FFCP PHASE1:Mm9::chr2:30700830..30700843,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20204|HGNC=|UniProt=A2APZ7,Q06348|association_with_transcript=-43bp_to_NM_009116,uc008jcy.2_5end|description=CAGE_peak_4_at_Prrx2_5end|id=chr2:30700830..30700843,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002453,7.87e-10,8;CL:0000333,1.04e-07,10;CL:0000095,1.04e-07,10;CL:0000243,1.04e-07,10;CL:0000123,1.04e-07,10;CL:0000125,1.04e-07,10;CL:0000030,1.04e-07,10;CL:0000339,1.04e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002102,1.84e-12,7;UBERON:0004710,1.84e-12,7;UBERON:0005419,1.84e-12,7;UBERON:0005417,1.84e-12,7;UBERON:0005729,1.84e-12,7;UBERON:0010708,8.59e-11,8;UBERON:0000026,6.69e-07,12;UBERON:0004708,6.69e-07,12;UBERON:0002101,6.69e-07,12;UBERON:0004357,6.69e-07,12;UBERON:0004347,6.69e-07,12;UBERON:0005732,6.69e-07,12;UBERON:0005733,6.69e-07,12|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0.367093504323363,8.60630478782843,0,1.75748946187577,0.388859798148567,1.53985063787899,4.31257693094915,0,0,0,0,0.286533439938757,0,0,0,0,3.38844532069132,3.55717918444456,0.449949858640699,0.988866362566974,0.7104801149461,1.79760066311043,1.15265491596466,0.103689612308478,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0.151452386666368,0,0,0,0,0,0,0,0,1.36344258062446,3.11743205523443,2.47337702157238,0,1.28326477414318,0,0,1.5154372870785,1.52015919285059,0.505524445014783,0.11418387971906,0,0.148442139064825,0.693941307064543,0,0,0.150722640552623,0,0,0,0,0,0.647067399789637,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0.611036183101898,0.497627882440372,0.252722758433675,0,0.390361328888111,0.919608417733892,0.900310649026746,0.452114453507145,0.408218994907967,0.2562274405697,0.187403449119458,0.258703370739016,8.62271971731369,5.29497024469894,4.57472922826267,3.72632745126877,1.94633074457919,2.43776516565517,0.823128545631774,1.39323986772945,0,0,0,3.10688658803253,1.87620847984877,1.98068267607116,0.710234206755631,1.37734962223183,0.771335564436891,0.232533944750408,0.536546802799238,0,0,0,0,0,0.219550115291051,0,0,0.102904612379284,0,0,0,0.696710015581316,0,0,0.444756087689741,0,0,0,0,0,0,0,0,0,0.379335801906163,0.456994050438915,1.1270773567308,0.407302655690628,0,0.280543279561274,0.189709611372772,0,0,0.246794327843601,0,0.333690211432188,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,1.32643988239339,1.30371981153621,0.339490171550376,0.234690248288502,0,0,0,0,0,0.637819074629948,0,0,0,0,0,0,0,0,0,3.77050374366353,0.252470927204373,0.315508219416257,0,0,0,0,0,0,0,0,0.321321316421807,0.709700426041343,0.890328018336276,0.977321756121456,0.659880491890142,0,0,0.302323556964751,0,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0.643011105094777,0.532020700926821,1.60531935841864,0.987294123612726,1.2178597964584,0.23467170806371,0,0.220528398054962,0.16488625294148,0.322928853391811,1.02531972377865,0.358117032009409,0.492422699235184,0,0,0.170870880797853,0.412773735926445,0.740778109478847,0,0.136694227721025,0,0,0,0,0,0.474503990371703,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0,0.26175594198403,0.129614973291793,0,0,0.598066184175915,0.66183396182839,1.55560950675238,0.774958940866387,1.18269287843545,1.05621514781179,1.5624526181274,0,0,0,0,0.608175645870493,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.221985953374065,0.0897138566094757,0.335769232728157,0.19318959403219,0,0.549454872801795,0,0,0,0,0,0,0,0,0,0,0,0,1.3492355185943,0,2.90247129782028,0.729320151204882,0.209613162627982,1.10306105070008,0.222246727801615,0.412070114477788,0.64183841918363,0.505394423527595,0.760437899670719,0.377252682772152,0.655490552289177,0.576226371643824,0.287177344778066,0.476293691283074,0.115884325944855,0.192909220463705,0.412085900803307,0.883193520806384,0.342869252385415,0.532427418478012,1.1921809497366,0.290692833264657,0.0941093804153306,0.507687647350059,0.548783918618318,0,0.814824683075171,0.561142271657738,0.830445126869219,0.29551344712669,0.409231043169689,0.154936841185966,0.385813221962283,0.999242311751784,0.467863216890817,0.214871054048298,1.14772999241306,0,0.231867835620421|short_description=p4@Prrx2}} | ||
|EntrezGene=20204 | |||
|HGNC= | |||
|UniProt=A2APZ7,Q06348 | |||
|association_with_transcript=-43bp_to_NM_009116,uc008jcy.2_5end | |||
|description=CAGE_peak_4_at_Prrx2_5end | |||
|id=chr2:30700830..30700843,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,7.87e-10,8;CL:0000333,1.04e-07,10;CL:0000095,1.04e-07,10;CL:0000243,1.04e-07,10;CL:0000123,1.04e-07,10;CL:0000125,1.04e-07,10;CL:0000030,1.04e-07,10;CL:0000339,1.04e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002102,1.84e-12,7;UBERON:0004710,1.84e-12,7;UBERON:0005419,1.84e-12,7;UBERON:0005417,1.84e-12,7;UBERON:0005729,1.84e-12,7;UBERON:0010708,8.59e-11,8;UBERON:0000026,6.69e-07,12;UBERON:0004708,6.69e-07,12;UBERON:0002101,6.69e-07,12;UBERON:0004357,6.69e-07,12;UBERON:0004347,6.69e-07,12;UBERON:0005732,6.69e-07,12;UBERON:0005733,6.69e-07,12 | |||
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0.367093504323363,8.60630478782843,0,1.75748946187577,0.388859798148567,1.53985063787899,4.31257693094915,0,0,0,0,0.286533439938757,0,0,0,0,3.38844532069132,3.55717918444456,0.449949858640699,0.988866362566974,0.7104801149461,1.79760066311043,1.15265491596466,0.103689612308478,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0.151452386666368,0,0,0,0,0,0,0,0,1.36344258062446,3.11743205523443,2.47337702157238,0,1.28326477414318,0,0,1.5154372870785,1.52015919285059,0.505524445014783,0.11418387971906,0,0.148442139064825,0.693941307064543,0,0,0.150722640552623,0,0,0,0,0,0.647067399789637,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0.611036183101898,0.497627882440372,0.252722758433675,0,0.390361328888111,0.919608417733892,0.900310649026746,0.452114453507145,0.408218994907967,0.2562274405697,0.187403449119458,0.258703370739016,8.62271971731369,5.29497024469894,4.57472922826267,3.72632745126877,1.94633074457919,2.43776516565517,0.823128545631774,1.39323986772945,0,0,0,3.10688658803253,1.87620847984877,1.98068267607116,0.710234206755631,1.37734962223183,0.771335564436891,0.232533944750408,0.536546802799238,0,0,0,0,0,0.219550115291051,0,0,0.102904612379284,0,0,0,0.696710015581316,0,0,0.444756087689741,0,0,0,0,0,0,0,0,0,0.379335801906163,0.456994050438915,1.1270773567308,0.407302655690628,0,0.280543279561274,0.189709611372772,0,0,0.246794327843601,0,0.333690211432188,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,1.32643988239339,1.30371981153621,0.339490171550376,0.234690248288502,0,0,0,0,0,0.637819074629948,0,0,0,0,0,0,0,0,0,3.77050374366353,0.252470927204373,0.315508219416257,0,0,0,0,0,0,0,0,0.321321316421807,0.709700426041343,0.890328018336276,0.977321756121456,0.659880491890142,0,0,0.302323556964751,0,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0.643011105094777,0.532020700926821,1.60531935841864,0.987294123612726,1.2178597964584,0.23467170806371,0,0.220528398054962,0.16488625294148,0.322928853391811,1.02531972377865,0.358117032009409,0.492422699235184,0,0,0.170870880797853,0.412773735926445,0.740778109478847,0,0.136694227721025,0,0,0,0,0,0.474503990371703,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0,0.26175594198403,0.129614973291793,0,0,0.598066184175915,0.66183396182839,1.55560950675238,0.774958940866387,1.18269287843545,1.05621514781179,1.5624526181274,0,0,0,0,0.608175645870493,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.221985953374065,0.0897138566094757,0.335769232728157,0.19318959403219,0,0.549454872801795,0,0,0,0,0,0,0,0,0,0,0,0,1.3492355185943,0,2.90247129782028,0.729320151204882,0.209613162627982,1.10306105070008,0.222246727801615,0.412070114477788,0.64183841918363,0.505394423527595,0.760437899670719,0.377252682772152,0.655490552289177,0.576226371643824,0.287177344778066,0.476293691283074,0.115884325944855,0.192909220463705,0.412085900803307,0.883193520806384,0.342869252385415,0.532427418478012,1.1921809497366,0.290692833264657,0.0941093804153306,0.507687647350059,0.548783918618318,0,0.814824683075171,0.561142271657738,0.830445126869219,0.29551344712669,0.409231043169689,0.154936841185966,0.385813221962283,0.999242311751784,0.467863216890817,0.214871054048298,1.14772999241306,0,0.231867835620421 | |||
|short_description=p4@Prrx2 | |||
}} |
Revision as of 23:42, 13 September 2013
Short description: | p4@Prrx2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Prrx2_5end |
Coexpression cluster: | NA |
Association with transcript: | -43bp_to_NM_009116, uc008jcy.2_5end |
EntrezGene: | Prrx2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 7.87e-10 | 8 |
migratory neural crest cell | 1.04e-07 | 10 |
neuron associated cell | 1.04e-07 | 10 |
glial cell (sensu Vertebrata) | 1.04e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 1.04e-07 | 10 |
glial cell | 1.04e-07 | 10 |
glioblast | 1.04e-07 | 10 |
glioblast (sensu Vertebrata) | 1.04e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
forelimb | 1.84e-12 | 7 |
pectoral appendage | 1.84e-12 | 7 |
pectoral appendage bud | 1.84e-12 | 7 |
forelimb bud | 1.84e-12 | 7 |
forelimb/pectoral fin field | 1.84e-12 | 7 |
pectoral complex | 8.59e-11 | 8 |
appendage | 6.69e-07 | 12 |
paired limb/fin | 6.69e-07 | 12 |
limb | 6.69e-07 | 12 |
paired limb/fin bud | 6.69e-07 | 12 |
limb bud | 6.69e-07 | 12 |
limb/fin field | 6.69e-07 | 12 |
limb field | 6.69e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.