FFCP PHASE1:Hg19::chr7:134430188..134430202,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=800|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1441|TSSclassifier=S|UniProt=C9J813|association_with_transcript=-15bp_to_ENST00000436461_5end|coexpression_cluster_id=C2878|description=CAGE_peak_59_at_CALD1_5end|id=chr7:134430188..134430202,+|ontology_enrichment_celltype=CL:0002334!1.17e-10!12;CL:0002579!1.31e-09!3;CL:0002580!2.15e-09!3;CL:0002617!7.03e-07!2|ontology_enrichment_celltype_v019=CL:0002579;3.61e-31;3!CL:0002580;1.65e-30;3!CL:0002334;7.99e-30;12!CL:0002617;3.13e-21;2!CL:0000136;1.17e-12;13!CL:0000222;3.81e-11;1!CL:0002616;3.81e-11;1|ontology_enrichment_celltype_v019_2=CL:0002579,2.95e-31,3;CL:0002580,1.83e-30,3;CL:0002334,7.61e-30,12;CL:0002617,3.47e-21,2;CL:0002616,2.68e-11,1;CL:0000136,4.94e-11,15|ontology_enrichment_development_v019=UBERON:0010115;3.81e-11;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.56e-19!115;UBERON:0003688!5.57e-12!6;UBERON:0002358!5.57e-12!6;UBERON:0003684!5.57e-12!6;UBERON:0001178!5.57e-12!6;UBERON:0001443!7.31e-12!11;UBERON:0004457!7.27e-11!12;UBERON:0000042!7.27e-11!12;UBERON:0000310!7.94e-10!10;UBERON:0002323!4.30e-07!46|ontology_enrichment_uberon_v019=UBERON:0003688;1.72e-27;6!UBERON:0002358;1.72e-27;6!UBERON:0003684;1.72e-27;6!UBERON:0001178;1.72e-27;6!UBERON:0000310;5.46e-25;10!UBERON:0001443;1.02e-22;11!UBERON:0004457;1.97e-18;9!UBERON:0000042;1.97e-18;9!UBERON:0002106;2.68e-14;3!UBERON:0002363;3.81e-11;1!UBERON:0000996;3.81e-11;1!UBERON:0004458;2.00e-10;48!UBERON:0002553;3.74e-09;52!UBERON:0002323;4.90e-09;45!UBERON:0004177;6.07e-09;5!UBERON:0005057;6.07e-09;5|ontology_enrichment_uberon_v019_2=UBERON:0004457,6.22e-30,12;UBERON:0000042,6.22e-30,12;UBERON:0003688,1.46e-27,6;UBERON:0002358,1.46e-27,6;UBERON:0003684,1.46e-27,6;UBERON:0001178,1.46e-27,6;UBERON:0000310,6.04e-25,10;UBERON:0001443,1.12e-22,11;UBERON:0002106,3.62e-14,3;UBERON:0004854,3.62e-14,3;UBERON:0009034,3.62e-14,3;UBERON:0002095,3.62e-14,3;UBERON:0004782,3.62e-14,3;UBERON:0003281,3.62e-14,3;UBERON:0009664,3.62e-14,3;UBERON:0002296,3.62e-14,3;UBERON:0005602,3.62e-14,3;UBERON:0001179,3.62e-14,3;UBERON:0006293,3.62e-14,3;UBERON:0002323,5.24e-13,46;UBERON:0004458,3.74e-12,49;UBERON:0000996,3.63e-11,1;UBERON:0002363,4.01e-11,1;UBERON:0007645,4.01e-11,1;UBERON:0007647,4.01e-11,1;UBERON:0010115,4.01e-11,1;UBERON:0003886,6.12e-11,54;UBERON:0002553,1.42e-09,61;UBERON:0009569,3.13e-09,112;UBERON:0004923,7.29e-09,66|phase1_expression=3.08853244759946,2.35510576280081,4.22863212287913,0,0.446961094427288,1.74467704820074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12750493267896,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0.500170521059677,0,0.623912584592421,0,0.473107245101804,1.7571212248907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24053903909388,10.8958001034524,1.68396056659844,6.15067916427365,3.58195074346692,2.41280881715411,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0.276283915531148,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.442317039724898,0,0,0,0,0.230850775511391,0,0,0,0,0,4.21348929648567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,1.26373159256976,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665574309221114,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,1.19428766609585,0,0.343395705182793,0,1.26184898228651,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0.161475645631851,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=800 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1441 | |||
|TSSclassifier=S | |||
|UniProt=C9J813 | |||
|association_with_transcript=-15bp_to_ENST00000436461_5end | |||
|coexpression_cluster_id=C2878 | |||
|description=CAGE_peak_59_at_CALD1_5end | |||
|id=chr7:134430188..134430202,+ | |||
|ontology_enrichment_celltype=CL:0002334!1.17e-10!12;CL:0002579!1.31e-09!3;CL:0002580!2.15e-09!3;CL:0002617!7.03e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002579;3.61e-31;3!CL:0002580;1.65e-30;3!CL:0002334;7.99e-30;12!CL:0002617;3.13e-21;2!CL:0000136;1.17e-12;13!CL:0000222;3.81e-11;1!CL:0002616;3.81e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,2.95e-31,3;CL:0002580,1.83e-30,3;CL:0002334,7.61e-30,12;CL:0002617,3.47e-21,2;CL:0002616,2.68e-11,1;CL:0000136,4.94e-11,15 | |||
|ontology_enrichment_development_v019=UBERON:0010115;3.81e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.56e-19!115;UBERON:0003688!5.57e-12!6;UBERON:0002358!5.57e-12!6;UBERON:0003684!5.57e-12!6;UBERON:0001178!5.57e-12!6;UBERON:0001443!7.31e-12!11;UBERON:0004457!7.27e-11!12;UBERON:0000042!7.27e-11!12;UBERON:0000310!7.94e-10!10;UBERON:0002323!4.30e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.72e-27;6!UBERON:0002358;1.72e-27;6!UBERON:0003684;1.72e-27;6!UBERON:0001178;1.72e-27;6!UBERON:0000310;5.46e-25;10!UBERON:0001443;1.02e-22;11!UBERON:0004457;1.97e-18;9!UBERON:0000042;1.97e-18;9!UBERON:0002106;2.68e-14;3!UBERON:0002363;3.81e-11;1!UBERON:0000996;3.81e-11;1!UBERON:0004458;2.00e-10;48!UBERON:0002553;3.74e-09;52!UBERON:0002323;4.90e-09;45!UBERON:0004177;6.07e-09;5!UBERON:0005057;6.07e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004457,6.22e-30,12;UBERON:0000042,6.22e-30,12;UBERON:0003688,1.46e-27,6;UBERON:0002358,1.46e-27,6;UBERON:0003684,1.46e-27,6;UBERON:0001178,1.46e-27,6;UBERON:0000310,6.04e-25,10;UBERON:0001443,1.12e-22,11;UBERON:0002106,3.62e-14,3;UBERON:0004854,3.62e-14,3;UBERON:0009034,3.62e-14,3;UBERON:0002095,3.62e-14,3;UBERON:0004782,3.62e-14,3;UBERON:0003281,3.62e-14,3;UBERON:0009664,3.62e-14,3;UBERON:0002296,3.62e-14,3;UBERON:0005602,3.62e-14,3;UBERON:0001179,3.62e-14,3;UBERON:0006293,3.62e-14,3;UBERON:0002323,5.24e-13,46;UBERON:0004458,3.74e-12,49;UBERON:0000996,3.63e-11,1;UBERON:0002363,4.01e-11,1;UBERON:0007645,4.01e-11,1;UBERON:0007647,4.01e-11,1;UBERON:0010115,4.01e-11,1;UBERON:0003886,6.12e-11,54;UBERON:0002553,1.42e-09,61;UBERON:0009569,3.13e-09,112;UBERON:0004923,7.29e-09,66 | |||
|phase1_expression=3.08853244759946,2.35510576280081,4.22863212287913,0,0.446961094427288,1.74467704820074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12750493267896,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0.500170521059677,0,0.623912584592421,0,0.473107245101804,1.7571212248907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24053903909388,10.8958001034524,1.68396056659844,6.15067916427365,3.58195074346692,2.41280881715411,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0.276283915531148,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.442317039724898,0,0,0,0,0.230850775511391,0,0,0,0,0,4.21348929648567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,1.26373159256976,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665574309221114,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,1.19428766609585,0,0.343395705182793,0,1.26184898228651,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,1.72983755203292,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0.496211178389294,0,0,0,0,0.606965604236632,0,0.354809480650555,0,0,0,0.0657727735628491,0,0,0.235479278551542,0,0,0.913158720509496,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0.588925401344836,0,0,0,3.28943712929488,1.03132620757723,0,0,0,0,0,0,0,0,0,0,0,0,0.924351257262837,0.865253124247578,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0.0645889098360061,0,0,0.12729431655633,0,0.217716747896961,0,0,0.286888821570705,0,0,0,0,0,0,0,0,1.33151354837103,0,0 | |||
|short_description=p59@CALD1 | |||
}} |
Revision as of 23:21, 13 September 2013
Short description: | p59@CALD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_59_at_CALD1_5end |
Coexpression cluster: | C2878_Preadipocyte_spleen_Adipocyte_ovary_chorionic_Mesenchymal_dura |
Association with transcript: | -15bp_to_ENST00000436461_5end |
EntrezGene: | CALD1 |
HGNC: | 1441 |
UniProt: | C9J813 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 2.95e-31 | 3 |
preadipocyte of the breast | 1.83e-30 | 3 |
preadipocyte | 7.61e-30 | 12 |
adipocyte of breast | 3.47e-21 | 2 |
perirenal adipocyte cell | 2.68e-11 | 1 |
fat cell | 4.94e-11 | 15 |
Ontology term | p-value | n |
---|---|---|
cavity lining | 6.22e-30 | 12 |
serous membrane | 6.22e-30 | 12 |
omentum | 1.46e-27 | 6 |
peritoneum | 1.46e-27 | 6 |
abdominal cavity | 1.46e-27 | 6 |
visceral peritoneum | 1.46e-27 | 6 |
breast | 6.04e-25 | 10 |
chest | 1.12e-22 | 11 |
spleen | 3.62e-14 | 3 |
gastrointestinal system mesentery | 3.62e-14 | 3 |
stomach region | 3.62e-14 | 3 |
mesentery | 3.62e-14 | 3 |
gastrointestinal system serosa | 3.62e-14 | 3 |
mesentery of stomach | 3.62e-14 | 3 |
gut mesentery | 3.62e-14 | 3 |
dorsal mesentery | 3.62e-14 | 3 |
dorsal mesogastrium | 3.62e-14 | 3 |
peritoneal cavity | 3.62e-14 | 3 |
spleen primordium | 3.62e-14 | 3 |
body cavity | 5.24e-13 | 46 |
body cavity or lining | 3.74e-12 | 49 |
vagina | 3.63e-11 | 1 |
dura mater | 4.01e-11 | 1 |
future meninx | 4.01e-11 | 1 |
ectomeninx | 4.01e-11 | 1 |
future dura mater | 4.01e-11 | 1 |
body cavity precursor | 6.12e-11 | 54 |
anatomical cavity | 1.42e-09 | 61 |
subdivision of trunk | 3.13e-09 | 112 |
organ component layer | 7.29e-09 | 66 |
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