FFCP PHASE1:Mm9::chr2:129418970..129418994,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19261|HGNC=|MCL_coexpression_id=2|UniProt=E9QPT7,Q6P6I8|association_with_transcript=29bp_to_ENSMUST00000099113,ENSMUST00000103202_5end|description=CAGE_peak_6_at_Sirpa_5end|id=chr2:129418970..129418994,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,5.98e-10,23;CL:0000337,5.98e-10,23;CL:0002194,6.79e-07,4;CL:0000766,6.79e-07,4;CL:0000234,6.79e-07,4;CL:0000576,6.79e-07,4;CL:0000235,6.79e-07,4;CL:0000864,6.79e-07,4;CL:0002009,6.79e-07,4;CL:0000040,6.79e-07,4;CL:0000559,6.79e-07,4|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.21e-18!63;UBERON:0001049!1.88e-18!52;UBERON:0005068!1.88e-18!52;UBERON:0006241!1.88e-18!52;UBERON:0007135!1.88e-18!52;UBERON:0000955!5.09e-18!50;UBERON:0006238!5.09e-18!50;UBERON:0002616!2.40e-17!49;UBERON:0001017!6.49e-16!73;UBERON:0005743!6.49e-16!73;UBERON:0000073!2.13e-15!75;UBERON:0001016!2.13e-15!75;UBERON:0002346!3.19e-15!71;UBERON:0003075!3.19e-15!71;UBERON:0007284!3.19e-15!71;UBERON:0003056!1.38e-14!49;UBERON:0002020!3.39e-14!34;UBERON:0004121!8.31e-14!102;UBERON:0000924!8.31e-14!102;UBERON:0006601!8.31e-14!102;UBERON:0003080!9.69e-14!40;UBERON:0002780!3.61e-13!39;UBERON:0001890!3.61e-13!39;UBERON:0006240!3.61e-13!39;UBERON:0002791!8.41e-12!29;UBERON:0003528!8.41e-12!29;UBERON:0001893!8.41e-12!29;UBERON:0007811!2.57e-10!86;UBERON:0000153!2.89e-10!94;UBERON:0002619!3.35e-09!17;UBERON:0002021!1.00e-08!10;UBERON:0000411!1.00e-08!10;UBERON:0001950!1.00e-08!10;UBERON:0000956!8.93e-08!21;UBERON:0001869!8.93e-08!21;UBERON:0000203!8.93e-08!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.40e-30,54;UBERON:0001017,2.79e-27,73;UBERON:0001049,3.26e-27,52;UBERON:0005068,3.26e-27,52;UBERON:0006241,3.26e-27,52;UBERON:0007135,3.26e-27,52;UBERON:0001016,2.92e-26,75;UBERON:0002020,1.71e-23,34;UBERON:0000955,2.39e-23,47;UBERON:0006238,2.39e-23,47;UBERON:0002346,3.45e-23,64;UBERON:0003075,3.45e-23,64;UBERON:0007284,3.45e-23,64;UBERON:0002616,5.05e-22,46;UBERON:0004121,9.30e-21,95;UBERON:0000924,9.30e-21,95;UBERON:0006601,9.30e-21,95;UBERON:0003528,2.09e-19,29;UBERON:0002791,2.09e-19,29;UBERON:0001893,2.09e-19,29;UBERON:0010371,3.95e-19,73;UBERON:0003080,6.81e-19,40;UBERON:0002021,2.92e-18,10;UBERON:0000411,2.92e-18,10;UBERON:0001950,2.92e-18,10;UBERON:0002780,9.63e-18,39;UBERON:0001890,9.63e-18,39;UBERON:0006240,9.63e-18,39;UBERON:0003056,8.77e-17,49;UBERON:0010314,3.94e-14,92;UBERON:0002619,1.05e-11,17;UBERON:0002420,9.06e-11,8;UBERON:0007245,9.06e-11,8;UBERON:0010009,9.06e-11,8;UBERON:0010011,9.06e-11,8;UBERON:0000454,9.06e-11,8;UBERON:0000956,9.13e-11,21;UBERON:0001869,9.13e-11,21;UBERON:0000203,9.13e-11,21;UBERON:0003076,6.78e-09,12;UBERON:0003057,6.78e-09,12;UBERON:0000025,7.06e-09,114;UBERON:0004111,1.01e-07,122;UBERON:0000369,2.87e-07,5;UBERON:0002435,2.87e-07,5;UBERON:0000204,2.87e-07,5;UBERON:0010082,2.87e-07,5|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.157731082679119,0,0,2.72138528483423,0.198581902401771,0.261199789138935,0,0,0.57423196411502,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0.7813353445238,2.09409497589519,1.76469446409304,1.36609096991689,1.45653105909346,0.503587271902309,0.202753862439029,0.183546752161682,0,0.65407546914134,0.439372365468944,0.58328969722285,0.419959264876088,0,0,0,0,0.257259436035947,0.286533439938757,1.03134418455488,0.404632921719196,1.05798195854407,0,0,0.889294796111139,4.04954872776629,7.9109309005358,2.8419204597844,2.69640099466564,2.68952813725088,0.207379224616955,0,0,3.42781181284564,3.75476519617743,0.244981598429908,0.0958454710182364,0.919218786610021,12.1127469099328,7.53355294702608,4.91540906419979,2.1101806036831,2.65314166446988,1.04182674111352,1.95428099300967,2.25105044012672,2.90316670775939,3.83017161115768,2.27794689278565,0.372798891650601,0.075726193333184,0.0755715601067855,1.44932244350839,0,0,0,0,0,0.561777680527007,0,0,0.70667914902068,0.281686839553361,0,0,0,0,0,0,0.45673551887624,0.776813650941515,0.148442139064825,0.346970653532272,0.304465478312141,0,0,0.23517741427141,0,0,0.144599356919912,0,0.323533699894818,0.220841518460394,0,0,2.92780797011547,5.65506108396329,0,0.599075622529601,0,0.635351135365324,3.59497534571574,18.3000241127451,1.25654352112864,34.0695667576862,28.8958466783273,4.1557608911912,9.73447578406546,0.305518091550949,0,0,0.210441855886474,1.04096354370163,0.459804208866946,0,0.30140963567143,0.340182495756639,0.384341160854549,0.468508622798644,1.81092359517311,0,0.378212160335639,0.351902248327898,0.876782929710299,0,0.348252166522167,0,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0.233530684734339,0,0,0.162137619091711,0.146199987425332,0,0.134206418760372,14.7202963994889,0.411618449517138,0,0,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0,0.397912944082302,0,0,0,0,0,0.114248512609729,0,0,0,0.280543279561274,0.442655759869801,0.295220295959204,0.31399745568275,0.370191491765402,0.29645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| ||
|EntrezGene=19261 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=E9QPT7,Q6P6I8 | |||
|association_with_transcript=29bp_to_ENSMUST00000099113,ENSMUST00000103202_5end | |||
|description=CAGE_peak_6_at_Sirpa_5end | |||
|id=chr2:129418970..129418994,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.98e-10,23;CL:0000337,5.98e-10,23;CL:0002194,6.79e-07,4;CL:0000766,6.79e-07,4;CL:0000234,6.79e-07,4;CL:0000576,6.79e-07,4;CL:0000235,6.79e-07,4;CL:0000864,6.79e-07,4;CL:0002009,6.79e-07,4;CL:0000040,6.79e-07,4;CL:0000559,6.79e-07,4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.21e-18!63;UBERON:0001049!1.88e-18!52;UBERON:0005068!1.88e-18!52;UBERON:0006241!1.88e-18!52;UBERON:0007135!1.88e-18!52;UBERON:0000955!5.09e-18!50;UBERON:0006238!5.09e-18!50;UBERON:0002616!2.40e-17!49;UBERON:0001017!6.49e-16!73;UBERON:0005743!6.49e-16!73;UBERON:0000073!2.13e-15!75;UBERON:0001016!2.13e-15!75;UBERON:0002346!3.19e-15!71;UBERON:0003075!3.19e-15!71;UBERON:0007284!3.19e-15!71;UBERON:0003056!1.38e-14!49;UBERON:0002020!3.39e-14!34;UBERON:0004121!8.31e-14!102;UBERON:0000924!8.31e-14!102;UBERON:0006601!8.31e-14!102;UBERON:0003080!9.69e-14!40;UBERON:0002780!3.61e-13!39;UBERON:0001890!3.61e-13!39;UBERON:0006240!3.61e-13!39;UBERON:0002791!8.41e-12!29;UBERON:0003528!8.41e-12!29;UBERON:0001893!8.41e-12!29;UBERON:0007811!2.57e-10!86;UBERON:0000153!2.89e-10!94;UBERON:0002619!3.35e-09!17;UBERON:0002021!1.00e-08!10;UBERON:0000411!1.00e-08!10;UBERON:0001950!1.00e-08!10;UBERON:0000956!8.93e-08!21;UBERON:0001869!8.93e-08!21;UBERON:0000203!8.93e-08!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.40e-30,54;UBERON:0001017,2.79e-27,73;UBERON:0001049,3.26e-27,52;UBERON:0005068,3.26e-27,52;UBERON:0006241,3.26e-27,52;UBERON:0007135,3.26e-27,52;UBERON:0001016,2.92e-26,75;UBERON:0002020,1.71e-23,34;UBERON:0000955,2.39e-23,47;UBERON:0006238,2.39e-23,47;UBERON:0002346,3.45e-23,64;UBERON:0003075,3.45e-23,64;UBERON:0007284,3.45e-23,64;UBERON:0002616,5.05e-22,46;UBERON:0004121,9.30e-21,95;UBERON:0000924,9.30e-21,95;UBERON:0006601,9.30e-21,95;UBERON:0003528,2.09e-19,29;UBERON:0002791,2.09e-19,29;UBERON:0001893,2.09e-19,29;UBERON:0010371,3.95e-19,73;UBERON:0003080,6.81e-19,40;UBERON:0002021,2.92e-18,10;UBERON:0000411,2.92e-18,10;UBERON:0001950,2.92e-18,10;UBERON:0002780,9.63e-18,39;UBERON:0001890,9.63e-18,39;UBERON:0006240,9.63e-18,39;UBERON:0003056,8.77e-17,49;UBERON:0010314,3.94e-14,92;UBERON:0002619,1.05e-11,17;UBERON:0002420,9.06e-11,8;UBERON:0007245,9.06e-11,8;UBERON:0010009,9.06e-11,8;UBERON:0010011,9.06e-11,8;UBERON:0000454,9.06e-11,8;UBERON:0000956,9.13e-11,21;UBERON:0001869,9.13e-11,21;UBERON:0000203,9.13e-11,21;UBERON:0003076,6.78e-09,12;UBERON:0003057,6.78e-09,12;UBERON:0000025,7.06e-09,114;UBERON:0004111,1.01e-07,122;UBERON:0000369,2.87e-07,5;UBERON:0002435,2.87e-07,5;UBERON:0000204,2.87e-07,5;UBERON:0010082,2.87e-07,5 | |||
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|short_description=p6@Sirpa | |||
}} |
Revision as of 22:03, 13 September 2013
Short description: | p6@Sirpa |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Sirpa_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 29bp_to_ENSMUST00000099113, ENSMUST00000103202_5end |
EntrezGene: | Sirpa |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.98e-10 | 23 |
neuroblast (sensu Vertebrata) | 5.98e-10 | 23 |
monopoietic cell | 6.79e-07 | 4 |
myeloid leukocyte | 6.79e-07 | 4 |
phagocyte | 6.79e-07 | 4 |
monocyte | 6.79e-07 | 4 |
macrophage | 6.79e-07 | 4 |
tissue-resident macrophage | 6.79e-07 | 4 |
macrophage dendritic cell progenitor | 6.79e-07 | 4 |
monoblast | 6.79e-07 | 4 |
promonocyte | 6.79e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.