FFCP PHASE1:Hg19::chr7:106809470..106809481,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=26959|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23200|TSSclassifier=S|UniProt=O60381|association_with_transcript=10bp_to_ENST00000222574,NM_012257,uc003vdy.2_5end|coexpression_cluster_id=C0|description=CAGE_peak_2_at_HBP1_5end|id=chr7:106809470..106809481,+|ontology_enrichment_celltype=CL:0002057!1.46e-24!42;CL:0000860!1.25e-22!45;CL:0000766!5.94e-22!76;CL:0000557!9.45e-19!71;CL:0000738!1.50e-18!140;CL:0000839!4.16e-18!70;CL:0002009!1.08e-16!65;CL:0002194!1.24e-15!63;CL:0000576!1.24e-15!63;CL:0000040!1.24e-15!63;CL:0000559!1.24e-15!63;CL:0002031!1.24e-13!124;CL:0000763!5.19e-12!112;CL:0000049!5.19e-12!112;CL:0002087!1.60e-11!119;CL:0000037!2.32e-11!172;CL:0000566!2.32e-11!172;CL:0000048!6.89e-10!430;CL:0002032!1.09e-09!165;CL:0000837!1.09e-09!165;CL:0000988!2.26e-09!182;CL:0000034!4.76e-09!444;CL:0000723!5.88e-09!436;CL:0000134!1.85e-08!358;CL:0002320!3.16e-08!365;CL:0000094!8.66e-07!8|ontology_enrichment_celltype_v019=CL:0000860;1.36e-29;33!CL:0002057;1.36e-29;33!CL:0000473;1.23e-21;39!CL:0000234;1.23e-21;39!CL:0000576;3.86e-20;48!CL:0000766;6.95e-18;69!CL:0000094;3.91e-10;8!CL:0002087;6.69e-09;104!CL:0000081;2.87e-08;11!CL:0000738;8.61e-08;136!CL:0000624;3.29e-07;6!CL:0000763;4.05e-07;100|ontology_enrichment_celltype_v019_2=CL:0000860,3.78e-39,42;CL:0002057,3.78e-39,42;CL:0000766,4.05e-36,72;CL:0000473,9.28e-35,48;CL:0000234,9.28e-35,48;CL:0000738,4.06e-34,136;CL:0000557,9.56e-31,67;CL:0000839,1.16e-29,66;CL:0002009,2.61e-27,61;CL:0002031,1.55e-26,120;CL:0002194,1.56e-25,59;CL:0000576,1.56e-25,59;CL:0000040,1.56e-25,59;CL:0000559,1.56e-25,59;CL:0000037,2.72e-25,168;CL:0000988,2.52e-23,177;CL:0002087,4.32e-23,115;CL:0000763,5.08e-23,108;CL:0000049,5.08e-23,108;CL:0002032,2.51e-22,161;CL:0000837,2.51e-22,161;CL:0000048,5.41e-18,427;CL:0000034,3.50e-17,441;CL:0000723,4.12e-17,433;CL:0000134,9.39e-16,354;CL:0002320,1.12e-15,361;CL:0000219,1.47e-11,386;CL:0000094,4.25e-10,8;CL:0000081,3.02e-08,11;CL:0002393,4.66e-08,9;CL:0002397,4.66e-08,9;CL:0000624,3.32e-07,6|ontology_enrichment_development_v019=CL:0002057;2.64e-28;42!CL:0000049;6.97e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!4.30e-16!80;UBERON:0001474!3.45e-15!86;UBERON:0002390!1.28e-14!102;UBERON:0003061!1.28e-14!102;UBERON:0002193!1.46e-14!112;UBERON:0004765!6.02e-14!101;UBERON:0001434!6.02e-14!101;UBERON:0003081!5.09e-11!216;UBERON:0002405!1.02e-10!115;UBERON:0002204!3.59e-10!167;UBERON:0000926!1.27e-07!448;UBERON:0004120!1.27e-07!448;UBERON:0006603!1.27e-07!448;UBERON:0002384!8.97e-07!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.66e-28,76;UBERON:0001474,1.10e-26,82;UBERON:0004765,1.01e-25,90;UBERON:0002405,3.66e-25,93;UBERON:0002193,8.13e-25,108;UBERON:0002390,1.38e-24,98;UBERON:0003061,1.38e-24,98;UBERON:0001434,4.60e-23,100;UBERON:0003081,3.18e-17,203;UBERON:0002204,6.19e-16,167;UBERON:0002384,3.17e-14,371;UBERON:0000926,3.73e-13,315;UBERON:0004120,3.73e-13,315;UBERON:0006603,3.73e-13,315|phase1_expression=0.54503513781167,0.642301571672949,0.986680828671798,1.0007329835313,0,0,0,1.26343974685366,0.522371256399677,0.245733936501509,0,0,0.263766978228454,1.98026164736075,0.662794751455832,2.01697543935533,1.80808358407193,1.46062018077475,0.487932798790507,0,0,0,0,0.410623275218653,0,0,0,0.0787107813136792,11.0141997517693,13.0501995353052,12.0756576186539,0,0,0,0.309868802321207,0,1.17440175733939,23.2678071583389,18.8511780621933,22.3521196837327,0.447830948479849,0.32389366601898,0.515151135268373,4.9435401185052,4.1566353805769,3.63876091781724,5.81072592264212,6.98985409637104,9.91060386864331,11.507695692886,7.42866048934392,9.93225365532058,62.0542225325913,33.565203546359,51.4620649058499,9.03563229804502,3.82068610080984,14.8317499733756,56.625520088617,41.3998444928161,55.6223299445166,4.61791820261403,5.58498241340569,7.2458207590558,17.7027635563436,23.2627942123367,11.2108004819203,9.79869794501299,6.77927793946262,12.5969529928968,22.3997815974346,25.0428792471544,26.5828405450343,2.32380814943136,2.33864729961548,1.25795187305026,1.34794357375794,2.25265339262259,1.44653028027372,1.14005097496499,2.38700012638908,2.55729815270488,0,0.546138611262131,0.889509253863555,2.13365111283254,1.20118796110804,0,0,0,7.96898156753228,4.69789751496751,7.26319133437935,2.64342657158052,7.28661131875997,0.526768169550154,16.9170402297896,18.0784950864616,15.0089094269642,0.167186495390678,5.54067853277104,1.89379122293893,0,0,5.00830042707223,2.21533894583621,2.16643091012012,0,0.390178042679635,0.493313713811028,0,0.869409257205157,1.18629250529648,0.535081656179426,1.04535523804977,0.339928028092699,3.83220493601921,3.4362744548263,2.02415753615602,0.318565414324097,0,0,0.150575119077773,0,0,0.236777252044017,0,16.3301462012033,18.988253900629,19.1168213125295,0,3.35350429851818,0.383587685530591,0,0.50133791063589,1.15877215168659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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=26959 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23200 | |||
|TSSclassifier=S | |||
|UniProt=O60381 | |||
|association_with_transcript=10bp_to_ENST00000222574,NM_012257,uc003vdy.2_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_HBP1_5end | |||
|id=chr7:106809470..106809481,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.46e-24!42;CL:0000860!1.25e-22!45;CL:0000766!5.94e-22!76;CL:0000557!9.45e-19!71;CL:0000738!1.50e-18!140;CL:0000839!4.16e-18!70;CL:0002009!1.08e-16!65;CL:0002194!1.24e-15!63;CL:0000576!1.24e-15!63;CL:0000040!1.24e-15!63;CL:0000559!1.24e-15!63;CL:0002031!1.24e-13!124;CL:0000763!5.19e-12!112;CL:0000049!5.19e-12!112;CL:0002087!1.60e-11!119;CL:0000037!2.32e-11!172;CL:0000566!2.32e-11!172;CL:0000048!6.89e-10!430;CL:0002032!1.09e-09!165;CL:0000837!1.09e-09!165;CL:0000988!2.26e-09!182;CL:0000034!4.76e-09!444;CL:0000723!5.88e-09!436;CL:0000134!1.85e-08!358;CL:0002320!3.16e-08!365;CL:0000094!8.66e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.36e-29;33!CL:0002057;1.36e-29;33!CL:0000473;1.23e-21;39!CL:0000234;1.23e-21;39!CL:0000576;3.86e-20;48!CL:0000766;6.95e-18;69!CL:0000094;3.91e-10;8!CL:0002087;6.69e-09;104!CL:0000081;2.87e-08;11!CL:0000738;8.61e-08;136!CL:0000624;3.29e-07;6!CL:0000763;4.05e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.78e-39,42;CL:0002057,3.78e-39,42;CL:0000766,4.05e-36,72;CL:0000473,9.28e-35,48;CL:0000234,9.28e-35,48;CL:0000738,4.06e-34,136;CL:0000557,9.56e-31,67;CL:0000839,1.16e-29,66;CL:0002009,2.61e-27,61;CL:0002031,1.55e-26,120;CL:0002194,1.56e-25,59;CL:0000576,1.56e-25,59;CL:0000040,1.56e-25,59;CL:0000559,1.56e-25,59;CL:0000037,2.72e-25,168;CL:0000988,2.52e-23,177;CL:0002087,4.32e-23,115;CL:0000763,5.08e-23,108;CL:0000049,5.08e-23,108;CL:0002032,2.51e-22,161;CL:0000837,2.51e-22,161;CL:0000048,5.41e-18,427;CL:0000034,3.50e-17,441;CL:0000723,4.12e-17,433;CL:0000134,9.39e-16,354;CL:0002320,1.12e-15,361;CL:0000219,1.47e-11,386;CL:0000094,4.25e-10,8;CL:0000081,3.02e-08,11;CL:0002393,4.66e-08,9;CL:0002397,4.66e-08,9;CL:0000624,3.32e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;2.64e-28;42!CL:0000049;6.97e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.30e-16!80;UBERON:0001474!3.45e-15!86;UBERON:0002390!1.28e-14!102;UBERON:0003061!1.28e-14!102;UBERON:0002193!1.46e-14!112;UBERON:0004765!6.02e-14!101;UBERON:0001434!6.02e-14!101;UBERON:0003081!5.09e-11!216;UBERON:0002405!1.02e-10!115;UBERON:0002204!3.59e-10!167;UBERON:0000926!1.27e-07!448;UBERON:0004120!1.27e-07!448;UBERON:0006603!1.27e-07!448;UBERON:0002384!8.97e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.66e-28,76;UBERON:0001474,1.10e-26,82;UBERON:0004765,1.01e-25,90;UBERON:0002405,3.66e-25,93;UBERON:0002193,8.13e-25,108;UBERON:0002390,1.38e-24,98;UBERON:0003061,1.38e-24,98;UBERON:0001434,4.60e-23,100;UBERON:0003081,3.18e-17,203;UBERON:0002204,6.19e-16,167;UBERON:0002384,3.17e-14,371;UBERON:0000926,3.73e-13,315;UBERON:0004120,3.73e-13,315;UBERON:0006603,3.73e-13,315 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.986680828671798,1.0007329835313,0,0,0,1.26343974685366,0.522371256399677,0.245733936501509,0,0,0.263766978228454,1.98026164736075,0.662794751455832,2.01697543935533,1.80808358407193,1.46062018077475,0.487932798790507,0,0,0,0,0.410623275218653,0,0,0,0.0787107813136792,11.0141997517693,13.0501995353052,12.0756576186539,0,0,0,0.309868802321207,0,1.17440175733939,23.2678071583389,18.8511780621933,22.3521196837327,0.447830948479849,0.32389366601898,0.515151135268373,4.9435401185052,4.1566353805769,3.63876091781724,5.81072592264212,6.98985409637104,9.91060386864331,11.507695692886,7.42866048934392,9.93225365532058,62.0542225325913,33.565203546359,51.4620649058499,9.03563229804502,3.82068610080984,14.8317499733756,56.625520088617,41.3998444928161,55.6223299445166,4.61791820261403,5.58498241340569,7.2458207590558,17.7027635563436,23.2627942123367,11.2108004819203,9.79869794501299,6.77927793946262,12.5969529928968,22.3997815974346,25.0428792471544,26.5828405450343,2.32380814943136,2.33864729961548,1.25795187305026,1.34794357375794,2.25265339262259,1.44653028027372,1.14005097496499,2.38700012638908,2.55729815270488,0,0.546138611262131,0.889509253863555,2.13365111283254,1.20118796110804,0,0,0,7.96898156753228,4.69789751496751,7.26319133437935,2.64342657158052,7.28661131875997,0.526768169550154,16.9170402297896,18.0784950864616,15.0089094269642,0.167186495390678,5.54067853277104,1.89379122293893,0,0,5.00830042707223,2.21533894583621,2.16643091012012,0,0.390178042679635,0.493313713811028,0,0.869409257205157,1.18629250529648,0.535081656179426,1.04535523804977,0.339928028092699,3.83220493601921,3.4362744548263,2.02415753615602,0.318565414324097,0,0,0.150575119077773,0,0,0.236777252044017,0,16.3301462012033,18.988253900629,19.1168213125295,0,3.35350429851818,0.383587685530591,0,0.50133791063589,1.15877215168659,0,0.973269740605272,0.283604451492204,0.665188192387692,1.05401742831751,0.523916301990851,0,0,0.324547393654683,0.174129737299267,0.797747763113191,1.66943437013739,2.28797964312051,1.48583000531826,1.98762407366705,0.860234595106124,0.347140501607594,1.13061588384802,2.93649605346934,0.550236083880135,1.25396979922086,0.775250277507987,2.13459757612026,1.00416183829401,0.805658634218294,1.52054421143703,0.732186172644509,0.367663080345869,0.81014194788176,0.535798369704479,0,0.675668882899933,1.53316637465883,1.89853131913626,1.46561395144326,50.076558625704,54.2892369807656,0,0,0.759783069987479,4.63432132846266,1.72101972449288,0,0,1.06748995729705,0.98667019366864,0.933633106199299,0.808264032418128,0.326923806226917,0.151357427644931,0,0,0.312160076830321,0,0.448346041655403,0,0,0,0.204154171254893,0.122834317311768,0.929932030581889,1.18800285728205,0.989067717114227,0,0,0,0.375355559615893,0,0.438977620880838,0.30648779579902,1.65261864797256,0.794025282120147,0.538168907066586,0.427114777637135,0.211931901159562,0.300091096084402,0.206105058476878,0.257640540045629,0.558350568994769,0.506328996723799,0.194874010322397,0.252433774244115,0,0.80823028409406,0.710019185033229,0.10075209822764,0,1.35282597214308,1.36373060295417,0.286804595389004,0.121973706129595,0.132529768321485,0.232387885739037,0.414644220061482,0,0,1.56449532329816,0.643240938192885,0,0.464367928031979,1.44375896333917,0.473227200159376,0.337169380156203,0.241011029883482,0.55146986366197,0.653638332277218,0.237270619111097,0.269662616320329,0,0.38474715694639,0,0,0,0,2.53510069643662,0,0,0.441463099414651,0.491953754172454,0.514703430895577,0.219500570817251,0,0,0.0925884451585296,0,0,0,0.115930404975077,1.76113041353732,1.29929802984966,1.85194205030644,2.66355813128438,0,0.858486162094873,0.984868024349589,0,0.148631162288728,4.68669169933885,0.335964256397719,0.283550194484773,0,0.290633938513962,0,30.0524575116526,0.176096868026452,6.01251535068239,2.73827911492227,6.312121671319,0.253991577168676,0,0,0,0,0.901029173531752,0.857479297891735,0,0,0,1.29271715757778,0,0,0.797814349754612,0,0,0,0,0,0.542621605391443,0,0,0.710783897485092,0,2.1100756394171,1.74306691720059,1.79951384127703,1.2162378064119,1.00451418286425,0,0,0,0,1.30303176000821,1.2328579353023,0.358121926479791,0.336255431980582,14.5802762549426,17.8970887133399,17.326309897766,0.254094624222463,0,0,0.335032530668698,0.637938751653163,29.9602809578873,26.9245313283622,32.7388255614468,1.34960640891054,0,0.271265023699736,1.03985430765404,0.713715955188647,0.315404830067869,0.117141414992713,0.300946099727719,2.27407504055985,1.03473071292505,0,0.921845842708516,0.695068915744663,0,0,3.72182447021197,15.5314224589404,6.61710858381355,0.606255142892519,0,0,1.48864684691266,1.84154367945675,0.841980283299221,1.53766979106841,0.511707249066704,1.28683136914886,0,0,0.532685175939381,0.246381468041427,0,0,0.362578348774867,1.20303882181971,0.184161977871793,1.37777337797528,0.728364672026868,1.83574180943194,0,0.0770153371044148,0,0,0.422206515571503,0,0,1.29549549661284,0,0,0.501689773854853,0,0,0,2.85037839639715,2.3529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| |||
|short_description=p2@HBP1 | |||
}} |
Revision as of 22:38, 13 September 2013
Short description: | p2@HBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_HBP1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 10bp_to_ENST00000222574, NM_012257, uc003vdy.2_5end |
EntrezGene: | HBP1 |
HGNC: | 23200 |
UniProt: | O60381 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.66e-28 | 76 |
bone element | 1.10e-26 | 82 |
skeletal element | 1.01e-25 | 90 |
immune system | 3.66e-25 | 93 |
hemolymphoid system | 8.13e-25 | 108 |
hematopoietic system | 1.38e-24 | 98 |
blood island | 1.38e-24 | 98 |
skeletal system | 4.60e-23 | 100 |
lateral plate mesoderm | 3.18e-17 | 203 |
musculoskeletal system | 6.19e-16 | 167 |
connective tissue | 3.17e-14 | 371 |
mesoderm | 3.73e-13 | 315 |
mesoderm-derived structure | 3.73e-13 | 315 |
presumptive mesoderm | 3.73e-13 | 315 |
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