FFCP PHASE1:Mm9::chr2:172377022..172377035,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=161|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:172377022..172377035,+|id=chr2:172377022..172377035,+|ontology_enrichment_celltype=CL:0000349!1.70e-09!3;CL:0000351!1.70e-09!3|ontology_enrichment_celltype_v019_2=CL:0000349,1.10e-52,3;CL:0000351,1.10e-52,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003100!2.77e-11!11;UBERON:0000358!1.70e-09!3;UBERON:0000307!1.70e-09!3;UBERON:0003975!4.38e-09!5;UBERON:0000014!1.01e-08!5;UBERON:0001003!1.01e-08!5;UBERON:0002097!1.01e-08!5;UBERON:0002199!1.01e-08!5;UBERON:0007029!1.01e-08!5;UBERON:0007376!1.01e-08!5;UBERON:0002416!1.01e-08!5;UBERON:0007383!1.01e-08!5;UBERON:0005085!1.82e-08!13;UBERON:0003134!2.99e-08!8;UBERON:0000474!2.74e-07!9;UBERON:0001987!9.12e-07!2;UBERON:0003124!9.12e-07!2;UBERON:0004340!9.12e-07!2;UBERON:0005795!9.20e-07!4;UBERON:0000995!9.20e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.10e-52,3;UBERON:0000307,1.10e-52,3;UBERON:0007010,1.10e-52,3;UBERON:0001987,5.06e-10,2;UBERON:0003124,5.06e-10,2;UBERON:0004340,5.06e-10,2;UBERON:0005631,4.17e-07,3;UBERON:0000478,4.17e-07,3;UBERON:0000158,4.17e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.631325567659422,0.130120442962704,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11204537257339,0.847328283455281,0,0,1.29171541356724,0.120625849856312,0.238744688006273,0.820704498725306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0.25984164595559,0,0,0,0,0,0,0,0,0,0,0,1.10992976687032,3.13998498133165,3.18980771091749,0.19318959403219,0.187682475451182,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0.441182838239031,0|short_description=p@chr2:172377022..172377035,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=161 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:172377022..172377035,+ | |||
|id=chr2:172377022..172377035,+ | |||
|ontology_enrichment_celltype=CL:0000349!1.70e-09!3;CL:0000351!1.70e-09!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.10e-52,3;CL:0000351,1.10e-52,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003100!2.77e-11!11;UBERON:0000358!1.70e-09!3;UBERON:0000307!1.70e-09!3;UBERON:0003975!4.38e-09!5;UBERON:0000014!1.01e-08!5;UBERON:0001003!1.01e-08!5;UBERON:0002097!1.01e-08!5;UBERON:0002199!1.01e-08!5;UBERON:0007029!1.01e-08!5;UBERON:0007376!1.01e-08!5;UBERON:0002416!1.01e-08!5;UBERON:0007383!1.01e-08!5;UBERON:0005085!1.82e-08!13;UBERON:0003134!2.99e-08!8;UBERON:0000474!2.74e-07!9;UBERON:0001987!9.12e-07!2;UBERON:0003124!9.12e-07!2;UBERON:0004340!9.12e-07!2;UBERON:0005795!9.20e-07!4;UBERON:0000995!9.20e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.10e-52,3;UBERON:0000307,1.10e-52,3;UBERON:0007010,1.10e-52,3;UBERON:0001987,5.06e-10,2;UBERON:0003124,5.06e-10,2;UBERON:0004340,5.06e-10,2;UBERON:0005631,4.17e-07,3;UBERON:0000478,4.17e-07,3;UBERON:0000158,4.17e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.631325567659422,0.130120442962704,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11204537257339,0.847328283455281,0,0,1.29171541356724,0.120625849856312,0.238744688006273,0.820704498725306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0.25984164595559,0,0,0,0,0,0,0,0,0,0,0,1.10992976687032,3.13998498133165,3.18980771091749,0.19318959403219,0.187682475451182,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0.441182838239031,0 | |||
|short_description=p@chr2:172377022..172377035,+ | |||
}} |
Revision as of 23:04, 13 September 2013
Short description: | p@chr2:172377022..172377035, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:172377022..172377035, + |
Coexpression cluster: | MCL_coexpression_mm9:161 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.10e-52 | 3 |
trophoblast cell | 1.10e-52 | 3 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 1.10e-52 | 3 |
blastula | 1.10e-52 | 3 |
cleaving embryo | 1.10e-52 | 3 |
placenta | 5.06e-10 | 2 |
chorion | 5.06e-10 | 2 |
allantois | 5.06e-10 | 2 |
extraembryonic membrane | 4.17e-07 | 3 |
extraembryonic structure | 4.17e-07 | 3 |
membranous layer | 4.17e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.