FFCP PHASE1:Hg19::chr7:134618292..134618302,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=800|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=1441|TSSclassifier=N|UniProt=|association_with_transcript=223bp_to_BX648808_5end|coexpression_cluster_id=C48|description=CAGE_peak_40_at_CALD1_5end|id=chr7:134618292..134618302,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0007297;1.11e-09;2!UBERON:0006603;2.57e-08;65|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!6.24e-17!115;UBERON:0000062!7.37e-09!511;UBERON:0000468!3.31e-07!659|ontology_enrichment_uberon_v019=UBERON:0005904;1.13e-17;4!UBERON:0006947;5.76e-14;3!UBERON:0004054;5.76e-14;3!UBERON:0003135;8.36e-10;11!UBERON:0005409;4.24e-08;22!UBERON:0000160;7.75e-08;17!UBERON:0000058;4.20e-07;10!UBERON:0004175;8.20e-07;21!UBERON:0003978;9.18e-07;3!UBERON:0000946;9.18e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0005904,6.80e-18,4;UBERON:0006947,3.75e-14,3;UBERON:0004054,3.75e-14,3;UBERON:0007023,1.47e-10,114;UBERON:0003135,6.71e-10,11;UBERON:0004797,8.51e-10,7;UBERON:0000160,5.85e-08,17;UBERON:0005409,3.84e-07,25;UBERON:0003978,7.75e-07,3;UBERON:0009751,7.75e-07,3;UBERON:0000946,7.75e-07,3;UBERON:0002523,7.75e-07,3;UBERON:0005983,7.75e-07,3;UBERON:0002165,7.75e-07,3;UBERON:0002062,7.75e-07,3;UBERON:0007280,7.75e-07,3|phase1_expression=0,0.214100523890983,0.422863212287913,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0,0,0.136874425072884,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0.472674085820339,0.886917589850256,0.175669571386252,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0.12663051166458,1.19168262731897,1.14734648299525,0,0,0,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0.989067717114227,0,0,0,0,0,0.438977620880838,0,0.300476117813194,0.113432183160021,1.61450672119976,0.213557388818567,0.211931901159562,0.300091096084402,0,1.03056216018252,0.37223371266318,0.843881661206331,0,0.252433774244115,0.184099797284599,0.161646056818812,1.06502877754984,0.10075209822764,0.339121184620975,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0.237270619111097,0,0,0.769494313892781,0,0,0,0,0,0,1.77236972004421,0,0,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0.845302752556,1.32969058292435,2.08014873822732,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0.301439377059586,0,0.799783929456456,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,1.66376689224646,2.49800584316026,0.788512075169673,0.585707074963566,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0.248107807818777,1.99500565274481,0.841980283299221,0.256278298511402,0,1.12597744800525,0,0.308419387605311,0,0.0821271560138091,0,0.232420756919918,0,0.200506470303285,0,0,0.182091168006717,0.655622074797121,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.515205058238611,0.183138929636687,0.165018999841176,0,0,1.6068392984416,0,0,0,0.137836572484531,0.322260734604821,0.145016693914229,0.170453254832202,0.267096106940212,0,0,0.255225424989168,0,0,0.62962469366128,0,0,0,0,0,0,0,0.316379424718726,0.38126038784765,0,0,0,0,0.719489830333259,0,0.235624804691373,0,0,0,0,0,0,0.409499734223957,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0.658589785919804,0.379473173765715,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0,0.111308705022906,0,0.211125408127993,3.98495976502139,0.828851746593443,0,0.20453736500431,0,0.311039587661807,0.0898683511473268,0,0,8.18740266786549,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.442317039724898,0,0.438770794307945,0.10893846351899,0,2.6163087891291,0,0.23056390438806,0.179515288819544,0.325942115766024,0.638002319463839,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0.489698424477443,0,0,2.98578579323551,1.68069372556344,1.83309043480088,0,0,0,0,0,0,0,0,0.242780379534093,7.89168805698781,0,0,1.26373159256976,0,0,0,0,0,0,0,0.277349346026277,0,0,0,1.7472666824203,0,0.0967563312890851,0.219267951258557,0.164230914106418,4.84945082442097,0.264768380074501,1.12990370390266,0,0,0.189932387867636,0.195551382734803,0,1.70762395791482,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=800 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1441 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=223bp_to_BX648808_5end | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_40_at_CALD1_5end | |||
|id=chr7:134618292..134618302,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.11e-09;2!UBERON:0006603;2.57e-08;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.24e-17!115;UBERON:0000062!7.37e-09!511;UBERON:0000468!3.31e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0005904;1.13e-17;4!UBERON:0006947;5.76e-14;3!UBERON:0004054;5.76e-14;3!UBERON:0003135;8.36e-10;11!UBERON:0005409;4.24e-08;22!UBERON:0000160;7.75e-08;17!UBERON:0000058;4.20e-07;10!UBERON:0004175;8.20e-07;21!UBERON:0003978;9.18e-07;3!UBERON:0000946;9.18e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005904,6.80e-18,4;UBERON:0006947,3.75e-14,3;UBERON:0004054,3.75e-14,3;UBERON:0007023,1.47e-10,114;UBERON:0003135,6.71e-10,11;UBERON:0004797,8.51e-10,7;UBERON:0000160,5.85e-08,17;UBERON:0005409,3.84e-07,25;UBERON:0003978,7.75e-07,3;UBERON:0009751,7.75e-07,3;UBERON:0000946,7.75e-07,3;UBERON:0002523,7.75e-07,3;UBERON:0005983,7.75e-07,3;UBERON:0002165,7.75e-07,3;UBERON:0002062,7.75e-07,3;UBERON:0007280,7.75e-07,3 | |||
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| |||
|short_description=p40@CALD1 | |||
}} |
Revision as of 23:22, 13 September 2013
Short description: | p40@CALD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_40_at_CALD1_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | 223bp_to_BX648808_5end |
EntrezGene: | CALD1 |
HGNC: | 1441 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct of male reproductive system | 6.80e-18 | 4 |
male genital duct | 3.75e-14 | 3 |
internal male genitalia | 3.75e-14 | 3 |
adult organism | 1.47e-10 | 114 |
male reproductive organ | 6.71e-10 | 11 |
blood vessel layer | 8.51e-10 | 7 |
intestine | 5.85e-08 | 17 |
gastrointestinal system | 3.84e-07 | 25 |
valve | 7.75e-07 | 3 |
cardiac mesenchyme | 7.75e-07 | 3 |
cardial valve | 7.75e-07 | 3 |
tunica intima | 7.75e-07 | 3 |
heart layer | 7.75e-07 | 3 |
endocardium | 7.75e-07 | 3 |
endocardial cushion | 7.75e-07 | 3 |
presumptive endocardium | 7.75e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.