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FFCP PHASE1:Mm9::chr2:30270822..30270888,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=12908|HGNC=|MCL_coexpression_id=1314|UniProt=A2AWE5|association_with_transcript=0bp_to_ENSMUST00000129494_5end|description=CAGE_peak_3_at_Crat_5end|id=chr2:30270822..30270888,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!6.26e-09!25;UBERON:0002330!6.26e-09!25;UBERON:0009854!2.21e-08!23;UBERON:0009856!2.21e-08!23;UBERON:0002107!2.72e-08!22;UBERON:0007499!2.72e-08!22;UBERON:0006925!2.72e-08!22;UBERON:0009497!2.72e-08!22;UBERON:0000015!2.72e-08!22;UBERON:0002423!2.72e-08!22;UBERON:0006235!2.72e-08!22;UBERON:0008835!2.72e-08!22;UBERON:0003894!2.72e-08!22;UBERON:0004161!2.72e-08!22;UBERON:0008836!2.72e-08!22|ontology_enrichment_uberon_v019_2=UBERON:0002365,2.19e-09,25;UBERON:0002330,2.19e-09,25;UBERON:0009854,9.00e-09,23;UBERON:0009856,9.00e-09,23;UBERON:0002107,1.16e-08,22;UBERON:0007499,1.16e-08,22;UBERON:0006925,1.16e-08,22;UBERON:0009497,1.16e-08,22;UBERON:0000015,1.16e-08,22;UBERON:0002423,1.16e-08,22;UBERON:0006235,1.16e-08,22;UBERON:0008835,1.16e-08,22;UBERON:0003894,1.16e-08,22;UBERON:0004161,1.16e-08,22;UBERON:0008836,1.16e-08,22;UBERON:0000160,3.99e-08,31;UBERON:0000344,7.00e-07,15|phase1_expression=0.160148847104794,105.390573107087,115.114807565553,161.515888837847,175.313505481222,18.298840638396,12.8486952327539,0,0,0,0,0,0,0,0.333109761815663,1.01237633694913,0.699561878128147,0,0.411343300817216,0.42438965179803,12.5864069423583,0.0992909512008853,0,34.7183557461693,19.9586074528438,57.997428375617,54.2760115160434,34.0444547643705,17.8622014288991,24.6989527164732,4.8780712344167,0,0,0,2.02196133825892,2.32728503501889,1.22501613757421,0.418531630736908,0,0.523523743973798,1.17646297606203,0.683045484958446,0,0.251793635951155,0.304130793658544,0,1.56478268869608,1.52617609466313,1.75748946187577,1.74986909166855,1.39986421625363,1.43752564364972,0,0,0,0.257259436035947,0.85960031981627,0.515672092277442,0.404632921719196,0,0,1.0165335962074,0,0.449949858640699,0.988866362566974,0.7104801149461,0.599200221036809,0.384218305321555,0.103689612308478,0.405017814995072,0.630974884054146,0.856952953211411,0.662605622854841,0,0.191690942036473,0,0,0.638436690425939,1.38245879930619,0.131886287730194,0.365950574409639,0.52091337055676,1.11673199600552,0.56276261003168,1.37518422999129,0,0.427115042397309,0.372798891650601,0.075726193333184,1.058001841495,0.869593466105033,12.0459342777394,6.79971333707751,32.382191498269,63.0283124924239,27.3296401129375,45.3635477025558,2.38602451609281,1.55871602761721,1.41335829804136,0.422530259330042,0,0,0,0.216491041011214,0,0,73.7627862985127,2.58937883647172,18.1099409659086,0.346970653532272,0,0.922461989024234,0.753613202763113,3.29248379979973,54.7906338197385,6.92145909656247,392.58725403756,6.19227386364912,9.38247729694973,13.471332626084,6.78825354389311,5.59175283654366,1.75668478206928,1.8850203613211,34.7421595083684,0,0,0,1.3481157546434,0.915001205637253,0.125654352112864,0.869121600961382,0.255715457330331,1.24672826735736,0.973447578406546,0.101839363850316,10.9478134136882,0.505445516867349,181.400879774141,0,0,0,0.150704817835715,0.204109497453984,0.896796041993948,0.0937017245597288,38.0293954986353,0,0.189106080167819,0.175951124163949,0.43839146485515,0,0,0.823128545631774,0,0,0.257347907114715,0,0.207125772535502,0.234526059981096,0.720248245844059,0.23674473558521,1.18058539048442,0.925602677324269,3.48800917125612,2.95100741539581,5.3712057488898,10.6963902443762,20.5209330098869,24.5638492923943,18.1287984407412,21.515911298523,25.9018388207517,1.05144974282064,0.205809224758569,158.270597049239,182.735341564509,0,0.232236671860439,0.128867461322093,1.4117846723634,1.11189021922435,3.04361001780095,68.3321848624097,8.89374355509659,5.27803938480566,5.37182474511107,6.04388670069272,52.1315257019448,44.9567143739364,57.5518279705121,0,0.114248512609729,2.25415471346161,2.44381593414377,2.52138233317913,5.61086559122549,4.61626721007078,20.2225902732055,21.5088257142683,45.2867591593008,85.0819039740117,1.50160595144485,1.57247196090562,2.69834534861824,3.65148218499305,7.71766911207734,8.40265310878685,26.1803485080238,85.6073997372187,66.9929848178919,51.7565543498476,96.7566463938109,63.6556853153704,57.5879841719415,40.5438154559522,79.6031810249556,2.21703828199926,0,0,0,0.234690248288502,0.335012514883631,2.61848004974615,1.56106918286239,1.7339865851681,1.7717175171902,4.14582398509466,7.53771247692395,6.38934432903814,3.03763023021174,0,0.54390568381871,14.2611639175521,15.1765210467603,0.481651769963376,1.17211686592203,0.491804836130026,57.8158423298014,0,0,0,0.955875191810208,0.891194696329576,0.566153061577665,0,0.292255857911312,0.395287777946524,0.321321316421807,6.38730383437209,0.712262414669021,0.162886959353576,0.494910368917606,0,0,0.302323556964751,0.565815239267694,0.295301892880773,0.614870295887855,3.6179961043551,0.363533729477506,1.42598951353889,2.21225730555071,3.16255825724996,0,0.340439605753788,0.36012218806262,0.258717367565509,0,0.177340233642274,0.178368817602071,0.329098041204242,0,0.23467170806371,0.63549621259146,1.10264199027481,15.8290802823821,10.4951877352339,18.2748162532312,18.6220856644893,17.2347944732314,50.717665573594,1.29797711407357,0.683483523191411,0,0.370389054739423,0.376736914009382,0.27338845544205,0.915112692826091,0.169978429993855,0.139951452323658,0,5.72802370809068,0,0.203319467126849,0.324016022465404,0,0.436725127492355,5.12484516262319,13.2245529160537,4.71160695571253,5.4438288782553,8.69875038321696,17.4744810992099,0,0.165458490457098,0.388902376688095,0,0,0.234714477291508,2.0832701575032,1.25831213310853,3.8653459332161,12.3852902690882,5.05617793005085,0,0.102710957164827,0,0,1.19208812868759,0.841368146639782,1.18151621739662,3.23092639834072,1.37172251979,2.41982844328417,1.16949456887703,0.481059208201647,1.8700304349051,13.1503622496823,0.443971906748129,0,0.167884616364078,5.40930863290133,0.750729901804728,0.36630324853453,1.71494703263253,2.00628841614145,2.25900737046827,1.38097570952153,0,0.68741272937475,0,0,0.675022500231806,1.35096360967266,1.35942722695261,0.51776031175182,0,0.399024873401031,0.170733605754134,1.70174701947806,1.67690530102386,7.90527086335061,15.3350242183115,19.3672953804561,14.4413644316317,17.436107611702,20.5318232911094,16.9763707247469,16.8554713445788,17.6069169113391,20.3895914792427,20.0043350338891,18.1938391733423,15.046919196169,17.7196937345422,16.1918812147837,16.8005933668854,12.9557338496316,15.7367885365232,17.0055307459824,16.4691415726829,16.0767754994185,20.3050049888778,16.8364615320219,16.4322977753493,16.2731258780744,18.5070628273712,17.2382844157236,15.9600106836179,20.1417893541756,6.94463799532109,4.49659040288303,15.2055545489515,36.0983370801141,28.6932498103265,40.3682296988713,56.3438840557624|short_description=p3@Crat}}
|EntrezGene=12908
|HGNC=
|MCL_coexpression_id=1314
|UniProt=A2AWE5
|association_with_transcript=0bp_to_ENSMUST00000129494_5end
|description=CAGE_peak_3_at_Crat_5end
|id=chr2:30270822..30270888,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002365!6.26e-09!25;UBERON:0002330!6.26e-09!25;UBERON:0009854!2.21e-08!23;UBERON:0009856!2.21e-08!23;UBERON:0002107!2.72e-08!22;UBERON:0007499!2.72e-08!22;UBERON:0006925!2.72e-08!22;UBERON:0009497!2.72e-08!22;UBERON:0000015!2.72e-08!22;UBERON:0002423!2.72e-08!22;UBERON:0006235!2.72e-08!22;UBERON:0008835!2.72e-08!22;UBERON:0003894!2.72e-08!22;UBERON:0004161!2.72e-08!22;UBERON:0008836!2.72e-08!22
|ontology_enrichment_uberon_v019_2=UBERON:0002365,2.19e-09,25;UBERON:0002330,2.19e-09,25;UBERON:0009854,9.00e-09,23;UBERON:0009856,9.00e-09,23;UBERON:0002107,1.16e-08,22;UBERON:0007499,1.16e-08,22;UBERON:0006925,1.16e-08,22;UBERON:0009497,1.16e-08,22;UBERON:0000015,1.16e-08,22;UBERON:0002423,1.16e-08,22;UBERON:0006235,1.16e-08,22;UBERON:0008835,1.16e-08,22;UBERON:0003894,1.16e-08,22;UBERON:0004161,1.16e-08,22;UBERON:0008836,1.16e-08,22;UBERON:0000160,3.99e-08,31;UBERON:0000344,7.00e-07,15
|phase1_expression=0.160148847104794,105.390573107087,115.114807565553,161.515888837847,175.313505481222,18.298840638396,12.8486952327539,0,0,0,0,0,0,0,0.333109761815663,1.01237633694913,0.699561878128147,0,0.411343300817216,0.42438965179803,12.5864069423583,0.0992909512008853,0,34.7183557461693,19.9586074528438,57.997428375617,54.2760115160434,34.0444547643705,17.8622014288991,24.6989527164732,4.8780712344167,0,0,0,2.02196133825892,2.32728503501889,1.22501613757421,0.418531630736908,0,0.523523743973798,1.17646297606203,0.683045484958446,0,0.251793635951155,0.304130793658544,0,1.56478268869608,1.52617609466313,1.75748946187577,1.74986909166855,1.39986421625363,1.43752564364972,0,0,0,0.257259436035947,0.85960031981627,0.515672092277442,0.404632921719196,0,0,1.0165335962074,0,0.449949858640699,0.988866362566974,0.7104801149461,0.599200221036809,0.384218305321555,0.103689612308478,0.405017814995072,0.630974884054146,0.856952953211411,0.662605622854841,0,0.191690942036473,0,0,0.638436690425939,1.38245879930619,0.131886287730194,0.365950574409639,0.52091337055676,1.11673199600552,0.56276261003168,1.37518422999129,0,0.427115042397309,0.372798891650601,0.075726193333184,1.058001841495,0.869593466105033,12.0459342777394,6.79971333707751,32.382191498269,63.0283124924239,27.3296401129375,45.3635477025558,2.38602451609281,1.55871602761721,1.41335829804136,0.422530259330042,0,0,0,0.216491041011214,0,0,73.7627862985127,2.58937883647172,18.1099409659086,0.346970653532272,0,0.922461989024234,0.753613202763113,3.29248379979973,54.7906338197385,6.92145909656247,392.58725403756,6.19227386364912,9.38247729694973,13.471332626084,6.78825354389311,5.59175283654366,1.75668478206928,1.8850203613211,34.7421595083684,0,0,0,1.3481157546434,0.915001205637253,0.125654352112864,0.869121600961382,0.255715457330331,1.24672826735736,0.973447578406546,0.101839363850316,10.9478134136882,0.505445516867349,181.400879774141,0,0,0,0.150704817835715,0.204109497453984,0.896796041993948,0.0937017245597288,38.0293954986353,0,0.189106080167819,0.175951124163949,0.43839146485515,0,0,0.823128545631774,0,0,0.257347907114715,0,0.207125772535502,0.234526059981096,0.720248245844059,0.23674473558521,1.18058539048442,0.925602677324269,3.48800917125612,2.95100741539581,5.3712057488898,10.6963902443762,20.5209330098869,24.5638492923943,18.1287984407412,21.515911298523,25.9018388207517,1.05144974282064,0.205809224758569,158.270597049239,182.735341564509,0,0.232236671860439,0.128867461322093,1.4117846723634,1.11189021922435,3.04361001780095,68.3321848624097,8.89374355509659,5.27803938480566,5.37182474511107,6.04388670069272,52.1315257019448,44.9567143739364,57.5518279705121,0,0.114248512609729,2.25415471346161,2.44381593414377,2.52138233317913,5.61086559122549,4.61626721007078,20.2225902732055,21.5088257142683,45.2867591593008,85.0819039740117,1.50160595144485,1.57247196090562,2.69834534861824,3.65148218499305,7.71766911207734,8.40265310878685,26.1803485080238,85.6073997372187,66.9929848178919,51.7565543498476,96.7566463938109,63.6556853153704,57.5879841719415,40.5438154559522,79.6031810249556,2.21703828199926,0,0,0,0.234690248288502,0.335012514883631,2.61848004974615,1.56106918286239,1.7339865851681,1.7717175171902,4.14582398509466,7.53771247692395,6.38934432903814,3.03763023021174,0,0.54390568381871,14.2611639175521,15.1765210467603,0.481651769963376,1.17211686592203,0.491804836130026,57.8158423298014,0,0,0,0.955875191810208,0.891194696329576,0.566153061577665,0,0.292255857911312,0.395287777946524,0.321321316421807,6.38730383437209,0.712262414669021,0.162886959353576,0.494910368917606,0,0,0.302323556964751,0.565815239267694,0.295301892880773,0.614870295887855,3.6179961043551,0.363533729477506,1.42598951353889,2.21225730555071,3.16255825724996,0,0.340439605753788,0.36012218806262,0.258717367565509,0,0.177340233642274,0.178368817602071,0.329098041204242,0,0.23467170806371,0.63549621259146,1.10264199027481,15.8290802823821,10.4951877352339,18.2748162532312,18.6220856644893,17.2347944732314,50.717665573594,1.29797711407357,0.683483523191411,0,0.370389054739423,0.376736914009382,0.27338845544205,0.915112692826091,0.169978429993855,0.139951452323658,0,5.72802370809068,0,0.203319467126849,0.324016022465404,0,0.436725127492355,5.12484516262319,13.2245529160537,4.71160695571253,5.4438288782553,8.69875038321696,17.4744810992099,0,0.165458490457098,0.388902376688095,0,0,0.234714477291508,2.0832701575032,1.25831213310853,3.8653459332161,12.3852902690882,5.05617793005085,0,0.102710957164827,0,0,1.19208812868759,0.841368146639782,1.18151621739662,3.23092639834072,1.37172251979,2.41982844328417,1.16949456887703,0.481059208201647,1.8700304349051,13.1503622496823,0.443971906748129,0,0.167884616364078,5.40930863290133,0.750729901804728,0.36630324853453,1.71494703263253,2.00628841614145,2.25900737046827,1.38097570952153,0,0.68741272937475,0,0,0.675022500231806,1.35096360967266,1.35942722695261,0.51776031175182,0,0.399024873401031,0.170733605754134,1.70174701947806,1.676905301023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|short_description=p3@Crat
}}

Revision as of 23:41, 13 September 2013

Short description:p3@Crat
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Crat_5end
Coexpression cluster:MCL_coexpression_mm9:1314
Association with transcript: 0bp_to_ENSMUST00000129494_5end
EntrezGene:Crat
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Crat

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5105.39
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6115.11
CD326+ enterocyte, pool1.CNhs13542.11848-124I3161.52
CD326+ enterocyte, pool2.CNhs13197.11849-124I4175.31
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I718.30
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I812.85
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D134.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D219.96
GP2+ M cell, pool1.CNhs13228.11845-124H958.00
GP2+ M cell, pool2.CNhs13231.11846-124I154.28
GP2+ M cell, pool3.CNhs13240.11847-124I234.04
Ileum epithelium, pool1.CNhs13199.10252-104B917.86
Ileum epithelium, pool2.CNhs13232.10253-104C124.70
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F712.05
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.80
Mouse hepatocyte, donor3.CNhs12615.11637-122C832.38
Mouse hepatocyte, donor6.CNhs13090.11822-124F463.03
Mouse hepatocyte, donor8.CNhs13091.11824-124F627.33
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A745.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B673.76
accessory axillary lymph node, adult.CNhs10475.1063-29H92.59
adrenal gland, adult.CNhs10508.49-24D718.11
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C13.29
adrenal gland, neonate N25.CNhs11223.1377-27I354.79
amnion, adult pregnant day17.5.CNhs10488.583-22A86.92
aorta, adult.CNhs10498.46-23H1392.59
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F59.38
bone (os femoris), neonate N16.CNhs11225.1525-43A613.47
bone (os femoris), neonate N20.CNhs11195.1350-25C36.79
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H734.74
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A210.95
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G4181.40
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A238.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E53.49
heart, embryo E18.CNhs11030.1283-20G32.95
heart, neonate N00.CNhs11213.639-21E35.37
heart, neonate N03.CNhs11221.1349-25I210.70
heart, neonate N10.CNhs11118.749-24G120.52
heart, neonate N16.CNhs11209.782-15G124.56
heart, neonate N20.CNhs11127.821-26I618.13
heart, neonate N25.CNhs11196.1351-25D321.52
heart, neonate N30.CNhs11202.1390-42D225.90
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I3158.27
intestine, adult.CNhs10496.178-9A3182.74
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F73.04
intestine, neonate N00.CNhs11126.644-26D168.33
intestine, neonate N01.CNhs11192.1322-23E98.89
intestine, neonate N06.CNhs11102.688-20B85.28
intestine, neonate N07.CNhs11095.720-20F25.37
intestine, neonate N10.CNhs11098.755-23A56.04
intestine, neonate N20.CNhs11187.827-18D152.13
intestine, neonate N25.CNhs11121.1352-25E344.96
intestine, neonate N30.CNhs11131.1384-42G157.55
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C72.52
kidney, neonate N00.CNhs11214.646-21G75.61
kidney, neonate N10.CNhs11206.758-6D54.62
kidney, neonate N20.CNhs11113.832-19I120.22
kidney, neonate N25.CNhs11122.1353-25F321.51
kidney, neonate N30.CNhs11203.1385-42H145.29
liver, adult pregnant day01.CNhs10466.508-5B285.08
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D73.65
liver, embryo E16.CNhs10523.462-17F57.72
liver, embryo E17.CNhs10510.481-18A38.40
liver, embryo E18.CNhs10579.499-43G426.18
liver, neonate N00.CNhs11117.641-24F485.61
liver, neonate N03.CNhs11123.1345-25G266.99
liver, neonate N06.CNhs11101.684-20A851.76
liver, neonate N07.CNhs11103.716-20H296.76
liver, neonate N10.CNhs11115.751-24B963.66
liver, neonate N20.CNhs11220.823-25A357.59
liver, neonate N25.CNhs11198.1368-26H140.54
liver, neonate N30.CNhs11106.1382-42D179.60
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I62.62
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E51.73
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E64.15
lung, neonate N20.CNhs11109.822-18A47.54
lung, neonate N25.CNhs11119.1359-25C76.39
lung, neonate N30.CNhs11133.1394-42H23.04
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B614.26
mammary gland, adult pregnant day19.CNhs10476.588-5H215.18
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A31.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C257.82
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I76.39
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G93.62
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C315.83
skin, neonate N00.CNhs11124.650-25G410.50
skin, neonate N03.CNhs11215.662-22H318.27
skin, neonate N06.CNhs11097.693-20I518.62
skin, neonate N10.CNhs11108.762-6C417.23
small intestine, neonate N16.CNhs11114.790-21I150.72
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B85.12
stomach, neonate N07.CNhs11210.718-18A913.22
stomach, neonate N25.CNhs11104.1355-25E44.71
stomach, neonate N30.CNhs11134.1386-42I15.44
submandibular gland, adult.CNhs10469.59-29C18.70
testis, adult.CNhs10504.57-7G517.47
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I42.08
testis, neonate N10.CNhs11204.763-44D91.26
testis, neonate N20.CNhs11110.839-18H33.87
testis, neonate N30.CNhs11130.1391-42E212.39
thymus, adult.CNhs10471.38-12B55.06
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C43.23
thymus, neonate N07.CNhs11211.713-19D31.37
thymus, neonate N10.CNhs11194.748-24E42.42
thymus, neonate N20.CNhs11186.820-7A21.17
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G21.87
tongue, adult.CNhs10499.32-1B413.15
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E45.41
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F27.91
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G515.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G519.37
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G514.44
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G517.44
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G520.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G516.98
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G516.86
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G517.61
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G520.39
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G520.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G518.19
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G515.05
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G517.72
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G516.19
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G516.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G512.96
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G515.74
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G517.01
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G516.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G516.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G520.31
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G516.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G516.43
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G516.27
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G518.51
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G517.24
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G515.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G520.14
whole body, embryo E17.5.CNhs10513.490-9F96.94
whole body, embryo E17.CNhs10517.475-3I54.50
whole body, embryo E18.CNhs10516.493-3B315.21
whole body, neonate N00.CNhs10525.657-19C236.10
whole body, neonate N01.CNhs10576.659-23C628.69
whole body, neonate N06.CNhs10515.692-21D140.37
whole body, neonate N10.CNhs10518.761-6B456.34





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
exocrine gland2.19e-0925
exocrine system2.19e-0925
digestive tract diverticulum9.00e-0923
sac9.00e-0923
liver1.16e-0822
epithelial sac1.16e-0822
digestive gland1.16e-0822
epithelium of foregut-midgut junction1.16e-0822
anatomical boundary1.16e-0822
hepatobiliary system1.16e-0822
foregut-midgut junction1.16e-0822
hepatic diverticulum1.16e-0822
liver primordium1.16e-0822
septum transversum1.16e-0822
liver bud1.16e-0822
intestine3.99e-0831
mucosa7.00e-0715







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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