FFCP PHASE1:Mm9::chr2:32208832..32208844,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=13429|HGNC=|MCL_coexpression_id=1|UniProt=P39053|association_with_transcript=4bp_to_ENSMUST00000139624_5end|description=CAGE_peak_3_at_Dnm1_5end|id=chr2:32208832..32208844,-|ontology_enrichment_celltype=CL:0000117!2.75e-10!23;CL:0000337!2.75e-10!23|ontology_enrichment_celltype_v019_2=CL:0000117,6.69e-11,23;CL:0000337,6.69e-11,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.28e-15!52;UBERON:0005068!4.28e-15!52;UBERON:0006241!4.28e-15!52;UBERON:0007135!4.28e-15!52;UBERON:0000955!2.54e-14!50;UBERON:0006238!2.54e-14!50;UBERON:0000033!2.82e-14!63;UBERON:0002020!3.88e-14!34;UBERON:0002616!1.01e-13!49;UBERON:0002346!4.17e-13!71;UBERON:0003075!4.17e-13!71;UBERON:0007284!4.17e-13!71;UBERON:0001017!6.90e-13!73;UBERON:0005743!6.90e-13!73;UBERON:0003056!2.07e-12!49;UBERON:0000073!4.88e-12!75;UBERON:0001016!4.88e-12!75;UBERON:0003080!1.10e-11!40;UBERON:0002791!1.32e-11!29;UBERON:0003528!1.32e-11!29;UBERON:0001893!1.32e-11!29;UBERON:0002780!3.99e-11!39;UBERON:0001890!3.99e-11!39;UBERON:0006240!3.99e-11!39;UBERON:0004121!1.15e-10!102;UBERON:0000924!1.15e-10!102;UBERON:0006601!1.15e-10!102;UBERON:0002021!3.90e-08!10;UBERON:0000411!3.90e-08!10;UBERON:0001950!3.90e-08!10;UBERON:0000956!9.26e-08!21;UBERON:0001869!9.26e-08!21;UBERON:0000203!9.26e-08!21;UBERON:0002619!6.78e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.44e-18,54;UBERON:0001049,6.45e-17,52;UBERON:0005068,6.45e-17,52;UBERON:0006241,6.45e-17,52;UBERON:0007135,6.45e-17,52;UBERON:0002346,4.93e-16,64;UBERON:0003075,4.93e-16,64;UBERON:0007284,4.93e-16,64;UBERON:0002020,1.59e-15,34;UBERON:0000955,2.86e-14,47;UBERON:0006238,2.86e-14,47;UBERON:0010371,5.66e-14,73;UBERON:0002616,1.22e-13,46;UBERON:0003056,1.43e-13,49;UBERON:0001017,1.48e-13,73;UBERON:0003080,8.11e-13,40;UBERON:0003528,8.51e-13,29;UBERON:0002791,8.51e-13,29;UBERON:0001893,8.51e-13,29;UBERON:0001016,1.79e-12,75;UBERON:0002780,3.27e-12,39;UBERON:0001890,3.27e-12,39;UBERON:0006240,3.27e-12,39;UBERON:0004121,4.86e-12,95;UBERON:0000924,4.86e-12,95;UBERON:0006601,4.86e-12,95;UBERON:0000160,2.76e-09,31;UBERON:0000956,1.20e-08,21;UBERON:0001869,1.20e-08,21;UBERON:0000203,1.20e-08,21;UBERON:0002021,1.34e-08,10;UBERON:0000411,1.34e-08,10;UBERON:0001950,1.34e-08,10;UBERON:0002619,9.79e-08,17|phase1_expression=1.76163731815273,11.8651638597383,20.4749657725291,23.5922084819327,23.5420993074783,5.37213670118047,5.60670337429262,0,0,0,0,0,0,0,0,0,0,0,0,0,6.63337663178344,0.0992909512008853,0.261199789138935,5.11975752938901,3.89995777814189,11.4846392823004,8.61523992318149,8.18790684206378,5.70070258369122,3.2763916868791,4.21287970245079,0,0.61506478758457,0,2.02196133825892,2.65975432573588,2.24586291888606,0,0,0,0,0,0,1.51076181570693,1.52065396829272,2.20256102594018,0,0,0,0,1.95980990275508,0,0,0,0,0.514518872071894,0.85960031981627,0.515672092277442,12.1389876515759,14.2827564403449,12.6766280701236,1.35537812827653,0.889294796111139,0,0,0,0,0.384218305321555,3.52544681848824,3.10513658162888,3.36519938162211,16.8534080798244,15.9025349485162,4.04219637409348,5.17565543498476,3.67687514644008,27.5289702498472,21.9622221506523,23.6554061214615,8.70449499019279,12.2593442427229,6.77187381723788,25.1264699101243,17.4456409109821,20.0165704587621,17.0884579574727,16.0879999302986,13.2343606535963,0.454357159999104,0.453429360640713,0.579728977403356,0,0,0,0,0,1.68533304158102,2.55645483867087,1.55871602761721,2.12003744706204,0.704217098883403,1.28326477414318,0,0,0,0,0,2.16949371466214,0.258937883647172,2.3750742250372,1.56136794089522,0.608930956624282,0.922461989024234,0.753613202763113,0.705532242814229,1.0053327306374,1.23597483867187,1.44599356919912,0,2.10296904931632,1.54589062922275,2.90925151881133,1.86391761218122,26.3502717310392,24.5052646971742,6.38642638021478,0,0,0,26.9623150928681,29.2800385803921,14.3245961408665,35.807809959609,44.7502050328078,21.6099566341943,33.7461827180936,2.03678727700633,1.11966273549084,0.505445516867349,5.47148825304832,1.56144531555244,1.37941262660084,2.34080768746954,2.10986744970001,2.65342346690179,3.45907044769094,3.65436725782942,10.8655415710387,2.80238390812695,4.9167580843633,7.5658983390498,4.16471891612392,5.56094498451196,4.87553033131033,5.76189981942242,3.18454826909589,0,0,0,0.621377317606506,0.938104239924385,0.180062061461015,0.946978942340841,0.983821158737019,0,0.232533944750408,0.536546802799238,0.350296027101508,0.987359099480883,0.820837320395476,1.05389452409612,1.02339991197733,0.878200461164203,0.671032093801859,37.2213208958505,7.20332286654991,15.5296828002385,5.55346189993443,0.639864751605702,2.09013004674395,2.19074684247559,5.24377164020691,5.33707305227689,7.60902504450237,5.69434873853414,7.24675400785648,7.54005626400809,10.7436494902221,9.16331209459865,12.5834717211591,6.26800344636613,6.77080329064848,0.758671603812327,0.913988100877831,2.25415471346161,0.814605311381257,1.35766741017338,0.771494018793504,0.885311519739602,0.442830443938806,0.3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| ||
|EntrezGene=13429 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=P39053 | |||
|association_with_transcript=4bp_to_ENSMUST00000139624_5end | |||
|description=CAGE_peak_3_at_Dnm1_5end | |||
|id=chr2:32208832..32208844,- | |||
|ontology_enrichment_celltype=CL:0000117!2.75e-10!23;CL:0000337!2.75e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.69e-11,23;CL:0000337,6.69e-11,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.28e-15!52;UBERON:0005068!4.28e-15!52;UBERON:0006241!4.28e-15!52;UBERON:0007135!4.28e-15!52;UBERON:0000955!2.54e-14!50;UBERON:0006238!2.54e-14!50;UBERON:0000033!2.82e-14!63;UBERON:0002020!3.88e-14!34;UBERON:0002616!1.01e-13!49;UBERON:0002346!4.17e-13!71;UBERON:0003075!4.17e-13!71;UBERON:0007284!4.17e-13!71;UBERON:0001017!6.90e-13!73;UBERON:0005743!6.90e-13!73;UBERON:0003056!2.07e-12!49;UBERON:0000073!4.88e-12!75;UBERON:0001016!4.88e-12!75;UBERON:0003080!1.10e-11!40;UBERON:0002791!1.32e-11!29;UBERON:0003528!1.32e-11!29;UBERON:0001893!1.32e-11!29;UBERON:0002780!3.99e-11!39;UBERON:0001890!3.99e-11!39;UBERON:0006240!3.99e-11!39;UBERON:0004121!1.15e-10!102;UBERON:0000924!1.15e-10!102;UBERON:0006601!1.15e-10!102;UBERON:0002021!3.90e-08!10;UBERON:0000411!3.90e-08!10;UBERON:0001950!3.90e-08!10;UBERON:0000956!9.26e-08!21;UBERON:0001869!9.26e-08!21;UBERON:0000203!9.26e-08!21;UBERON:0002619!6.78e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.44e-18,54;UBERON:0001049,6.45e-17,52;UBERON:0005068,6.45e-17,52;UBERON:0006241,6.45e-17,52;UBERON:0007135,6.45e-17,52;UBERON:0002346,4.93e-16,64;UBERON:0003075,4.93e-16,64;UBERON:0007284,4.93e-16,64;UBERON:0002020,1.59e-15,34;UBERON:0000955,2.86e-14,47;UBERON:0006238,2.86e-14,47;UBERON:0010371,5.66e-14,73;UBERON:0002616,1.22e-13,46;UBERON:0003056,1.43e-13,49;UBERON:0001017,1.48e-13,73;UBERON:0003080,8.11e-13,40;UBERON:0003528,8.51e-13,29;UBERON:0002791,8.51e-13,29;UBERON:0001893,8.51e-13,29;UBERON:0001016,1.79e-12,75;UBERON:0002780,3.27e-12,39;UBERON:0001890,3.27e-12,39;UBERON:0006240,3.27e-12,39;UBERON:0004121,4.86e-12,95;UBERON:0000924,4.86e-12,95;UBERON:0006601,4.86e-12,95;UBERON:0000160,2.76e-09,31;UBERON:0000956,1.20e-08,21;UBERON:0001869,1.20e-08,21;UBERON:0000203,1.20e-08,21;UBERON:0002021,1.34e-08,10;UBERON:0000411,1.34e-08,10;UBERON:0001950,1.34e-08,10;UBERON:0002619,9.79e-08,17 | |||
|phase1_expression=1.76163731815273,11.8651638597383,20.4749657725291,23.5922084819327,23.5420993074783,5.37213670118047,5.60670337429262,0,0,0,0,0,0,0,0,0,0,0,0,0,6.63337663178344,0.0992909512008853,0.261199789138935,5.11975752938901,3.89995777814189,11.4846392823004,8.61523992318149,8.18790684206378,5.70070258369122,3.2763916868791,4.21287970245079,0,0.61506478758457,0,2.02196133825892,2.65975432573588,2.24586291888606,0,0,0,0,0,0,1.51076181570693,1.52065396829272,2.20256102594018,0,0,0,0,1.95980990275508,0,0,0,0,0.514518872071894,0.85960031981627,0.515672092277442,12.1389876515759,14.2827564403449,12.6766280701236,1.35537812827653,0.889294796111139,0,0,0,0,0.384218305321555,3.52544681848824,3.10513658162888,3.36519938162211,16.8534080798244,15.9025349485162,4.04219637409348,5.17565543498476,3.67687514644008,27.5289702498472,21.9622221506523,23.6554061214615,8.70449499019279,12.2593442427229,6.77187381723788,25.1264699101243,17.4456409109821,20.0165704587621,17.0884579574727,16.0879999302986,13.2343606535963,0.454357159999104,0.453429360640713,0.579728977403356,0,0,0,0,0,1.68533304158102,2.55645483867087,1.55871602761721,2.12003744706204,0.704217098883403,1.28326477414318,0,0,0,0,0,2.16949371466214,0.258937883647172,2.3750742250372,1.56136794089522,0.608930956624282,0.922461989024234,0.753613202763113,0.705532242814229,1.0053327306374,1.23597483867187,1.44599356919912,0,2.10296904931632,1.54589062922275,2.90925151881133,1.86391761218122,26.3502717310392,24.5052646971742,6.38642638021478,0,0,0,26.9623150928681,29.2800385803921,14.3245961408665,35.807809959609,44.7502050328078,21.6099566341943,33.7461827180936,2.03678727700633,1.11966273549084,0.505445516867349,5.47148825304832,1.56144531555244,1.37941262660084,2.34080768746954,2.10986744970001,2.65342346690179,3.45907044769094,3.65436725782942,10.8655415710387,2.80238390812695,4.9167580843633,7.5658983390498,4.16471891612392,5.56094498451196,4.87553033131033,5.76189981942242,3.18454826909589,0,0,0,0.621377317606506,0.938104239924385,0.180062061461015,0.946978942340841,0.983821158737019,0,0.232533944750408,0.536546802799238,0.350296027101508,0.987359099480883,0.820837320395476,1.05389452409612,1.02339991197733,0.878200461164203,0.671032093801859,37.2213208958505,7.20332286654991,15.5296828002385,5.55346189993443,0.639864751605702,2.09013004674395,2.19074684247559,5.24377164020691,5.33707305227689,7.60902504450237,5.69434873853414,7.24675400785648,7.54005626400809,10.7436494902221,9.16331209459865,12.5834717211591,6.26800344636613,6.77080329064848,0.758671603812327,0.913988100877831,2.25415471346161,0.814605311381257,1.35766741017338,0.771494018793504,0.885311519739602,0.442830443938806,0.31399745568275,0.740382983530803,0,0.500535317148282,0.589676985339609,0.449724224769707,0.202860121388503,0,0.50925170356284,0,0.486405680325106,0,0,0.744281895337007,0,0.252578877947112,0,0,1.66277871149944,0.568474235311454,1.30371981153621,1.01847051465113,0.938760993154008,0.837531287209079,1.19021820443007,1.56106918286239,1.10344600874334,1.99318220683897,1.2756381492599,0.81931657357869,0.863424909329478,0.867894351489069,0,1.08781136763742,0,0.551873492609465,26.3302967579979,23.090702258664,5.40985319743029,1.26235463602186,0.94652465824877,0.780877488593277,1.07711698866399,0,0.891194696329576,0.566153061577665,0.404810701674894,0.876767573733936,1.58115111178609,33.4174169078679,1.70328102249922,2.67098405500883,2.93196526836437,1.64970122972535,0,1.94224508923985,0.906970670894253,0.565815239267694,1.47650946440386,1.53717573971964,3.10113951801865,0.363533729477506,1.42598951353889,0.948110273807448,3.16255825724996,0,2.04263763452273,1.08036656418786,1.29358683782755,1.07168517515796,1.41872186913819,1.42695054081656,2.46823530903181,2.74018454203139,0.23467170806371,0.21183207086382,0.661585194164886,1.48397627647332,2.58343082713449,2.11095237248546,1.90995750405018,1.80554989719567,14.8655226681224,22.0656109392507,0.170870880797853,1.857481811669,1.48155621895769,0.188368457004691,0.410082683163076,0,0,0,0,0,1.89801596148681,2.23651413839534,1.72808545314882,1.88179466413022,2.40198820120795,1.07891477107857,1.07449492442937,0.26175594198403,1.55537967950151,1.24267862617385,5.6369293868419,1.04661582230785,1.48912641411388,2.72231663681667,0.774958940866387,2.02747350588934,2.46450201156083,0.651021924219751,0.734015410979976,1.20792060413003,2.30424005006292,0,0.608175645870493,0.205421914329655,0.51968329191118,0.358053391334963,0,0,0.147689527174577,0.201932899896295,0.228620419965,0.100826185136841,0,0.0962118416403295,0,1.58711268530648,0.443971906748129,0.269141569828427,0.335769232728157,1.54551675225752,0.93841237725591,1.64836461840539,1.07184189539533,0,41.7916363536629,42.3499217586603,40.6755814541972,40.3854978507666,29.4585483501376,35.5035131773159,39.1513050134447,42.3301931030767,44.8610984894363,36.7609821343792,1.03787347584177,5.58634822761443,3.24393850932855,2.43106717068294,3.14419743941973,2.38996560985018,3.11145418922261,3.70863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| |||
|short_description=p3@Dnm1 | |||
}} |
Revision as of 23:47, 13 September 2013
Short description: | p3@Dnm1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Dnm1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 4bp_to_ENSMUST00000139624_5end |
EntrezGene: | Dnm1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.69e-11 | 23 |
neuroblast (sensu Vertebrata) | 6.69e-11 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 3.44e-18 | 54 |
neural tube | 6.45e-17 | 52 |
neural rod | 6.45e-17 | 52 |
future spinal cord | 6.45e-17 | 52 |
neural keel | 6.45e-17 | 52 |
neurectoderm | 4.93e-16 | 64 |
neural plate | 4.93e-16 | 64 |
presumptive neural plate | 4.93e-16 | 64 |
gray matter | 1.59e-15 | 34 |
brain | 2.86e-14 | 47 |
future brain | 2.86e-14 | 47 |
ecto-epithelium | 5.66e-14 | 73 |
regional part of brain | 1.22e-13 | 46 |
pre-chordal neural plate | 1.43e-13 | 49 |
central nervous system | 1.48e-13 | 73 |
anterior neural tube | 8.11e-13 | 40 |
brain grey matter | 8.51e-13 | 29 |
regional part of telencephalon | 8.51e-13 | 29 |
telencephalon | 8.51e-13 | 29 |
nervous system | 1.79e-12 | 75 |
regional part of forebrain | 3.27e-12 | 39 |
forebrain | 3.27e-12 | 39 |
future forebrain | 3.27e-12 | 39 |
ectoderm-derived structure | 4.86e-12 | 95 |
ectoderm | 4.86e-12 | 95 |
presumptive ectoderm | 4.86e-12 | 95 |
intestine | 2.76e-09 | 31 |
cerebral cortex | 1.20e-08 | 21 |
cerebral hemisphere | 1.20e-08 | 21 |
pallium | 1.20e-08 | 21 |
occipital lobe | 1.34e-08 | 10 |
visual cortex | 1.34e-08 | 10 |
neocortex | 1.34e-08 | 10 |
regional part of cerebral cortex | 9.79e-08 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.