:0000179,5.89e-36,15;UBERON:0000463,5.89e-36,15;UBERON:0002390,8.78e-14,98;UBERON:0003061,8.78e-14,98;UBERON:0002193,4.86e-12,108;UBERON:0002370,4.19e-09,4;UBERON:0005058,4.19e-09,4;UBERON:0009113,4.19e-09,4;UBERON:0003295,4.19e-09,4;UBERON:0005562,4.19e-09,4;UBERON:0004177,9.20e-09,7;UBERON:0005057,9.20e-09,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.68719270643137,6.90892916574983,2.78669021968937,0,0,0,0,0,5.28480790802725,0.553995408531877,0.401088894940283,2.60413044859022,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0,0,0,0.752969358170419,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0.580418477257168,0,0,0,0,0.217188844705117,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,0,0,0,0,0,0,0,0,0,0.560508562981536,2.89722493252585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91139248594458,3.25541726928209,2.85135613334512,0.602300476311091,0.76791966692651,0,1.89421801635213,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.81966119172167,10.6396610509041,3.45004119775228,15.9145364986888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10152039184331,2.5885704098234,1.38745825144478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,1.0457418040996,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.564862804660675,0,0,0,0,4.56702848308952,7.64637207142375,3.98753031021914,4.76463550915578,5.75907182320672,7.78167973431261,3.24018862342869,3.17250070517708,0,0,0,0,0,0,0,48.4977872581744,14.7459135001922,3.17510374085824,2.59697552219644,5.33514638415572,0,2.50687833236837,2.50634477090067,3.04725200042886,6.42352300414798,1.61439765752838,0.851692475380653,0,3.6868891717015,4.02616994206349,3.67068111766199,4.68931428964897,0,0,0.811367035427949,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.492339221844278,0,0,0,13.3008816258987,0,9.57932369387759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.06411153777611,0.166211681900156,0,0,0,0,0.953619473882272,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55493176133945,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.293104467356165,0,0,0,0,0,0.854299300541557,1.41483874589699,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.26766918776564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0.11294608203896,0,0,0.0771741581079447,0.874238242015829,0,0,0,0,0,0,0,0.657887425858975,1.48253142339228,0,0,0,0,1.46067277649303,0,0.143339583151451,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.213233981900981,0,1.74390056557216,1.24149428591716,0,0.12729431655633,0.202117188958219,0,0,0.202056159043763,0,0,0,0,0,0,0,0.244482888365733,0,0,0.805095174364105,0 | |||
|short_description=p3@TARP | |||
}} |
Revision as of 01:08, 14 September 2013
Short description: | p3@TARP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_TARP_5end |
Coexpression cluster: | C260_acute_chronic_Natural_NK_Basophils_biphenotypic_blood |
Association with transcript: | -401bp_to_uc003tgd.1_5end |
EntrezGene: | TARP |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.56e-20 | 168 |
hematopoietic cell | 7.13e-19 | 177 |
hematopoietic oligopotent progenitor cell | 6.00e-16 | 161 |
hematopoietic multipotent progenitor cell | 6.00e-16 | 161 |
natural killer cell | 2.74e-13 | 3 |
pro-NK cell | 2.74e-13 | 3 |
basophil | 6.93e-13 | 3 |
myeloid cell | 3.58e-12 | 108 |
common myeloid progenitor | 3.58e-12 | 108 |
single nucleate cell | 7.23e-12 | 3 |
mononuclear cell | 7.23e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 5.89e-36 | 15 |
haemolymphatic fluid | 5.89e-36 | 15 |
organism substance | 5.89e-36 | 15 |
hematopoietic system | 8.78e-14 | 98 |
blood island | 8.78e-14 | 98 |
hemolymphoid system | 4.86e-12 | 108 |
thymus | 4.19e-09 | 4 |
hemolymphoid system gland | 4.19e-09 | 4 |
thymic region | 4.19e-09 | 4 |
pharyngeal gland | 4.19e-09 | 4 |
thymus primordium | 4.19e-09 | 4 |
hemopoietic organ | 9.20e-09 | 7 |
immune organ | 9.20e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.76e-29 | 31 |
leukemia | 1.30e-25 | 39 |
hematologic cancer | 1.34e-18 | 51 |
immune system cancer | 1.34e-18 | 51 |
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