FFCP PHASE1:Hg19::chr7:22767216..22767223,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3569|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6018|TSSclassifier=N|UniProt=|association_with_transcript=397bp_to_ENST00000485300_5end|coexpression_cluster_id=C0|description=CAGE_peak_10_at_IL6_5end|id=chr7:22767216..22767223,+|ontology_enrichment_celltype=CL:0000359!8.45e-11!32;CL:0002595!7.15e-09!5;CL:0000048!1.81e-08!430;CL:0002057!2.70e-08!42;CL:0000723!3.75e-08!436;CL:0000034!9.57e-08!444;CL:0000860!1.56e-07!45;CL:0000192!1.65e-07!42;CL:0000514!1.65e-07!42;CL:0000569!9.10e-07!4;CL:0000011!9.10e-07!4|ontology_enrichment_celltype_v019=CL:0000860;1.35e-33;33!CL:0002057;1.35e-33;33!CL:0000473;3.35e-25;39!CL:0000234;3.35e-25;39!CL:0000576;2.30e-13;48!CL:0000766;3.11e-10;69!CL:0002595;2.36e-09;5!CL:0002087;2.66e-07;104!CL:0000763;6.15e-07;100|ontology_enrichment_celltype_v019_2=CL:0000860,7.14e-29,42;CL:0002057,7.14e-29,42;CL:0000473,4.44e-25,48;CL:0000234,4.44e-25,48;CL:0002194,9.23e-20,59;CL:0000576,9.23e-20,59;CL:0000040,9.23e-20,59;CL:0000559,9.23e-20,59;CL:0002009,4.49e-19,61;CL:0000839,1.55e-17,66;CL:0000557,2.96e-17,67;CL:0000766,5.75e-16,72;CL:0000763,3.62e-10,108;CL:0000049,3.62e-10,108;CL:0002087,1.86e-09,115;CL:0002595,2.57e-09,5;CL:0002031,5.34e-09,120;CL:0000738,9.32e-08,136|ontology_enrichment_development_v019=CL:0002057;5.41e-20;42|ontology_enrichment_disease=DOID:2394!3.32e-13!14;DOID:120!4.61e-09!27;DOID:193!2.83e-08!29|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004573!3.61e-10!33;UBERON:0004571!3.61e-10!33;UBERON:0001637!4.81e-10!42;UBERON:0003509!4.81e-10!42;UBERON:0004572!4.81e-10!42;UBERON:0002204!5.09e-09!167;UBERON:0003834!7.15e-09!5;UBERON:0001533!7.15e-09!5;UBERON:0002118!2.82e-08!5;UBERON:0004532!2.82e-08!5;UBERON:0003513!2.96e-08!8;UBERON:0000055!2.01e-07!69;UBERON:0004872!3.99e-07!84;UBERON:0001981!5.18e-07!60;UBERON:0007500!5.18e-07!60;UBERON:0004537!5.18e-07!60;UBERON:0006965!5.18e-07!60|ontology_enrichment_uberon_v019=UBERON:0003834;2.36e-09;5!UBERON:0001533;2.36e-09;5!UBERON:0003513;6.39e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.68e-15,76;UBERON:0001474,7.46e-14,82;UBERON:0004765,1.70e-12,90;UBERON:0002405,4.78e-12,93;UBERON:0002204,6.11e-12,167;UBERON:0002390,2.34e-11,98;UBERON:0003061,2.34e-11,98;UBERON:0001434,4.22e-11,100;UBERON:0003081,6.55e-11,203;UBERON:0002193,3.62e-10,108;UBERON:0003834,2.57e-09,5;UBERON:0001533,2.57e-09,5;UBERON:0000926,2.47e-08,315;UBERON:0004120,2.47e-08,315;UBERON:0006603,2.47e-08,315;UBERON:0003513,6.78e-07,7|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,2.41321976515633,1.29096936716765,1.35426486594342,0,0,0,1.22433556948361,0,4.47535988059329,0,0,0,11.6083695451434,14.7520158419696,5.60540024096017,0,0,0,6.65939452896706,1.47311054395026,2.84816148696796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0.671928512795438,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,0,0,0,0.31481234683064,0,0,0,0,0.37064843820784,1.5743737541619,0,0,0,0,0,0,1.56989728039846,0,0,0,0.202182481573316,0,0,0,0.243713489631284,2.11300293513511,0,0,0,0,0.66343897524122,1.31535265576129,0,0,0.405820753925408,0,0.281695602532241,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320635281006135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35857467866569,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0.686520205190771,0,0.932623203496683,1.03498604992744,0.318593534327405,1.79921244865442,0,0,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3569 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6018 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=397bp_to_ENST00000485300_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_10_at_IL6_5end | |||
|id=chr7:22767216..22767223,+ | |||
|ontology_enrichment_celltype=CL:0000359!8.45e-11!32;CL:0002595!7.15e-09!5;CL:0000048!1.81e-08!430;CL:0002057!2.70e-08!42;CL:0000723!3.75e-08!436;CL:0000034!9.57e-08!444;CL:0000860!1.56e-07!45;CL:0000192!1.65e-07!42;CL:0000514!1.65e-07!42;CL:0000569!9.10e-07!4;CL:0000011!9.10e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.35e-33;33!CL:0002057;1.35e-33;33!CL:0000473;3.35e-25;39!CL:0000234;3.35e-25;39!CL:0000576;2.30e-13;48!CL:0000766;3.11e-10;69!CL:0002595;2.36e-09;5!CL:0002087;2.66e-07;104!CL:0000763;6.15e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.14e-29,42;CL:0002057,7.14e-29,42;CL:0000473,4.44e-25,48;CL:0000234,4.44e-25,48;CL:0002194,9.23e-20,59;CL:0000576,9.23e-20,59;CL:0000040,9.23e-20,59;CL:0000559,9.23e-20,59;CL:0002009,4.49e-19,61;CL:0000839,1.55e-17,66;CL:0000557,2.96e-17,67;CL:0000766,5.75e-16,72;CL:0000763,3.62e-10,108;CL:0000049,3.62e-10,108;CL:0002087,1.86e-09,115;CL:0002595,2.57e-09,5;CL:0002031,5.34e-09,120;CL:0000738,9.32e-08,136 | |||
|ontology_enrichment_development_v019=CL:0002057;5.41e-20;42 | |||
|ontology_enrichment_disease=DOID:2394!3.32e-13!14;DOID:120!4.61e-09!27;DOID:193!2.83e-08!29 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004573!3.61e-10!33;UBERON:0004571!3.61e-10!33;UBERON:0001637!4.81e-10!42;UBERON:0003509!4.81e-10!42;UBERON:0004572!4.81e-10!42;UBERON:0002204!5.09e-09!167;UBERON:0003834!7.15e-09!5;UBERON:0001533!7.15e-09!5;UBERON:0002118!2.82e-08!5;UBERON:0004532!2.82e-08!5;UBERON:0003513!2.96e-08!8;UBERON:0000055!2.01e-07!69;UBERON:0004872!3.99e-07!84;UBERON:0001981!5.18e-07!60;UBERON:0007500!5.18e-07!60;UBERON:0004537!5.18e-07!60;UBERON:0006965!5.18e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;2.36e-09;5!UBERON:0001533;2.36e-09;5!UBERON:0003513;6.39e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.68e-15,76;UBERON:0001474,7.46e-14,82;UBERON:0004765,1.70e-12,90;UBERON:0002405,4.78e-12,93;UBERON:0002204,6.11e-12,167;UBERON:0002390,2.34e-11,98;UBERON:0003061,2.34e-11,98;UBERON:0001434,4.22e-11,100;UBERON:0003081,6.55e-11,203;UBERON:0002193,3.62e-10,108;UBERON:0003834,2.57e-09,5;UBERON:0001533,2.57e-09,5;UBERON:0000926,2.47e-08,315;UBERON:0004120,2.47e-08,315;UBERON:0006603,2.47e-08,315;UBERON:0003513,6.78e-07,7 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,2.41321976515633,1.29096936716765,1.35426486594342,0,0,0,1.22433556948361,0,4.47535988059329,0,0,0,11.6083695451434,14.7520158419696,5.60540024096017,0,0,0,6.65939452896706,1.47311054395026,2.84816148696796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0.671928512795438,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,0,0,0,0.31481234683064,0,0,0,0,0.37064843820784,1.5743737541619,0,0,0,0,0,0,1.56989728039846,0,0,0,0.202182481573316,0,0,0,0.243713489631284,2.11300293513511,0,0,0,0,0.66343897524122,1.31535265576129,0,0,0.405820753925408,0,0.281695602532241,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320635281006135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35857467866569,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0.686520205190771,0,0.932623203496683,1.03498604992744,0.318593534327405,1.79921244865442,0,0,0.265841714557995,0,0.300515217994437,0.761610424337591,0,0.909243296012797,0.107410557042488,0.464033759878494,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607719912354764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0.690359926060101,0,0,0,0,0,0.655087670040387,0,0,0.781078098613847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@IL6 | |||
}} |
Revision as of 00:32, 14 September 2013
Short description: | p10@IL6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_IL6_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 397bp_to_ENST00000485300_5end |
EntrezGene: | IL6 |
HGNC: | 6018 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.14e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.14e-29 | 42 |
defensive cell | 4.44e-25 | 48 |
phagocyte | 4.44e-25 | 48 |
monopoietic cell | 9.23e-20 | 59 |
monocyte | 9.23e-20 | 59 |
monoblast | 9.23e-20 | 59 |
promonocyte | 9.23e-20 | 59 |
macrophage dendritic cell progenitor | 4.49e-19 | 61 |
myeloid lineage restricted progenitor cell | 1.55e-17 | 66 |
granulocyte monocyte progenitor cell | 2.96e-17 | 67 |
myeloid leukocyte | 5.75e-16 | 72 |
myeloid cell | 3.62e-10 | 108 |
common myeloid progenitor | 3.62e-10 | 108 |
nongranular leukocyte | 1.86e-09 | 115 |
smooth muscle cell of the subclavian artery | 2.57e-09 | 5 |
hematopoietic lineage restricted progenitor cell | 5.34e-09 | 120 |
leukocyte | 9.32e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.68e-15 | 76 |
bone element | 7.46e-14 | 82 |
skeletal element | 1.70e-12 | 90 |
immune system | 4.78e-12 | 93 |
musculoskeletal system | 6.11e-12 | 167 |
hematopoietic system | 2.34e-11 | 98 |
blood island | 2.34e-11 | 98 |
skeletal system | 4.22e-11 | 100 |
lateral plate mesoderm | 6.55e-11 | 203 |
hemolymphoid system | 3.62e-10 | 108 |
thoracic segment blood vessel | 2.57e-09 | 5 |
subclavian artery | 2.57e-09 | 5 |
mesoderm | 2.47e-08 | 315 |
mesoderm-derived structure | 2.47e-08 | 315 |
presumptive mesoderm | 2.47e-08 | 315 |
trunk blood vessel | 6.78e-07 | 7 |
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