FFCP PHASE1:Hg19::chr7:33945132..33945160,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=168667 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24154 | |||
|TSSclassifier=S | |||
|UniProt=C9JY72,F8WDG9 | |||
|association_with_transcript=0bp_to_ENST00000436222,ENST00000444773_5end | |||
|coexpression_cluster_id=C4684 | |||
|description=CAGE_peak_1_at_BMPER_5end | |||
|id=chr7:33945132..33945160,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.63e-33!180;CL:0000057!1.48e-22!75;CL:0000359!1.02e-14!32;CL:0000192!1.25e-14!42;CL:0000514!1.25e-14!42;CL:0000680!1.26e-14!57;CL:0000056!1.26e-14!57;CL:0000355!1.26e-14!57;CL:0000187!2.68e-14!54;CL:0000393!5.25e-13!60;CL:0000211!5.25e-13!60;CL:0000183!1.95e-12!59;CL:0002620!4.55e-12!23;CL:0002494!5.53e-09!16;CL:0000222!2.50e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.65e-15;32!CL:0002620;9.30e-13;23!CL:0000192;1.59e-11;43!CL:0002494;6.69e-10;16!CL:0000057;2.88e-09;73!CL:0000187;6.04e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.74e-24,76;CL:0000359,1.93e-16,32;CL:0000192,3.56e-15,43;CL:0000514,3.56e-15,43;CL:0000680,2.43e-13,58;CL:0000056,2.43e-13,58;CL:0000355,2.43e-13,58;CL:0000187,6.10e-13,55;CL:0002620,1.03e-12,23;CL:0000393,3.11e-11,61;CL:0000211,3.11e-11,61;CL:0002494,7.20e-10,16 | |||
|ontology_enrichment_development_v019=CL:0000514;1.59e-11;43!CL:0000355;4.09e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.99e-19!83;UBERON:0002329!4.99e-19!83;UBERON:0003077!4.99e-19!83;UBERON:0003059!4.99e-19!83;UBERON:0007282!4.99e-19!83;UBERON:0009618!4.99e-19!83;UBERON:0007285!4.99e-19!83;UBERON:0000475!8.36e-19!365;UBERON:0004290!2.82e-18!70;UBERON:0000486!4.63e-16!82;UBERON:0000025!6.45e-15!194;UBERON:0002385!7.77e-15!63;UBERON:0001015!7.77e-15!63;UBERON:0000383!7.77e-15!63;UBERON:0001134!7.95e-15!61;UBERON:0002036!7.95e-15!61;UBERON:0003082!7.95e-15!61;UBERON:0004872!8.17e-14!84;UBERON:0005256!3.22e-13!143;UBERON:0000481!5.80e-13!347;UBERON:0000483!6.49e-13!309;UBERON:0004111!1.23e-12!241;UBERON:0000119!3.29e-12!312;UBERON:0000468!3.78e-12!659;UBERON:0000477!5.47e-12!286;UBERON:0001637!3.42e-11!42;UBERON:0003509!3.42e-11!42;UBERON:0004572!3.42e-11!42;UBERON:0004573!3.97e-11!33;UBERON:0004571!3.97e-11!33;UBERON:0002199!5.01e-11!45;UBERON:0002416!5.01e-11!45;UBERON:0000948!1.45e-10!24;UBERON:0005498!1.45e-10!24;UBERON:0004140!1.45e-10!24;UBERON:0009881!1.45e-10!24;UBERON:0004141!1.45e-10!24;UBERON:0003084!1.45e-10!24;UBERON:0007005!1.45e-10!24;UBERON:0004139!1.45e-10!24;UBERON:0004291!1.45e-10!24;UBERON:0003914!2.00e-10!118;UBERON:0001981!4.69e-10!60;UBERON:0007500!4.69e-10!60;UBERON:0004537!4.69e-10!60;UBERON:0006965!4.69e-10!60;UBERON:0007100!5.81e-10!27;UBERON:0002100!1.59e-09!216;UBERON:0002097!1.06e-08!40;UBERON:0003102!1.82e-08!95;UBERON:0000467!2.83e-08!625;UBERON:0000055!4.12e-08!69;UBERON:0000480!4.14e-08!626;UBERON:0007023!2.68e-07!115;UBERON:0001135!6.46e-07!15;UBERON:0002049!8.31e-07!79;UBERON:0007798!8.31e-07!79;UBERON:0003104!9.22e-07!238;UBERON:0009142!9.22e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.11e-11;33!UBERON:0004571;2.11e-11;33!UBERON:0000948;1.70e-10;22!UBERON:0001637;8.45e-09;42!UBERON:0003509;8.45e-09;42!UBERON:0004572;8.45e-09;42!UBERON:0007100;3.33e-08;25!UBERON:0002199;3.33e-08;46!UBERON:0002416;3.33e-08;46!UBERON:0002097;2.11e-07;41!UBERON:0003102;4.03e-07;50!UBERON:0001135;5.04e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003077,4.45e-17,72;UBERON:0007285,4.45e-17,72;UBERON:0002329,7.41e-17,71;UBERON:0003059,7.41e-17,71;UBERON:0007282,7.41e-17,71;UBERON:0004290,7.41e-17,71;UBERON:0009618,7.41e-17,71;UBERON:0007524,1.60e-16,73;UBERON:0007503,1.97e-15,78;UBERON:0000486,4.22e-14,83;UBERON:0004872,6.45e-14,83;UBERON:0000025,9.02e-14,192;UBERON:0010314,2.98e-13,132;UBERON:0001134,3.32e-13,62;UBERON:0002036,3.32e-13,62;UBERON:0003082,3.32e-13,62;UBERON:0002385,5.89e-13,64;UBERON:0001015,5.89e-13,64;UBERON:0000383,5.89e-13,64;UBERON:0004573,6.15e-13,33;UBERON:0004571,6.15e-13,33;UBERON:0001637,8.50e-13,42;UBERON:0003509,8.50e-13,42;UBERON:0004572,8.50e-13,42;UBERON:0002199,3.31e-12,46;UBERON:0002416,3.31e-12,46;UBERON:0005256,7.37e-12,122;UBERON:0000948,1.23e-11,24;UBERON:0005498,1.23e-11,24;UBERON:0004140,1.23e-11,24;UBERON:0009881,1.23e-11,24;UBERON:0004141,1.23e-11,24;UBERON:0003084,1.23e-11,24;UBERON:0007005,1.23e-11,24;UBERON:0004139,1.23e-11,24;UBERON:0004291,1.23e-11,24;UBERON:0003914,8.89e-11,117;UBERON:0007500,3.34e-10,59;UBERON:0001981,3.34e-10,59;UBERON:0004537,3.34e-10,59;UBERON:0006965,3.34e-10,59;UBERON:0004111,6.95e-10,240;UBERON:0000483,1.04e-09,306;UBERON:0002097,1.29e-09,41;UBERON:0007100,2.89e-09,27;UBERON:0000119,3.24e-09,309;UBERON:0003104,1.09e-08,160;UBERON:0009142,1.09e-08,160;UBERON:0000055,2.66e-08,68;UBERON:0003102,8.94e-08,99;UBERON:0004535,1.70e-07,109;UBERON:0001135,4.05e-07,15;UBERON:0002049,4.45e-07,78;UBERON:0007798,4.45e-07,78;UBERON:0001009,8.26e-07,112 | |||
|phase1_expression=6.17706489519893,14.9870366723688,3.10099689011137,7.00513088471913,9.38618298297304,1.74467704820074,48.126976851979,15.1612769622439,29.2527903583819,10.8122932060664,0.697801167972428,1.09220686065086,0.263766978228454,0.123766352960047,0.331397375727916,11.4295274896802,4.82155622419182,10.2243412654232,7.80692478064811,0.861847406537515,0.204000691244253,0,0.286235987131057,0.273748850145768,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,56.0755792522112,6.70700859703636,5.62595272111533,66.8662431911448,36.5976674764199,15.3537310098473,2.3858578411533,19.9520296824081,0,0,0.087834785693126,2.0956652079634,0,0,0,0.174129737299267,0,0,0,0,0,3.4409383804245,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.17859945656816,0.44905874525234,0.450445921933289,0,0,0.183201743930407,0,0,0.436094052142534,9.93943903390637,32.7973025211262,52.8312631444743,90.9272087773739,28.3734705758686,9.53151920241922,6.4049397437823,5.42668606517752,51.3498208409614,18.8594940897563,58.8462851208451,0,0,3.51482147750695,3.43376084513353,9.69802096625564,7.32298534703825,7.51580791320095,12.7879626050824,15.7304903506518,0.61246251376468,0.122834317311768,0.826606249406124,22.572054288359,13.3524141810421,12.7422590671324,14.3723628363248,1.85169725349473,1.62654075833553,4.15596173226274,13.608306247306,10.7270728529657,9.314759652209,6.91936317276128,35.5191478663947,43.1385925413506,88.5875346846968,40.2122068753099,35.0378599410692,13.6549486224183,17.681101351501,35.1054771061834,6.33340533547791,48.2148508806259,77.6901144541007,30.5511047387554,38.696045584311,10.4782182156746,10.5127567232502,0.193260853163297,0,1.14721838155602,0.243947412259191,1.19276791489337,10.2250669725176,0.932949495138334,5.04641701751257,0.72995471815166,40.6768784057521,5.78916844373597,11.0507937081984,2.78620756819187,2.16563844500876,0.118306800039844,0.168584690078102,0,0,0,0,0.404493924480493,0,0,3.69077727312324,2.80483547606892,1.2347220339942,1.47008711385542,1.26755034821831,2.94848165003288,36.6289742142471,0,0,0,0.439001141634502,0,0,0,2.28065813717227,3.11980435583874,0,0.115930404975077,0,0,0,0.761016608938393,0,0,0,0,0,3.74935335947108,2.18376766658517,0.850650583454319,0,0,0,0,0,0,0,0,0.190493682876507,0,0,1.71072446022705,0.205654985406647,0,0,0,0,0,19.9078442266978,3.57656445851882,1.690605505112,1.06375246633948,2.08014873822732,0.257207374262142,0,0,4.57529579706072,15.7360265563518,5.76268235746538,0.325736184293735,3.55391948742546,15.0470855857352,1.80863626235752,5.22920075160176,1.19967589418468,0,0,0,4.0736225433569,0,0,8.68687840005475,1.02738161275192,1.96967059563885,0,0,0,0.128343036279748,1.01637849688985,2.60279707715243,0,0.502548796003046,1.91381625495949,0,0,0,1.10422342547226,0.500170521059677,0,0.207970861530807,1.60586089917446,0,1.63997980989798,4.51419149591578,2.27407504055985,3.10419213877515,2.65690239414175,0.737476674166813,23.024157834042,0,0,0,0,0,1.5156378572313,0,0.604780586659361,7.69134204238208,14.1185015425017,5.89386198309454,2.81906128362542,11.2575594794675,6.11244900345709,1.48418066444991,11.8741464228045,12.7844442225451,13.0582178061957,12.4621063004069,9.87788216909654,0,0.40101294060657,0,8.03701137152247,0.728364672026868,0.786746489756545,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0,1.72732732881711,1.54227252690289,2.70946437543853,1.00337954770971,0,0,0,0,0,0,0,0,7.21287081534056,0,0.082509499920588,1.14853107599234,1.30012049207304,1.6068392984416,0.386682873168488,0.616194468458578,1.99554777143968,0.964856007391714,0.537101224341368,3.0453505721988,0.681813019328807,2.1367688555217,0,0.192190067365106,2.93509238737543,0,3.71876439437829,66.1105928344344,13.940745403212,115.820626146209,102.202757820868,25.2280567701771,5.5597265731176,40.2180931744995,0,1.89827654831236,8.19709833872447,1.02359116524534,6.41908482050881,89.4151126671882,16.4839214441838,9.713112709499,6.86342574340137,6.71530693370413,113.222189681057,45.9679931401724,19.3778889869931,0.975267478179181,107.965075906659,15.8475220135133,0.545999645631943,15.1303812190473,57.6341394763238,60.0988224465275,27.20099798489,21.9225442626881,0,4.59126326432643,5.88440093191842,4.957175969596,2.25356482025793,7.45739031461068,20.7305476537686,6.06340787518125,0.709522128141196,31.8772529299473,2.96365403663912,5.69209760648573,1.04980416073495,0,0,0,8.5670858706869,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90460633053462,0,0,0,4.7748896947538,0,0,1.9882952955326,1.68803299692615,2.00355669041231,0,0.211125408127993,2.39097585901284,9.66993704359017,0,14.0108095027952,0,64.0741550583323,0,0,0,2.26879832964947,0,4.44547960578548,6.78532922266653,2.31920245404628,3.9922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| |||
|short_description=p1@BMPER | |||
}} |
Revision as of 01:00, 14 September 2013
Short description: | p1@BMPER |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_BMPER_5end |
Coexpression cluster: | C4684_Smooth_lung_Fibroblast_mesenchymal_Chondrocyte_basal_mesodermal |
Association with transcript: | 0bp_to_ENST00000436222, ENST00000444773_5end |
EntrezGene: | BMPER |
HGNC: | 24154 |
UniProt: | C9JY72F8WDG9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.74e-24 | 76 |
vascular associated smooth muscle cell | 1.93e-16 | 32 |
smooth muscle cell | 3.56e-15 | 43 |
smooth muscle myoblast | 3.56e-15 | 43 |
muscle precursor cell | 2.43e-13 | 58 |
myoblast | 2.43e-13 | 58 |
multi-potent skeletal muscle stem cell | 2.43e-13 | 58 |
muscle cell | 6.10e-13 | 55 |
skin fibroblast | 1.03e-12 | 23 |
electrically responsive cell | 3.11e-11 | 61 |
electrically active cell | 3.11e-11 | 61 |
cardiocyte | 7.20e-10 | 16 |
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