FFCP PHASE1:Mm9::chr2:72314230..72314269,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=66953|HGNC=|MCL_coexpression_id=151|UniProt=A2AR40,Q9D0M2|association_with_transcript=-6bp_to_NM_025866,uc008kbx.1_5end|description=CAGE_peak_1_at_Cdca7_5end|id=chr2:72314230..72314269,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!2.62e-08!29|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.83e-08,29;UBERON:0005057,1.83e-08,29;UBERON:0000153,3.13e-07,43|phase1_expression=7.52699581392532,1.04692622291808,1.36499771816861,2.72217790176147,3.00537437967808,7.55456723603504,6.77476657727024,6.71441281896197,7.03943610758334,7.72412936862578,34.4148116133265,38.7692692717335,4.28001824828014,3.84649770643589,14.6568295198892,17.2103977281352,19.5877325875881,8.99067171270977,8.22686601634433,8.48779303596061,3.31668831589172,25.5177744586275,32.9111734315059,7.1996590257033,5.04700418347774,1.14846392823004,3.4460959692726,4.09395342103189,4.56056206695297,7.81293402255785,7.31710685162506,26.0362576118449,25.2176562909674,15.8481681015439,19.9307617628379,21.942973187321,18.1710727073509,8.37063261473815,10.9386948233332,17.7998072951091,8.2352408324342,11.6117732442936,16.5073520030592,1.6366586336825,1.21652317463417,1.83546752161682,2.34717403304412,11.1192829754028,1.97717564461025,2.3331587888914,7.41928034614421,2.87505128729943,5.36904339384756,2.90144856804538,1.68046899571232,1.54355661621568,2.0057340795713,0.515672092277442,5.26022798234954,4.23192783417626,3.80298842103708,4.74382344896785,2.66788438833342,2.2497492932035,0,0.7104801149461,3.89480143673926,2.68952813725088,16.4866483570479,14.3106294631592,20.8221711737868,1.14260393761521,2.65042249141936,18.1286382838132,27.4118047112156,19.3035945188104,0,0.766124028511126,0.46081959976873,5.80299666012853,5.03182039813253,5.2091337055676,0.837548997004143,0,0.763991238884051,2.35702868378934,1.56608848879013,3.72798891650601,2.49896437999507,2.41828992341714,1.73918693221007,0,0.679971333707751,1.61910957491345,0.649776417447669,1.79210754838934,2.52799956237153,3.06774580640504,7.53379413348319,7.42013106471715,3.23939865486365,3.84979432242953,0,0,5.84525810730278,5.06719730950197,5.56076889516262,2.2836775943812,7.25026074212081,0.742210695324124,16.1341353892506,9.43842982767638,7.37969591219387,5.42601505989441,3.76283862834255,3.01599819191221,2.22475470960936,0.433798070759735,17.6922110389975,7.60304194752823,10.8212344045593,8.727754556434,5.59175283654366,0.585561594023094,0.209446706813455,7.91916871146633,25.520621519761,34.7943583976176,21.9831492836402,0.449371918214468,3.66000482254901,5.78010019719176,0.521472960576829,0.255715457330331,0.83115217823824,0.973447578406546,11.5078481150857,6.59356944233493,1.26361379216837,0.841767423545896,26.9349316932797,23.2201125477808,19.2666478891724,15.0704817835715,11.6342413548771,11.6583485459213,6.74652416830048,2.32833033665114,30.1795190105979,25.7184269028234,17.4191612922309,18.4124415239163,15.8486932058591,8.00979983000983,8.64284972913362,19.5053581482123,30.1951670544691,29.852357225307,20.7439354558783,9.73491130916859,9.14651633926275,9.7233513188948,8.52281048106757,8.46086196513836,9.56456099901745,5.8133486187602,7.77992864058896,1.75148013550754,7.73431294593358,3.61168420974009,1.78351381000883,2.63159977365598,3.07370161407471,0.134206418760372,0.420579897128254,3.49875682089567,2.64335026387038,5.28901133327089,28.1540490706509,18.3466970769746,13.5310834388198,11.0925938542838,8.2279876222602,7.60902504450237,9.01605216934572,3.29397909448022,6.78605063760728,7.75930240960488,6.04388670069272,7.19055526923377,6.70027954611552,5.57595565112228,23.139483916276,19.0795016058247,19.1603150644237,13.4409876377907,9.89157684554891,8.76697748628982,4.7427402843193,1.18088118383682,1.255989822731,0.616985819609003,1.1858105083486,17.8524263116221,18.0834275504147,18.8884174403277,13.9973483758067,13.0235666266305,10.1850340712568,9.20627639842594,7.13394997810156,9.06052663520669,4.31304619582064,2.97712758134803,5.92871578917665,4.2938409251009,2.33216637578486,0.482443521363367,2.03228509183265,19.7071068241304,19.5557971730431,17.6534889206196,16.6630076284836,10.0503754465089,3.57065461329021,3.51240566144038,6.46304090835383,5.09368786192182,4.9430978283821,2.78567635016755,3.45369963731791,0.867894351489069,0,0,3.93411418415229,4.13905119457099,1.12385412991454,0.35163505977661,11.1475762856139,0.504941854408746,10.7272794601527,10.5418460960092,7.97066571611356,8.36390792833932,5.79276552614225,5.37845408498782,10.5250782435473,7.89090816360542,5.13874111330481,1.60660658210904,6.10342366395555,19.5872164033981,13.6825045857004,4.12425307431339,0,16.2663026223838,16.3254720760966,6.41257271170054,7.08724542913855,5.22639751504677,4.65170927702798,7.99774204850512,9.26893183800275,4.10847785316561,4.21674434299995,0,0.340439605753788,17.6459872150684,15.9111181052788,11.3598628566744,9.75371285032505,8.91844088010353,7.569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| ||
|EntrezGene=66953 | |||
|HGNC= | |||
|MCL_coexpression_id=151 | |||
|UniProt=A2AR40,Q9D0M2 | |||
|association_with_transcript=-6bp_to_NM_025866,uc008kbx.1_5end | |||
|description=CAGE_peak_1_at_Cdca7_5end | |||
|id=chr2:72314230..72314269,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.62e-08!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.83e-08,29;UBERON:0005057,1.83e-08,29;UBERON:0000153,3.13e-07,43 | |||
|phase1_expression=7.52699581392532,1.04692622291808,1.36499771816861,2.72217790176147,3.00537437967808,7.55456723603504,6.77476657727024,6.71441281896197,7.03943610758334,7.72412936862578,34.4148116133265,38.7692692717335,4.28001824828014,3.84649770643589,14.6568295198892,17.2103977281352,19.5877325875881,8.99067171270977,8.22686601634433,8.48779303596061,3.31668831589172,25.5177744586275,32.9111734315059,7.1996590257033,5.04700418347774,1.14846392823004,3.4460959692726,4.09395342103189,4.56056206695297,7.81293402255785,7.31710685162506,26.0362576118449,25.2176562909674,15.8481681015439,19.9307617628379,21.942973187321,18.1710727073509,8.37063261473815,10.9386948233332,17.7998072951091,8.2352408324342,11.6117732442936,16.5073520030592,1.6366586336825,1.21652317463417,1.83546752161682,2.34717403304412,11.1192829754028,1.97717564461025,2.3331587888914,7.41928034614421,2.87505128729943,5.36904339384756,2.90144856804538,1.68046899571232,1.54355661621568,2.0057340795713,0.515672092277442,5.26022798234954,4.23192783417626,3.80298842103708,4.74382344896785,2.66788438833342,2.2497492932035,0,0.7104801149461,3.89480143673926,2.68952813725088,16.4866483570479,14.3106294631592,20.8221711737868,1.14260393761521,2.65042249141936,18.1286382838132,27.4118047112156,19.3035945188104,0,0.766124028511126,0.46081959976873,5.80299666012853,5.03182039813253,5.2091337055676,0.837548997004143,0,0.763991238884051,2.35702868378934,1.56608848879013,3.72798891650601,2.49896437999507,2.41828992341714,1.73918693221007,0,0.679971333707751,1.61910957491345,0.649776417447669,1.79210754838934,2.52799956237153,3.06774580640504,7.53379413348319,7.42013106471715,3.23939865486365,3.84979432242953,0,0,5.84525810730278,5.06719730950197,5.56076889516262,2.2836775943812,7.25026074212081,0.742210695324124,16.1341353892506,9.43842982767638,7.37969591219387,5.42601505989441,3.76283862834255,3.01599819191221,2.22475470960936,0.433798070759735,17.6922110389975,7.60304194752823,10.8212344045593,8.727754556434,5.59175283654366,0.585561594023094,0.209446706813455,7.91916871146633,25.520621519761,34.7943583976176,21.9831492836402,0.449371918214468,3.66000482254901,5.78010019719176,0.521472960576829,0.255715457330331,0.83115217823824,0.973447578406546,11.5078481150857,6.59356944233493,1.26361379216837,0.841767423545896,26.9349316932797,23.2201125477808,19.2666478891724,15.0704817835715,11.6342413548771,11.6583485459213,6.74652416830048,2.32833033665114,30.1795190105979,25.7184269028234,17.4191612922309,18.4124415239163,15.8486932058591,8.00979983000983,8.64284972913362,19.5053581482123,30.1951670544691,29.852357225307,20.7439354558783,9.73491130916859,9.14651633926275,9.7233513188948,8.52281048106757,8.46086196513836,9.56456099901745,5.8133486187602,7.77992864058896,1.75148013550754,7.73431294593358,3.61168420974009,1.78351381000883,2.63159977365598,3.07370161407471,0.134206418760372,0.420579897128254,3.49875682089567,2.64335026387038,5.28901133327089,28.1540490706509,18.3466970769746,13.5310834388198,11.0925938542838,8.2279876222602,7.60902504450237,9.01605216934572,3.29397909448022,6.78605063760728,7.75930240960488,6.04388670069272,7.19055526923377,6.70027954611552,5.57595565112228,23.139483916276,19.0795016058247,19.1603150644237,13.4409876377907,9.89157684554891,8.76697748628982,4.7427402843193,1.18088118383682,1.255989822731,0.616985819609003,1.1858105083486,17.8524263116221,18.0834275504147,18.8884174403277,13.9973483758067,13.0235666266305,10.1850340712568,9.20627639842594,7.13394997810156,9.06052663520669,4.31304619582064,2.97712758134803,5.92871578917665,4.2938409251009,2.33216637578486,0.482443521363367,2.03228509183265,19.7071068241304,19.5557971730431,17.6534889206196,16.6630076284836,10.0503754465089,3.57065461329021,3.51240566144038,6.46304090835383,5.09368786192182,4.9430978283821,2.78567635016755,3.45369963731791,0.867894351489069,0,0,3.93411418415229,4.13905119457099,1.12385412991454,0.35163505977661,11.1475762856139,0.504941854408746,10.7272794601527,10.5418460960092,7.97066571611356,8.36390792833932,5.79276552614225,5.37845408498782,10.5250782435473,7.89090816360542,5.13874111330481,1.60660658210904,6.10342366395555,19.5872164033981,13.6825045857004,4.12425307431339,0,16.2663026223838,16.3254720760966,6.41257271170054,7.08724542913855,5.22639751504677,4.65170927702798,7.99774204850512,9.26893183800275,4.10847785316561,4.21674434299995,0,0.340439605753788,17.6459872150684,15.9111181052788,11.3598628566744,9.75371285032505,8.91844088010353,7.56925494769756,3.65357938937519,7.04015124191131,1.27099242518292,0.882113592219848,5.27636009412736,4.19807509409354,9.52944213864862,7.63983001620073,8.69946768648825,7.86998258900597,0.370850604021019,13.1570578214347,17.9556575128004,16.6675074632741,21.0972671845254,20.3674399304327,15.7856939512501,16.487907709404,20.1530091346068,13.681797406638,0.954670618015114,23.8833675153757,17.8921131071627,13.2846569210816,14.6361807210128,7.42432716737004,10.6542833644008,7.02554373665355,2.87931536182433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| |||
|short_description=p1@Cdca7 | |||
}} | |||
Revision as of 00:28, 14 September 2013
| Short description: | p1@Cdca7 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Cdca7_5end |
| Coexpression cluster: | MCL_coexpression_mm9:151 |
| Association with transcript: | -6bp_to_NM_025866, uc008kbx.1_5end |
| EntrezGene: | Cdca7 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hemopoietic organ | 1.83e-08 | 29 |
| immune organ | 1.83e-08 | 29 |
| anterior region of body | 3.13e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
