FFCP PHASE1:Mm9::chr2:153800642..153800671,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=545477|HGNC=|MCL_coexpression_id=28|UniProt=Q0VGU8|association_with_transcript=-9bp_to_ENSMUST00000109753,NM_001080811,uc008nir.1_5end|description=CAGE_peak_1_at_Bpifa6_5end|id=chr2:153800642..153800671,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001444!2.75e-20!11;UBERON:0000020!1.29e-18!12;UBERON:0001032!1.29e-18!12;UBERON:0004456!1.29e-18!12;UBERON:0000970!3.87e-16!9;UBERON:0000019!3.87e-16!9;UBERON:0000047!3.87e-16!9;UBERON:0004088!3.87e-16!9;UBERON:0002104!3.87e-16!9;UBERON:0001456!3.87e-16!9;UBERON:0003072!3.87e-16!9;UBERON:0003071!3.87e-16!9;UBERON:0004128!3.87e-16!9;UBERON:0005085!2.74e-11!13;UBERON:0001723!3.04e-10!1;UBERON:0001033!3.04e-10!1;UBERON:0010056!3.04e-10!1;UBERON:0001255!5.62e-10!1;UBERON:0001556!5.62e-10!1;UBERON:0000993!6.88e-10!1;UBERON:0000161!5.54e-08!5|ontology_enrichment_uberon_v019_2=UBERON:0001444,6.81e-26,11;UBERON:0000020,8.30e-24,12;UBERON:0001032,8.30e-24,12;UBERON:0004456,8.30e-24,12;UBERON:0000033,4.84e-22,13;UBERON:0001723,1.74e-18,1;UBERON:0001033,1.74e-18,1;UBERON:0010056,1.74e-18,1;UBERON:0000970,3.01e-18,9;UBERON:0000019,3.01e-18,9;UBERON:0000047,3.01e-18,9;UBERON:0010312,3.01e-18,9;UBERON:0004088,3.01e-18,9;UBERON:0002104,3.01e-18,9;UBERON:0001456,3.01e-18,9;UBERON:0003072,3.01e-18,9;UBERON:0004128,3.01e-18,9;UBERON:0003071,3.01e-18,9;UBERON:0005085,6.61e-13,13;UBERON:0000165,6.19e-10,2;UBERON:0000166,6.19e-10,2;UBERON:0000930,6.19e-10,2;UBERON:0007811,2.09e-08,36;UBERON:0000153,3.94e-07,43|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,237.070181182397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521472960576829,0,0,0,0,0,0,29841.0760484138,0,0,0,0,0,0.12811372028485,2.99845518591132,9679.64531957101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.98806843953465,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Bpifa6}} | ||
|EntrezGene=545477 | |||
|HGNC= | |||
|MCL_coexpression_id=28 | |||
|UniProt=Q0VGU8 | |||
|association_with_transcript=-9bp_to_ENSMUST00000109753,NM_001080811,uc008nir.1_5end | |||
|description=CAGE_peak_1_at_Bpifa6_5end | |||
|id=chr2:153800642..153800671,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001444!2.75e-20!11;UBERON:0000020!1.29e-18!12;UBERON:0001032!1.29e-18!12;UBERON:0004456!1.29e-18!12;UBERON:0000970!3.87e-16!9;UBERON:0000019!3.87e-16!9;UBERON:0000047!3.87e-16!9;UBERON:0004088!3.87e-16!9;UBERON:0002104!3.87e-16!9;UBERON:0001456!3.87e-16!9;UBERON:0003072!3.87e-16!9;UBERON:0003071!3.87e-16!9;UBERON:0004128!3.87e-16!9;UBERON:0005085!2.74e-11!13;UBERON:0001723!3.04e-10!1;UBERON:0001033!3.04e-10!1;UBERON:0010056!3.04e-10!1;UBERON:0001255!5.62e-10!1;UBERON:0001556!5.62e-10!1;UBERON:0000993!6.88e-10!1;UBERON:0000161!5.54e-08!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001444,6.81e-26,11;UBERON:0000020,8.30e-24,12;UBERON:0001032,8.30e-24,12;UBERON:0004456,8.30e-24,12;UBERON:0000033,4.84e-22,13;UBERON:0001723,1.74e-18,1;UBERON:0001033,1.74e-18,1;UBERON:0010056,1.74e-18,1;UBERON:0000970,3.01e-18,9;UBERON:0000019,3.01e-18,9;UBERON:0000047,3.01e-18,9;UBERON:0010312,3.01e-18,9;UBERON:0004088,3.01e-18,9;UBERON:0002104,3.01e-18,9;UBERON:0001456,3.01e-18,9;UBERON:0003072,3.01e-18,9;UBERON:0004128,3.01e-18,9;UBERON:0003071,3.01e-18,9;UBERON:0005085,6.61e-13,13;UBERON:0000165,6.19e-10,2;UBERON:0000166,6.19e-10,2;UBERON:0000930,6.19e-10,2;UBERON:0007811,2.09e-08,36;UBERON:0000153,3.94e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,237.070181182397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521472960576829,0,0,0,0,0,0,29841.0760484138,0,0,0,0,0,0.12811372028485,2.99845518591132,9679.64531957101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.98806843953465,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Bpifa6 | |||
}} |
Revision as of 22:30, 13 September 2013
Short description: | p1@Bpifa6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Bpifa6_5end |
Coexpression cluster: | MCL_coexpression_mm9:28 |
Association with transcript: | -9bp_to_ENSMUST00000109753, NM_001080811, uc008nir.1_5end |
EntrezGene: | Bpifa6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subdivision of head | 6.81e-26 | 11 |
sense organ | 8.30e-24 | 12 |
sensory system | 8.30e-24 | 12 |
entire sense organ system | 8.30e-24 | 12 |
head | 4.84e-22 | 13 |
tongue | 1.74e-18 | 1 |
gustatory system | 1.74e-18 | 1 |
future tongue | 1.74e-18 | 1 |
eye | 3.01e-18 | 9 |
camera-type eye | 3.01e-18 | 9 |
simple eye | 3.01e-18 | 9 |
immature eye | 3.01e-18 | 9 |
ocular region | 3.01e-18 | 9 |
visual system | 3.01e-18 | 9 |
face | 3.01e-18 | 9 |
optic cup | 3.01e-18 | 9 |
optic vesicle | 3.01e-18 | 9 |
eye primordium | 3.01e-18 | 9 |
ectodermal placode | 6.61e-13 | 13 |
mouth | 6.19e-10 | 2 |
oral opening | 6.19e-10 | 2 |
stomodeum | 6.19e-10 | 2 |
craniocervical region | 2.09e-08 | 36 |
anterior region of body | 3.94e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.