FFCP PHASE1:Hg19::chr7:116139560..116139571,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=858|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1528|TSSclassifier=S|UniProt=P51636,Q53X57|association_with_transcript=-83bp_to_NM_001206747,NM_001233,NM_198212_5end|description=CAGE_peak_13_at_CAV2_5end|id=chr7:116139560..116139571,+|ontology_enrichment_celltype=CL:0000066!9.09e-09!254;CL:0002368!1.64e-07!13;CL:0000076!4.88e-07!62;CL:0002076!8.41e-07!43|ontology_enrichment_celltype_v019=CL:0002202;5.93e-15;9!CL:0002632;5.93e-15;9!CL:0002537;2.51e-12;5!CL:0002368;1.54e-10;13!CL:0000054;2.00e-08;2!CL:0000137;2.00e-08;2!CL:0000092;2.00e-08;2!CL:0000082;2.59e-07;19|ontology_enrichment_celltype_v019_2=CL:0002202,6.85e-15,9;CL:0002632,6.85e-15,9;CL:0002537,2.67e-12,5;CL:0002368,1.70e-10,13;CL:0000054,2.48e-08,2;CL:0000137,2.48e-08,2;CL:0000092,2.48e-08,2;CL:0000082,2.43e-07,19|ontology_enrichment_development_v019=UBERON:0010226;1.54e-15;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:200;2.00e-08;2!DOID:4305;2.00e-08;2!DOID:3910;2.00e-08;2|ontology_enrichment_disease_v019_2=DOID:3910,1.86e-08,2;DOID:200,2.48e-08,2;DOID:4305,2.48e-08,2|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002084;1.54e-15;1!UBERON:0002082;1.54e-15;1!UBERON:0007196;3.30e-09;15!UBERON:0001558;3.30e-09;15!UBERON:0000305;4.56e-09;7!UBERON:0004903;2.00e-08;2!UBERON:0002173;2.00e-08;2!UBERON:0002186;2.00e-08;2!UBERON:0004802;2.59e-07;19!UBERON:0000115;2.59e-07;19|ontology_enrichment_uberon_v019_2=UBERON:0002084,1.16e-15,1;UBERON:0002082,1.16e-15,1;UBERON:0010226,1.16e-15,1;UBERON:0007196,3.59e-09,15;UBERON:0001558,3.59e-09,15;UBERON:0000305,4.76e-09,7;UBERON:0004903,1.86e-08,2;UBERON:0002173,1.86e-08,2;UBERON:0002186,1.86e-08,2;UBERON:0004871,5.00e-08,8;UBERON:0004802,2.43e-07,19;UBERON:0000115,2.43e-07,19;UBERON:0005178,5.11e-07,34;UBERON:0002224,5.11e-07,34;UBERON:0005181,8.02e-07,35|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0.261185628199839,0,1.39560233594486,0.218441372130172,0.263766978228454,0,0.662794751455832,0,0,0,0,0.246242116153576,0.612002073732759,0,0.286235987131057,0,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0.275118041940067,0,0,0,0,0,0.760272105718513,0.24406205754817,0.367663080345869,0,0.267899184852239,0.22452937262617,0.225222960966644,0,0,0.183201743930407,0,0,0.436094052142534,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.469737994575059,0,0.140450806702248,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0.113432183160021,0,0.213557388818567,0,0,0.206105058476878,0,0.18611685633159,0.168776332241266,0.194874010322397,0,0.184099797284599,0.323292113637624,0,0.10075209822764,0,0.193260853163297,0.545492241181669,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0,0,0.118306800039844,0,0,0,0,0.237270619111097,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0.329250856225877,0,0.502644862058154,0.370353780634118,0.325808305310325,0,0,0.115930404975077,0,0.144366447761074,0.462985512576611,0,0.790204397959275,0.858486162094873,0,0,0,0,0.335964256397719,0.283550194484773,0.358234090811393,1.16253575405585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0.845302752556,0,1.04007436911366,0,0,0,0,0,0,0,0,0.791951872933429,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.234282829985426,0,0,0,0.664225598535437,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.384417447767103,0.511707249066704,0.321707842287215,0,0,0,0.164254312027618,0,0.464841513839837,0,0.200506470303285,0,0.229628896329213,0,0,0,0.231046011313244,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0.193341436584244,0.154048617114644,0,0,0.107420244868274,0.290033387828457,0.340906509664404,0,0.661139661443912,0.576570202095319,0,0.2023155617111,0.464845549297286,0,0,0.308033580176089,0.532306030317022,0,0.74129687641568,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.563391205064483,0,0.0982490410131212,0,0,0,0,0,0,0.288666338176536,0.670302275535787,3.26672954583968,0.0941438007767792,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,1.84296421259539,0,0,0,0,0,0,0,0,0,0,0,0.808815160325942,0.179021174675609,0,0.197286811273867,0,0,0,0,0,0,0,0,0.1137934482855,1.27126825146383,0,0,0.583209226766509,0,0,0,0,0,0,0.219385397153973,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=858 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1528 | |||
|TSSclassifier=S | |||
|UniProt=P51636,Q53X57 | |||
|association_with_transcript=-83bp_to_NM_001206747,NM_001233,NM_198212_5end | |||
|description=CAGE_peak_13_at_CAV2_5end | |||
|id=chr7:116139560..116139571,+ | |||
|ontology_enrichment_celltype=CL:0000066!9.09e-09!254;CL:0002368!1.64e-07!13;CL:0000076!4.88e-07!62;CL:0002076!8.41e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0002202;5.93e-15;9!CL:0002632;5.93e-15;9!CL:0002537;2.51e-12;5!CL:0002368;1.54e-10;13!CL:0000054;2.00e-08;2!CL:0000137;2.00e-08;2!CL:0000092;2.00e-08;2!CL:0000082;2.59e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,6.85e-15,9;CL:0002632,6.85e-15,9;CL:0002537,2.67e-12,5;CL:0002368,1.70e-10,13;CL:0000054,2.48e-08,2;CL:0000137,2.48e-08,2;CL:0000092,2.48e-08,2;CL:0000082,2.43e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0010226;1.54e-15;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:200;2.00e-08;2!DOID:4305;2.00e-08;2!DOID:3910;2.00e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,1.86e-08,2;DOID:200,2.48e-08,2;DOID:4305,2.48e-08,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002084;1.54e-15;1!UBERON:0002082;1.54e-15;1!UBERON:0007196;3.30e-09;15!UBERON:0001558;3.30e-09;15!UBERON:0000305;4.56e-09;7!UBERON:0004903;2.00e-08;2!UBERON:0002173;2.00e-08;2!UBERON:0002186;2.00e-08;2!UBERON:0004802;2.59e-07;19!UBERON:0000115;2.59e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,1.16e-15,1;UBERON:0002082,1.16e-15,1;UBERON:0010226,1.16e-15,1;UBERON:0007196,3.59e-09,15;UBERON:0001558,3.59e-09,15;UBERON:0000305,4.76e-09,7;UBERON:0004903,1.86e-08,2;UBERON:0002173,1.86e-08,2;UBERON:0002186,1.86e-08,2;UBERON:0004871,5.00e-08,8;UBERON:0004802,2.43e-07,19;UBERON:0000115,2.43e-07,19;UBERON:0005178,5.11e-07,34;UBERON:0002224,5.11e-07,34;UBERON:0005181,8.02e-07,35 | |||
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| |||
|short_description=p13@CAV2 | |||
}} |
Revision as of 22:50, 13 September 2013
Short description: | p13@CAV2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_CAV2_5end |
Coexpression cluster: | NA |
Association with transcript: | -83bp_to_NM_001206747, NM_001233, NM_198212_5end |
EntrezGene: | CAV2 |
HGNC: | 1528 |
UniProt: | P51636Q53X57 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 6.85e-15 | 9 |
epithelial cell of lower respiratory tract | 6.85e-15 | 9 |
amnion mesenchymal stem cell | 2.67e-12 | 5 |
respiratory epithelial cell | 1.70e-10 | 13 |
bone matrix secreting cell | 2.48e-08 | 2 |
osteocyte | 2.48e-08 | 2 |
osteoclast | 2.48e-08 | 2 |
epithelial cell of lung | 2.43e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 1.16e-15 | 1 |
cardiac ventricle | 1.16e-15 | 1 |
future cardiac ventricle | 1.16e-15 | 1 |
tracheobronchial tree | 3.59e-09 | 15 |
lower respiratory tract | 3.59e-09 | 15 |
amnion | 4.76e-09 | 7 |
bronchoalveolar duct junction | 1.86e-08 | 2 |
alveolar duct | 1.86e-08 | 2 |
bronchiole | 1.86e-08 | 2 |
somatic layer of lateral plate mesoderm | 5.00e-08 | 8 |
respiratory tract epithelium | 2.43e-07 | 19 |
lung epithelium | 2.43e-07 | 19 |
thoracic cavity element | 5.11e-07 | 34 |
thoracic cavity | 5.11e-07 | 34 |
thoracic segment organ | 8.02e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.86e-08 | 2 |
giant cell tumor | 2.48e-08 | 2 |
bone giant cell tumor | 2.48e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.