FFCP PHASE1:Hg19::chr7:20197239..20197244,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:20197239..20197244,-|id=chr7:20197239..20197244,-|ontology_enrichment_celltype=CL:0000945!1.99e-07!24;CL:0000826!1.99e-07!24;CL:0002076!3.08e-07!43|ontology_enrichment_celltype_v019=CL:0000322;8.38e-07;3!CL:0000945;8.68e-07;24|ontology_enrichment_celltype_v019_2=CL:0000945,7.46e-07,24;CL:0000826,7.46e-07,24;CL:0000322,8.62e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1749!3.32e-09!14;DOID:305!1.69e-08!106;DOID:162!1.99e-08!235;DOID:0050686!3.76e-08!137;DOID:14566!5.17e-08!239|ontology_enrichment_disease_v019=DOID:3910;1.38e-09;2!DOID:4468;1.38e-09;2!DOID:4929;1.38e-09;2|ontology_enrichment_disease_v019_2=DOID:4929,1.22e-09,2;DOID:3910,1.44e-09,2;DOID:4468,1.86e-09,2|ontology_enrichment_uberon=UBERON:0000344!4.61e-12!12;UBERON:0005409!3.45e-10!35;UBERON:0001007!1.41e-07!155;UBERON:0001555!1.41e-07!155;UBERON:0007026!1.41e-07!155;UBERON:0004119!1.78e-07!169;UBERON:0000925!1.78e-07!169;UBERON:0006595!1.78e-07!169;UBERON:0000160!1.92e-07!27;UBERON:0002294!2.13e-07!7;UBERON:0001173!2.13e-07!7;UBERON:0004912!2.13e-07!7;UBERON:0004921!2.64e-07!129;UBERON:0004185!2.64e-07!129|ontology_enrichment_uberon_v019=UBERON:0002114;6.43e-23;2!UBERON:0002171;8.01e-18;1!UBERON:0004913;8.01e-18;1!UBERON:0003703;8.01e-18;1!UBERON:0006518;8.01e-18;1!UBERON:0008949;8.01e-18;1!UBERON:0000101;8.01e-18;1!UBERON:0002167;8.01e-18;1!UBERON:0001174;8.01e-18;1!UBERON:0004914;8.01e-18;1!UBERON:0002108;3.59e-14;4!UBERON:0004903;1.38e-09;2!UBERON:0002173;1.38e-09;2!UBERON:0002186;1.38e-09;2!UBERON:0000058;1.52e-07;10!UBERON:0005409;4.63e-07;22!UBERON:0004821;8.38e-07;3!UBERON:0007499;8.38e-07;3!UBERON:0003215;8.38e-07;3!UBERON:0010368;8.38e-07;3!UBERON:0009911;8.38e-07;3!UBERON:0002299;8.38e-07;3!UBERON:0006524;8.38e-07;3!UBERON:0008874;8.38e-07;3!UBERON:0002169;8.38e-07;3!UBERON:0004894;8.38e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002114,8.99e-23,2;UBERON:0004913,6.23e-18,1;UBERON:0003703,6.23e-18,1;UBERON:0001174,6.23e-18,1;UBERON:0004914,6.23e-18,1;UBERON:0002171,1.22e-17,1;UBERON:0006518,1.22e-17,1;UBERON:0008949,1.22e-17,1;UBERON:0000101,1.22e-17,1;UBERON:0002167,1.22e-17,1;UBERON:0002108,4.39e-14,4;UBERON:0004903,1.44e-09,2;UBERON:0002173,1.44e-09,2;UBERON:0002186,1.44e-09,2;UBERON:0004821,8.62e-07,3;UBERON:0003215,8.62e-07,3;UBERON:0010368,8.62e-07,3;UBERON:0009911,8.62e-07,3;UBERON:0002299,8.62e-07,3;UBERON:0006524,8.62e-07,3;UBERON:0008874,8.62e-07,3;UBERON:0002169,8.62e-07,3;UBERON:0004894,8.62e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60468152070698,1.9704141467987,1.73163718890094,0,0,0,0,0,0,0.46480320348181,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.918251677112708,0,1.91801137739712,0,0,0,0.580418477257168,0,0.622822248995575,0,0,0,0,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0.368323955743585,0,0,0,0.451199612907412,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0.423347165447766,0,0.280797178113459,0,0.156679895773023,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0.755798243562828,0,0.492339221844278,0,0.359473404589307,0.537063524026827,0,0.0986434056369336,0,0,0,0,0,0,0.262379999988587,0,0.1137934482855,1.5255219017566,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0.158936578980379,0,1.14262965711403,0.706765357169704,0,0.995261931078505,0.442287822516696,0,0,0,0,0,0,0,0.364909578431332,0.391329237864179,0,0,3.62972148145992,0,0,0,0,0,0,0,0,0.853828638089378,0,0,0.0979923974143777,0.0870592065804026,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0.213452994739353,0,0,0,0.343189995723929,0.14405479798815,0,0,0,0,0,0,0,0,0,0,2.10309883423452,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:20197239..20197244,- | |||
|id=chr7:20197239..20197244,- | |||
|ontology_enrichment_celltype=CL:0000945!1.99e-07!24;CL:0000826!1.99e-07!24;CL:0002076!3.08e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000322;8.38e-07;3!CL:0000945;8.68e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,7.46e-07,24;CL:0000826,7.46e-07,24;CL:0000322,8.62e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!3.32e-09!14;DOID:305!1.69e-08!106;DOID:162!1.99e-08!235;DOID:0050686!3.76e-08!137;DOID:14566!5.17e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:3910;1.38e-09;2!DOID:4468;1.38e-09;2!DOID:4929;1.38e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,1.22e-09,2;DOID:3910,1.44e-09,2;DOID:4468,1.86e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000344!4.61e-12!12;UBERON:0005409!3.45e-10!35;UBERON:0001007!1.41e-07!155;UBERON:0001555!1.41e-07!155;UBERON:0007026!1.41e-07!155;UBERON:0004119!1.78e-07!169;UBERON:0000925!1.78e-07!169;UBERON:0006595!1.78e-07!169;UBERON:0000160!1.92e-07!27;UBERON:0002294!2.13e-07!7;UBERON:0001173!2.13e-07!7;UBERON:0004912!2.13e-07!7;UBERON:0004921!2.64e-07!129;UBERON:0004185!2.64e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002114;6.43e-23;2!UBERON:0002171;8.01e-18;1!UBERON:0004913;8.01e-18;1!UBERON:0003703;8.01e-18;1!UBERON:0006518;8.01e-18;1!UBERON:0008949;8.01e-18;1!UBERON:0000101;8.01e-18;1!UBERON:0002167;8.01e-18;1!UBERON:0001174;8.01e-18;1!UBERON:0004914;8.01e-18;1!UBERON:0002108;3.59e-14;4!UBERON:0004903;1.38e-09;2!UBERON:0002173;1.38e-09;2!UBERON:0002186;1.38e-09;2!UBERON:0000058;1.52e-07;10!UBERON:0005409;4.63e-07;22!UBERON:0004821;8.38e-07;3!UBERON:0007499;8.38e-07;3!UBERON:0003215;8.38e-07;3!UBERON:0010368;8.38e-07;3!UBERON:0009911;8.38e-07;3!UBERON:0002299;8.38e-07;3!UBERON:0006524;8.38e-07;3!UBERON:0008874;8.38e-07;3!UBERON:0002169;8.38e-07;3!UBERON:0004894;8.38e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002114,8.99e-23,2;UBERON:0004913,6.23e-18,1;UBERON:0003703,6.23e-18,1;UBERON:0001174,6.23e-18,1;UBERON:0004914,6.23e-18,1;UBERON:0002171,1.22e-17,1;UBERON:0006518,1.22e-17,1;UBERON:0008949,1.22e-17,1;UBERON:0000101,1.22e-17,1;UBERON:0002167,1.22e-17,1;UBERON:0002108,4.39e-14,4;UBERON:0004903,1.44e-09,2;UBERON:0002173,1.44e-09,2;UBERON:0002186,1.44e-09,2;UBERON:0004821,8.62e-07,3;UBERON:0003215,8.62e-07,3;UBERON:0010368,8.62e-07,3;UBERON:0009911,8.62e-07,3;UBERON:0002299,8.62e-07,3;UBERON:0006524,8.62e-07,3;UBERON:0008874,8.62e-07,3;UBERON:0002169,8.62e-07,3;UBERON:0004894,8.62e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60468152070698,1.9704141467987,1.73163718890094,0,0,0,0,0,0,0.46480320348181,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.918251677112708,0,1.91801137739712,0,0,0,0.580418477257168,0,0.622822248995575,0,0,0,0,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0.368323955743585,0,0,0,0.451199612907412,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0.423347165447766,0,0.280797178113459,0,0.156679895773023,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0.755798243562828,0,0.492339221844278,0,0.359473404589307,0.537063524026827,0,0.0986434056369336,0,0,0,0,0,0,0.262379999988587,0,0.1137934482855,1.5255219017566,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0.158936578980379,0,1.14262965711403,0.706765357169704,0,0.995261931078505,0.442287822516696,0,0,0,0,0,0,0,0.364909578431332,0.391329237864179,0,0,3.62972148145992,0,0,0,0,0,0,0,0,0.853828638089378,0,0,0.0979923974143777,0.0870592065804026,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0.213452994739353,0,0,0,0.343189995723929,0.14405479798815,0,0,0,0,0,0,0,0,0,0,2.10309883423452,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0.2249738915515,0,0,0,0.0788057072991982,0.104909176269996,0,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.106787412567695,0,1.24271716604159,0,0,0,0,0,0.2506898940227,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0.516644938982447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.235939446695481,0,0.115525666150338,0,0,0,0,0,0,0,0,1.6264169483875,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0.230467975111559,0,0.0679697329768317,0,0,0.333694205676207,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.196300467230486,0.365753774946808,0,0,0,0,0,0,0,0,0,0.905777061400041,0.617393264863557,0.437119121007915,0,0,0.235676547101626,0,0,0,0,0.0939839179798536,0,0.699588091474503,0,0.352894871715692,0.0802413666891683,1.46067277649303,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0.651226148887796,0,0,0,0,0,0,0,0,0.961705476909699 | |||
|short_description=p@chr7:20197239..20197244,- | |||
}} |
Revision as of 00:24, 14 September 2013
Short description: | p@chr7:20197239..20197244, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:20197239..20197244, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 7.46e-07 | 24 |
pro-B cell | 7.46e-07 | 24 |
pneumocyte | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
duodenum | 8.99e-23 | 2 |
hepatopancreatic ampulla | 6.23e-18 | 1 |
extrahepatic bile duct | 6.23e-18 | 1 |
common bile duct | 6.23e-18 | 1 |
duodenal papilla | 6.23e-18 | 1 |
lower lobe of right lung | 1.22e-17 | 1 |
right lung lobe | 1.22e-17 | 1 |
lower lobe of lung | 1.22e-17 | 1 |
lobe of lung | 1.22e-17 | 1 |
right lung | 1.22e-17 | 1 |
small intestine | 4.39e-14 | 4 |
bronchoalveolar duct junction | 1.44e-09 | 2 |
alveolar duct | 1.44e-09 | 2 |
bronchiole | 1.44e-09 | 2 |
pulmonary alveolus epithelium | 8.62e-07 | 3 |
alveolus | 8.62e-07 | 3 |
pulmonary lobule | 8.62e-07 | 3 |
lobule | 8.62e-07 | 3 |
alveolus of lung | 8.62e-07 | 3 |
alveolar system | 8.62e-07 | 3 |
pulmonary acinus | 8.62e-07 | 3 |
alveolar sac | 8.62e-07 | 3 |
alveolar wall | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.22e-09 | 2 |
lung adenocarcinoma | 1.44e-09 | 2 |
clear cell adenocarcinoma | 1.86e-09 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.