FFCP PHASE1:Mm9::chr2:153968616..153968621,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18843|HGNC=|MCL_coexpression_id=147|UniProt=P97361,A2AIF7|association_with_transcript=0bp_to_ENSMUST00000028985,NM_011126,uc008niu.2_5end|description=CAGE_peak_1_at_Bpifa1_5end|id=chr2:153968616..153968621,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000065!6.87e-15!41;UBERON:0001004!2.45e-14!42;UBERON:0005178!1.00e-09!17;UBERON:0005181!1.00e-09!17;UBERON:0002224!1.00e-09!17;UBERON:0000915!1.00e-09!17;UBERON:0008947!1.00e-09!17;UBERON:0003258!1.00e-09!17;UBERON:0000072!1.97e-09!27;UBERON:0002370!4.06e-07!23;UBERON:0000974!4.06e-07!23;UBERON:0004807!4.06e-07!23;UBERON:0005058!4.06e-07!23;UBERON:0003351!4.06e-07!23;UBERON:0009113!4.06e-07!23;UBERON:0003295!4.06e-07!23;UBERON:0009722!4.06e-07!23;UBERON:0005562!4.06e-07!23;UBERON:0007690!4.06e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0000065,5.65e-14,41;UBERON:0001004,1.77e-13,42;UBERON:0000072,4.41e-11,27;UBERON:0002370,2.41e-08,23;UBERON:0000974,2.41e-08,23;UBERON:0004807,2.41e-08,23;UBERON:0005058,2.41e-08,23;UBERON:0003351,2.41e-08,23;UBERON:0009113,2.41e-08,23;UBERON:0003295,2.41e-08,23;UBERON:0009722,2.41e-08,23;UBERON:0005562,2.41e-08,23;UBERON:0007690,2.41e-08,23;UBERON:0006562,7.44e-08,24;UBERON:0003408,7.44e-08,24;UBERON:0001557,7.44e-08,24;UBERON:0001042,7.44e-08,24;UBERON:0008814,7.44e-08,24;UBERON:0009145,7.44e-08,24;UBERON:0005178,3.40e-07,17;UBERON:0005181,3.40e-07,17;UBERON:0002224,3.40e-07,17;UBERON:0000915,3.40e-07,17;UBERON:0008947,3.40e-07,17;UBERON:0003258,3.40e-07,17|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,129.350844319777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,59.6888785559945,0,0,0,0,0,0,0,92.6581655527996,87.409153588909,88.4667778775871,6.96521666286266,0,0,1.38788261412909,0,0,0,0,0,0,0.578397427679647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9591626318643,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.350296027101508,0,0.164167464079095,0.162137619091711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744281895337007,0,0,0,0,333.110001870388,0,0,0.169745085775188,0,0.335012514883631,0,1.17080188714679,0.472905432318573,2.21464689648775,2.87018583583477,115.523636874595,110.000333448575,166.201768310157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8940673841212,0,0,0,0,5.35106452806212,6.41741180348272,1.2178597964584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.068811805857,30.2060570782345,50.533790925095,46.6415754490284,24.8847106977799,25.4312134120019,6.73094517311826,5.90758108698309,3.12995994839258,3.12447907285499,3.12561173924206,7.79663045918019,1.6356013078856,1.8700304349051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.16038732188782,1.04806581313991,5.51530525350042,16.8907513129228,9.88968274746692,14.7622836412235,13.6456494352451,10.3926512954998,12.6379648728671,13.7653015980727,15.173961119954,12.6358031702349,15.7176918123414,11.7043169204304,14.6611007552416,23.0768104449852,16.7806768953213,12.343293085875,16.3277741666591,11.6833733074187,14.2439488299682,14.0222976818843,14.2152541258017,12.9878860739669,14.7319038405192,13.9878237261238,12.906272248128,13.1684870117833,13.0025916735744,18.0061658994663,12.8597578184352,11.1885834369062,31.9757539760571,14.5037597236153,19.3383948643468,0,0,0.231867835620421|short_description=p1@Bpifa1}} | ||
|EntrezGene=18843 | |||
|HGNC= | |||
|MCL_coexpression_id=147 | |||
|UniProt=P97361,A2AIF7 | |||
|association_with_transcript=0bp_to_ENSMUST00000028985,NM_011126,uc008niu.2_5end | |||
|description=CAGE_peak_1_at_Bpifa1_5end | |||
|id=chr2:153968616..153968621,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!6.87e-15!41;UBERON:0001004!2.45e-14!42;UBERON:0005178!1.00e-09!17;UBERON:0005181!1.00e-09!17;UBERON:0002224!1.00e-09!17;UBERON:0000915!1.00e-09!17;UBERON:0008947!1.00e-09!17;UBERON:0003258!1.00e-09!17;UBERON:0000072!1.97e-09!27;UBERON:0002370!4.06e-07!23;UBERON:0000974!4.06e-07!23;UBERON:0004807!4.06e-07!23;UBERON:0005058!4.06e-07!23;UBERON:0003351!4.06e-07!23;UBERON:0009113!4.06e-07!23;UBERON:0003295!4.06e-07!23;UBERON:0009722!4.06e-07!23;UBERON:0005562!4.06e-07!23;UBERON:0007690!4.06e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000065,5.65e-14,41;UBERON:0001004,1.77e-13,42;UBERON:0000072,4.41e-11,27;UBERON:0002370,2.41e-08,23;UBERON:0000974,2.41e-08,23;UBERON:0004807,2.41e-08,23;UBERON:0005058,2.41e-08,23;UBERON:0003351,2.41e-08,23;UBERON:0009113,2.41e-08,23;UBERON:0003295,2.41e-08,23;UBERON:0009722,2.41e-08,23;UBERON:0005562,2.41e-08,23;UBERON:0007690,2.41e-08,23;UBERON:0006562,7.44e-08,24;UBERON:0003408,7.44e-08,24;UBERON:0001557,7.44e-08,24;UBERON:0001042,7.44e-08,24;UBERON:0008814,7.44e-08,24;UBERON:0009145,7.44e-08,24;UBERON:0005178,3.40e-07,17;UBERON:0005181,3.40e-07,17;UBERON:0002224,3.40e-07,17;UBERON:0000915,3.40e-07,17;UBERON:0008947,3.40e-07,17;UBERON:0003258,3.40e-07,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,129.350844319777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,59.6888785559945,0,0,0,0,0,0,0,92.6581655527996,87.409153588909,88.4667778775871,6.96521666286266,0,0,1.38788261412909,0,0,0,0,0,0,0.578397427679647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9591626318643,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.350296027101508,0,0.164167464079095,0.162137619091711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744281895337007,0,0,0,0,333.110001870388,0,0,0.169745085775188,0,0.335012514883631,0,1.17080188714679,0.472905432318573,2.21464689648775,2.87018583583477,115.523636874595,110.000333448575,166.201768310157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8940673841212,0,0,0,0,5.35106452806212,6.41741180348272,1.2178597964584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.068811805857,30.2060570782345,50.533790925095,46.6415754490284,24.8847106977799,25.4312134120019,6.73094517311826,5.90758108698309,3.12995994839258,3.12447907285499,3.12561173924206,7.79663045918019,1.6356013078856,1.8700304349051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.16038732188782,1.04806581313991,5.51530525350042,16.8907513129228,9.88968274746692,14.7622836412235,13.6456494352451,10.3926512954998,12.6379648728671,13.7653015980727,15.173961119954,12.6358031702349,15.7176918123414,11.7043169204304,14.6611007552416,23.0768104449852,16.7806768953213,12.343293085875,16.3277741666591,11.6833733074187,14.2439488299682,14.0222976818843,14.2152541258017,12.9878860739669,14.7319038405192,13.9878237261238,12.906272248128,13.1684870117833,13.0025916735744,18.0061658994663,12.8597578184352,11.1885834369062,31.9757539760571,14.5037597236153,19.3383948643468,0,0,0.231867835620421 | |||
|short_description=p1@Bpifa1 | |||
}} |
Revision as of 22:31, 13 September 2013
Short description: | p1@Bpifa1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Bpifa1_5end |
Coexpression cluster: | MCL_coexpression_mm9:147 |
Association with transcript: | 0bp_to_ENSMUST00000028985, NM_011126, uc008niu.2_5end |
EntrezGene: | Bpifa1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory tract | 5.65e-14 | 41 |
respiratory system | 1.77e-13 | 42 |
segment of respiratory tract | 4.41e-11 | 27 |
thymus | 2.41e-08 | 23 |
neck | 2.41e-08 | 23 |
respiratory system epithelium | 2.41e-08 | 23 |
hemolymphoid system gland | 2.41e-08 | 23 |
pharyngeal epithelium | 2.41e-08 | 23 |
thymic region | 2.41e-08 | 23 |
pharyngeal gland | 2.41e-08 | 23 |
entire pharyngeal arch endoderm | 2.41e-08 | 23 |
thymus primordium | 2.41e-08 | 23 |
early pharyngeal endoderm | 2.41e-08 | 23 |
pharynx | 7.44e-08 | 24 |
gland of gut | 7.44e-08 | 24 |
upper respiratory tract | 7.44e-08 | 24 |
chordate pharynx | 7.44e-08 | 24 |
pharyngeal arch system | 7.44e-08 | 24 |
pharyngeal region of foregut | 7.44e-08 | 24 |
thoracic cavity element | 3.40e-07 | 17 |
thoracic segment organ | 3.40e-07 | 17 |
thoracic cavity | 3.40e-07 | 17 |
thoracic segment of trunk | 3.40e-07 | 17 |
respiratory primordium | 3.40e-07 | 17 |
endoderm of foregut | 3.40e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.